RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 ZDHHC1Q8WTX9 485 aa6.9□□□□□ -1.3
HIPK3-206ENST00000534262 HINFPQ9BQA5 517 aa6.9□□□□□ -1.3
HIPK3-206ENST00000534262 ATAD2Q6PL18 1390 aa6.9□□□□□ -1.31
HIPK3-206ENST00000534262 WEE1P30291 646 aa6.89□□□□□ -1.31
HIPK3-206ENST00000534262 NOS2P35228 1153 aa6.89□□□□□ -1.31
HIPK3-206ENST00000534262 NFX1Q12986 1120 aaKnown RBP6.89□□□□□ -1.31
HIPK3-206ENST00000534262 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
HIPK3-206ENST00000534262 TBCELQ5QJ74 424 aa6.89□□□□□ -1.31
HIPK3-206ENST00000534262 CABP1Q9NZU7 370 aa6.89□□□□□ -1.31
HIPK3-206ENST00000534262 A0A1B0GTH6 734 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 H3BM21 787 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 LGR5O75473 907 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 F11P03951 625 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 VEGFBP49765 207 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 STAG2Q8N3U4 1231 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 KCTD17Q8N5Z5 321 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 C7orf43Q8WVR3 580 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 SCG3Q8WXD2 468 aaKnown RBP6.88□□□□□ -1.31
HIPK3-206ENST00000534262 NANOS1Q8WY41 292 aaKnown RBP6.88□□□□□ -1.31
HIPK3-206ENST00000534262 L3MBTL2Q969R5 705 aa6.88□□□□□ -1.31
HIPK3-206ENST00000534262 TMEM88BA6NKF7 163 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 EML1O00423 815 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 IGFBP4P22692 258 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 ITGA6P23229 1130 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 MSX1P28360 303 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 PLA2G4AP47712 749 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 PSMA6P60900 246 aaKnown RBP6.87□□□□□ -1.31
HIPK3-206ENST00000534262 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
HIPK3-206ENST00000534262 CUEDC1Q9NWM3 386 aaPredicted RBP6.87□□□□□ -1.31
HIPK3-206ENST00000534262 SLAIN2Q9P270 581 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 PARP3Q9Y6F1 533 aa6.87□□□□□ -1.31
HIPK3-206ENST00000534262 SERTM1A2A2V5 107 aa6.86□□□□□ -1.31
HIPK3-206ENST00000534262 HIRAP54198 1017 aaPredicted RBP6.86□□□□□ -1.31
HIPK3-206ENST00000534262 OCLNQ16625 522 aa6.86□□□□□ -1.31
HIPK3-206ENST00000534262 DBN1Q16643 649 aa6.86□□□□□ -1.31
HIPK3-206ENST00000534262 SH3PXD2AQ5TCZ1 1133 aa6.86□□□□□ -1.31
HIPK3-206ENST00000534262 RGS22Q8NE09 1264 aa6.86□□□□□ -1.31
HIPK3-206ENST00000534262 C1orf216Q8TAB5 229 aa6.86□□□□□ -1.31
HIPK3-206ENST00000534262 CLP1Q92989 425 aaKnown RBP6.86□□□□□ -1.31
HIPK3-206ENST00000534262 GAS2L1Q99501 681 aaPredicted RBP6.86□□□□□ -1.31
HIPK3-206ENST00000534262 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
HIPK3-206ENST00000534262 PPP1R12BO60237 982 aaPredicted RBP6.85□□□□□ -1.31
HIPK3-206ENST00000534262 VSIG8P0DPA2 414 aa6.85□□□□□ -1.31
HIPK3-206ENST00000534262 TXLNAP40222 546 aa6.85□□□□□ -1.31
HIPK3-206ENST00000534262 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
HIPK3-206ENST00000534262 TREML4Q6UXN2 200 aa6.85□□□□□ -1.31
HIPK3-206ENST00000534262 AIDAQ96BJ3 306 aa6.85□□□□□ -1.31
HIPK3-206ENST00000534262 GMCL1Q96IK5 515 aa6.85□□□□□ -1.31
HIPK3-206ENST00000534262 ZDHHC3Q9NYG2 299 aa6.85□□□□□ -1.31
HIPK3-206ENST00000534262 THBS1P07996 1170 aa6.84□□□□□ -1.31
HIPK3-206ENST00000534262 ATP4AP20648 1035 aa6.84□□□□□ -1.31
HIPK3-206ENST00000534262 TRIM22Q8IYM9 498 aa6.84□□□□□ -1.31
HIPK3-206ENST00000534262 SLC16A10Q8TF71 515 aa6.84□□□□□ -1.31
HIPK3-206ENST00000534262 PRIMPOLQ96LW4 560 aa6.84□□□□□ -1.31
HIPK3-206ENST00000534262 CRISPLD1Q9H336 500 aa6.84□□□□□ -1.31
HIPK3-206ENST00000534262 ERBB4Q15303 1308 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 H7C1W4 665 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 WFS1O76024 890 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 CSB-PGBD3P0DP91 1061 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 UBAP2LQ14157 1087 aaKnown RBP6.83□□□□□ -1.32
HIPK3-206ENST00000534262 NBPF1Q3BBV0 1214 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 C1orf53Q5VUE5 145 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 RIPOR1Q6ZS17 1223 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 VWA5B2Q8N398 1253 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 GPR161Q8N6U8 529 aaKnown RBP6.83□□□□□ -1.32
HIPK3-206ENST00000534262 CHMP7Q8WUX9 453 aaPredicted RBP6.83□□□□□ -1.32
HIPK3-206ENST00000534262 GPAMQ9HCL2 828 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 ZNF232Q9UNY5 417 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 HCN4Q9Y3Q4 1203 aa6.83□□□□□ -1.32
HIPK3-206ENST00000534262 CARNS1A5YM72 827 aa6.82□□□□□ -1.32
HIPK3-206ENST00000534262 FOXO3O43524 673 aa6.82□□□□□ -1.32
HIPK3-206ENST00000534262 PRMT3O60678 531 aa6.82□□□□□ -1.32
HIPK3-206ENST00000534262 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
HIPK3-206ENST00000534262 ZNF837Q96EG3 531 aaPredicted RBP6.82□□□□□ -1.32
HIPK3-206ENST00000534262 ZIC5Q96T25 663 aa6.82□□□□□ -1.32
HIPK3-206ENST00000534262 RUBCNLQ9H714 662 aa6.82□□□□□ -1.32
HIPK3-206ENST00000534262 CHMP3Q9Y3E7 222 aa6.82□□□□□ -1.32
HIPK3-206ENST00000534262 TATP17735 454 aaPredicted RBP6.81□□□□□ -1.32
HIPK3-206ENST00000534262 FKBP5Q13451 457 aaPredicted RBP6.81□□□□□ -1.32
HIPK3-206ENST00000534262 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
HIPK3-206ENST00000534262 ALDH16A1Q8IZ83 802 aa6.81□□□□□ -1.32
HIPK3-206ENST00000534262 RETREG2Q8NC44 543 aa6.81□□□□□ -1.32
HIPK3-206ENST00000534262 IRF7Q92985 503 aa6.81□□□□□ -1.32
HIPK3-206ENST00000534262 KLRG1Q96E93 195 aa6.81□□□□□ -1.32
HIPK3-206ENST00000534262 CXXC1Q9P0U4 656 aaPredicted RBP6.81□□□□□ -1.32
HIPK3-206ENST00000534262 A0A1W2PNR3 127 aa6.8□□□□□ -1.32
HIPK3-206ENST00000534262 NLRP8Q86W28 1048 aa6.8□□□□□ -1.32
HIPK3-206ENST00000534262 PGBD3Q8N328 593 aa6.8□□□□□ -1.32
HIPK3-206ENST00000534262 PHACTR1Q9C0D0 580 aa6.8□□□□□ -1.32
HIPK3-206ENST00000534262 NUCKS1Q9H1E3 243 aaKnown RBP6.8□□□□□ -1.32
HIPK3-206ENST00000534262 USTQ9Y2C2 406 aa6.8□□□□□ -1.32
HIPK3-206ENST00000534262 GPC6Q9Y625 555 aaPredicted RBP6.8□□□□□ -1.32
HIPK3-206ENST00000534262 CDC14CA4D256 554 aa6.79□□□□□ -1.32
HIPK3-206ENST00000534262 SSFA2P28290 1259 aa6.79□□□□□ -1.32
HIPK3-206ENST00000534262 ARSJQ5FYB0 599 aaPredicted RBP6.79□□□□□ -1.32
HIPK3-206ENST00000534262 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
HIPK3-206ENST00000534262 COL26A1Q96A83 441 aa6.79□□□□□ -1.32
HIPK3-206ENST00000534262 ATP2B4P23634 1241 aa6.78□□□□□ -1.32
HIPK3-206ENST00000534262 PHLDB3Q6NSJ2 640 aa6.78□□□□□ -1.32
HIPK3-206ENST00000534262 CAPN12Q6ZSI9 719 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms