RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
VPS11-205ENST00000534551 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
VPS11-205ENST00000534551 CCDC87Q9NVE4 849 aa18.36■□□□□ 0.53
VPS11-205ENST00000534551 SOS1Q07889 1333 aaPredicted RBP18.35■□□□□ 0.53
VPS11-205ENST00000534551 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
VPS11-205ENST00000534551 SSFA2P28290 1259 aa18.34■□□□□ 0.53
VPS11-205ENST00000534551 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
VPS11-205ENST00000534551 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
VPS11-205ENST00000534551 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
VPS11-205ENST00000534551 RTCBQ9Y3I0 505 aaKnown RBP18.34■□□□□ 0.53
VPS11-205ENST00000534551 COL15A1P39059 1388 aa18.33■□□□□ 0.53
VPS11-205ENST00000534551 CHL1O00533 1208 aa18.33■□□□□ 0.52
VPS11-205ENST00000534551 RPS6KA4O75676 772 aa18.33■□□□□ 0.52
VPS11-205ENST00000534551 A1BGP04217 495 aa18.33■□□□□ 0.52
VPS11-205ENST00000534551 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
VPS11-205ENST00000534551 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
VPS11-205ENST00000534551 SNRPA1P09661 255 aaKnown RBP18.32■□□□□ 0.52
VPS11-205ENST00000534551 PTGER2P43116 358 aa18.32■□□□□ 0.52
VPS11-205ENST00000534551 MTFR1LQ9H019 292 aa18.32■□□□□ 0.52
VPS11-205ENST00000534551 SRP68Q9UHB9 627 aaKnown RBP18.32■□□□□ 0.52
VPS11-205ENST00000534551 ZNF853P0CG23 659 aa18.31■□□□□ 0.52
VPS11-205ENST00000534551 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
VPS11-205ENST00000534551 ARHGEF1Q92888 912 aaKnown RBP18.31■□□□□ 0.52
VPS11-205ENST00000534551 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
VPS11-205ENST00000534551 ZNF330Q9Y3S2 320 aaPredicted RBP18.31■□□□□ 0.52
VPS11-205ENST00000534551 STARD3NLO95772 234 aa18.3■□□□□ 0.52
VPS11-205ENST00000534551 CFAP44Q96MT7 982 aa18.3■□□□□ 0.52
VPS11-205ENST00000534551 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
VPS11-205ENST00000534551 IFT57Q9NWB7 429 aa18.3■□□□□ 0.52
VPS11-205ENST00000534551 AFDNP55196 1824 aaKnown RBP18.29■□□□□ 0.52
VPS11-205ENST00000534551 SPON1Q9HCB6 807 aa18.29■□□□□ 0.52
VPS11-205ENST00000534551 NBPF26B4DH59 902 aa18.28■□□□□ 0.52
VPS11-205ENST00000534551 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
VPS11-205ENST00000534551 NBPF10Q6P3W6 841 aaKnown RBP18.28■□□□□ 0.52
VPS11-205ENST00000534551 NBPF15Q8N660 670 aa18.28■□□□□ 0.52
VPS11-205ENST00000534551 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
VPS11-205ENST00000534551 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
VPS11-205ENST00000534551 BABAM1Q9NWV8 329 aa18.28■□□□□ 0.52
VPS11-205ENST00000534551 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.52
VPS11-205ENST00000534551 ADRA2BP18089 450 aa18.27■□□□□ 0.52
VPS11-205ENST00000534551 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
VPS11-205ENST00000534551 TEX13AQ9BXU3 409 aaPredicted RBP18.27■□□□□ 0.52
VPS11-205ENST00000534551 NUP98P52948 1817 aa18.27■□□□□ 0.52
VPS11-205ENST00000534551 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
VPS11-205ENST00000534551 ANXA1P04083 346 aa18.26■□□□□ 0.51
VPS11-205ENST00000534551 EIF2S2P20042 333 aaKnown RBP18.26■□□□□ 0.51
VPS11-205ENST00000534551 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
VPS11-205ENST00000534551 RFC4P35249 363 aa18.26■□□□□ 0.51
VPS11-205ENST00000534551 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
VPS11-205ENST00000534551 GNAI1P63096 354 aa18.26■□□□□ 0.51
VPS11-205ENST00000534551 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
VPS11-205ENST00000534551 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
VPS11-205ENST00000534551 GYS1P13807 737 aa18.25■□□□□ 0.51
VPS11-205ENST00000534551 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
VPS11-205ENST00000534551 SLC16A10Q8TF71 515 aa18.25■□□□□ 0.51
VPS11-205ENST00000534551 KIAA1551Q9HCM1 1747 aa18.24■□□□□ 0.51
VPS11-205ENST00000534551 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
VPS11-205ENST00000534551 USPL1Q5W0Q7 1092 aa18.24■□□□□ 0.51
VPS11-205ENST00000534551 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
VPS11-205ENST00000534551 ANKRD36CQ5JPF3 1778 aa18.24■□□□□ 0.51
VPS11-205ENST00000534551 ARFGEF2Q9Y6D5 1785 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 MYL6BP14649 208 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
VPS11-205ENST00000534551 FKBP8Q14318 412 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 TSPYL6Q8N831 410 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 TBC1D2BQ9UPU7 963 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 KIF13BQ9NQT8 1826 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 IL16Q14005 1332 aa18.23■□□□□ 0.51
VPS11-205ENST00000534551 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
VPS11-205ENST00000534551 ARXQ96QS3 562 aa18.22■□□□□ 0.51
VPS11-205ENST00000534551 PPP1R1BQ9UD71 204 aaPredicted RBP18.22■□□□□ 0.51
VPS11-205ENST00000534551 NRXN2Q9P2S2 1712 aa18.22■□□□□ 0.51
VPS11-205ENST00000534551 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
VPS11-205ENST00000534551 KLHL34Q8N239 644 aa18.21■□□□□ 0.51
VPS11-205ENST00000534551 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
VPS11-205ENST00000534551 N4BP2Q86UW6 1770 aaPredicted RBP18.21■□□□□ 0.51
VPS11-205ENST00000534551 MMP10P09238 476 aa18.2■□□□□ 0.5
VPS11-205ENST00000534551 POLD1P28340 1107 aa18.2■□□□□ 0.5
VPS11-205ENST00000534551 PDIA6Q15084 440 aa18.2■□□□□ 0.5
VPS11-205ENST00000534551 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
VPS11-205ENST00000534551 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
VPS11-205ENST00000534551 DZIP3Q86Y13 1208 aaKnown RBP18.2■□□□□ 0.5
VPS11-205ENST00000534551 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
VPS11-205ENST00000534551 ANKRD31Q8N7Z5 1873 aa18.2■□□□□ 0.5
VPS11-205ENST00000534551 ZPR1O75312 459 aa18.19■□□□□ 0.5
VPS11-205ENST00000534551 CAMTA2O94983 1202 aa18.19■□□□□ 0.5
VPS11-205ENST00000534551 DDR1Q08345 913 aa18.19■□□□□ 0.5
VPS11-205ENST00000534551 TTLL7Q6ZT98 887 aa18.19■□□□□ 0.5
VPS11-205ENST00000534551 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
VPS11-205ENST00000534551 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
VPS11-205ENST00000534551 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
VPS11-205ENST00000534551 BICDL1Q6ZP65 573 aa18.17■□□□□ 0.5
VPS11-205ENST00000534551 COL11A2P13942 1736 aaPredicted RBP18.17■□□□□ 0.5
VPS11-205ENST00000534551 ERBB4Q15303 1308 aa18.17■□□□□ 0.5
VPS11-205ENST00000534551 A0A087WZG4 1122 aa18.16■□□□□ 0.5
VPS11-205ENST00000534551 HOXB7P09629 217 aa18.16■□□□□ 0.5
VPS11-205ENST00000534551 EXOSC9Q06265 439 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms