RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
CAPN1-227ENST00000533909 FHDC1Q9C0D6 1143 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-227ENST00000533909 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
CAPN1-227ENST00000533909 CICQ96RK0 1608 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-227ENST00000533909 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
CAPN1-227ENST00000533909 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
CAPN1-227ENST00000533909 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-227ENST00000533909 ZPR1O75312 459 aa17.54■□□□□ 0.4
CAPN1-227ENST00000533909 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
CAPN1-227ENST00000533909 ZBTB1Q9Y2K1 713 aa17.54■□□□□ 0.4
CAPN1-227ENST00000533909 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
CAPN1-227ENST00000533909 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
CAPN1-227ENST00000533909 SOS1Q07889 1333 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-227ENST00000533909 A0A087WZG4 1122 aa17.52■□□□□ 0.4
CAPN1-227ENST00000533909 CCDC184Q52MB2 194 aa17.52■□□□□ 0.4
CAPN1-227ENST00000533909 SYT17Q9BSW7 474 aa17.52■□□□□ 0.4
CAPN1-227ENST00000533909 COL15A1P39059 1388 aa17.52■□□□□ 0.39
CAPN1-227ENST00000533909 APAF1O14727 1248 aa17.51■□□□□ 0.39
CAPN1-227ENST00000533909 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
CAPN1-227ENST00000533909 MMP10P09238 476 aa17.5■□□□□ 0.39
CAPN1-227ENST00000533909 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
CAPN1-227ENST00000533909 USP42Q9H9J4 1324 aaKnown RBP17.49■□□□□ 0.39
CAPN1-227ENST00000533909 GYS1P13807 737 aa17.49■□□□□ 0.39
CAPN1-227ENST00000533909 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
CAPN1-227ENST00000533909 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
CAPN1-227ENST00000533909 COL24A1Q17RW2 1714 aa17.49■□□□□ 0.39
CAPN1-227ENST00000533909 A1BGP04217 495 aa17.48■□□□□ 0.39
CAPN1-227ENST00000533909 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-227ENST00000533909 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
CAPN1-227ENST00000533909 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
CAPN1-227ENST00000533909 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
CAPN1-227ENST00000533909 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
CAPN1-227ENST00000533909 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
CAPN1-227ENST00000533909 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
CAPN1-227ENST00000533909 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
CAPN1-227ENST00000533909 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
CAPN1-227ENST00000533909 KDM3BQ7LBC6 1761 aa17.46■□□□□ 0.39
CAPN1-227ENST00000533909 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
CAPN1-227ENST00000533909 CD2APQ9Y5K6 639 aa17.46■□□□□ 0.39
CAPN1-227ENST00000533909 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-227ENST00000533909 FKBP8Q14318 412 aa17.45■□□□□ 0.38
CAPN1-227ENST00000533909 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
CAPN1-227ENST00000533909 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
CAPN1-227ENST00000533909 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-227ENST00000533909 TBC1D2BQ9UPU7 963 aa17.44■□□□□ 0.38
CAPN1-227ENST00000533909 GPR162Q16538 588 aa17.43■□□□□ 0.38
CAPN1-227ENST00000533909 CHL1O00533 1208 aa17.42■□□□□ 0.38
CAPN1-227ENST00000533909 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
CAPN1-227ENST00000533909 NLGN2Q8NFZ4 835 aa17.42■□□□□ 0.38
CAPN1-227ENST00000533909 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
CAPN1-227ENST00000533909 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
CAPN1-227ENST00000533909 EIF2S2P20042 333 aaKnown RBP17.41■□□□□ 0.38
CAPN1-227ENST00000533909 GNAI1P63096 354 aa17.41■□□□□ 0.38
CAPN1-227ENST00000533909 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
CAPN1-227ENST00000533909 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
CAPN1-227ENST00000533909 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
CAPN1-227ENST00000533909 NPHP1O15259 732 aa17.4■□□□□ 0.38
CAPN1-227ENST00000533909 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
CAPN1-227ENST00000533909 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
CAPN1-227ENST00000533909 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
CAPN1-227ENST00000533909 MYL6BP14649 208 aa17.39■□□□□ 0.37
CAPN1-227ENST00000533909 NFIXQ14938 502 aa17.39■□□□□ 0.37
CAPN1-227ENST00000533909 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
CAPN1-227ENST00000533909 KIF6Q6ZMV9 814 aa17.39■□□□□ 0.37
CAPN1-227ENST00000533909 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
CAPN1-227ENST00000533909 DDR1Q08345 913 aa17.38■□□□□ 0.37
CAPN1-227ENST00000533909 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-227ENST00000533909 ERBB4Q15303 1308 aa17.38■□□□□ 0.37
CAPN1-227ENST00000533909 POLRMTO00411 1230 aaKnown RBP17.37■□□□□ 0.37
CAPN1-227ENST00000533909 CAMTA2O94983 1202 aa17.37■□□□□ 0.37
CAPN1-227ENST00000533909 TM4SF1P30408 202 aa17.37■□□□□ 0.37
CAPN1-227ENST00000533909 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
CAPN1-227ENST00000533909 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
CAPN1-227ENST00000533909 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
CAPN1-227ENST00000533909 BCL2L12Q9HB09 334 aa17.37■□□□□ 0.37
CAPN1-227ENST00000533909 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
CAPN1-227ENST00000533909 SERPINB2P05120 415 aa17.36■□□□□ 0.37
CAPN1-227ENST00000533909 TBC1D9BQ66K14 1250 aa17.36■□□□□ 0.37
CAPN1-227ENST00000533909 C10orf71Q711Q0 1435 aa17.36■□□□□ 0.37
CAPN1-227ENST00000533909 TGFB2P61812 414 aa17.35■□□□□ 0.37
CAPN1-227ENST00000533909 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
CAPN1-227ENST00000533909 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
CAPN1-227ENST00000533909 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
CAPN1-227ENST00000533909 CARMIL3Q8ND23 1372 aa17.35■□□□□ 0.37
CAPN1-227ENST00000533909 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
CAPN1-227ENST00000533909 HOXB7P09629 217 aa17.34■□□□□ 0.37
CAPN1-227ENST00000533909 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
CAPN1-227ENST00000533909 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
CAPN1-227ENST00000533909 DIEXFQ68CQ4 756 aaKnown RBP17.34■□□□□ 0.37
CAPN1-227ENST00000533909 WWC3Q9ULE0 1092 aa17.34■□□□□ 0.37
CAPN1-227ENST00000533909 GRIN3BO60391 1043 aa17.33■□□□□ 0.36
CAPN1-227ENST00000533909 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
CAPN1-227ENST00000533909 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
CAPN1-227ENST00000533909 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.36
CAPN1-227ENST00000533909 A0A0G2JLW4 131 aa17.32■□□□□ 0.36
CAPN1-227ENST00000533909 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
CAPN1-227ENST00000533909 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-227ENST00000533909 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
CAPN1-227ENST00000533909 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
CAPN1-227ENST00000533909 IL16Q14005 1332 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms