RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 ARHGEF1Q92888 912 aaKnown RBP22.93■■□□□ 1.26
NXF1-217ENST00000533671 KDM3BQ7LBC6 1761 aa22.92■■□□□ 1.26
NXF1-217ENST00000533671 COL24A1Q17RW2 1714 aa22.91■■□□□ 1.26
NXF1-217ENST00000533671 SNRPA1P09661 255 aaKnown RBP22.91■■□□□ 1.26
NXF1-217ENST00000533671 CANXP27824 592 aaKnown RBP22.91■■□□□ 1.26
NXF1-217ENST00000533671 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
NXF1-217ENST00000533671 SGIP1Q9BQI5 828 aa22.91■■□□□ 1.26
NXF1-217ENST00000533671 TSPYL4Q9UJ04 414 aa22.91■■□□□ 1.26
NXF1-217ENST00000533671 NPM2Q86SE8 214 aaKnown RBP22.9■■□□□ 1.26
NXF1-217ENST00000533671 ZBTB1Q9Y2K1 713 aa22.9■■□□□ 1.26
NXF1-217ENST00000533671 LAS1LQ9Y4W2 734 aaKnown RBP22.9■■□□□ 1.26
NXF1-217ENST00000533671 C4AP0C0L4 1744 aa22.9■■□□□ 1.26
NXF1-217ENST00000533671 TRIM35Q9UPQ4 493 aa22.88■■□□□ 1.25
NXF1-217ENST00000533671 ZNF330Q9Y3S2 320 aaPredicted RBP22.88■■□□□ 1.25
NXF1-217ENST00000533671 SOS1Q07889 1333 aaPredicted RBP22.87■■□□□ 1.25
NXF1-217ENST00000533671 ZPR1O75312 459 aa22.87■■□□□ 1.25
NXF1-217ENST00000533671 FAM9BQ8IZU0 186 aa22.87■■□□□ 1.25
NXF1-217ENST00000533671 SRCAPQ6ZRS2 3230 aa22.87■■□□□ 1.25
NXF1-217ENST00000533671 FHDC1Q9C0D6 1143 aaPredicted RBP22.86■■□□□ 1.25
NXF1-217ENST00000533671 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
NXF1-217ENST00000533671 USP16Q9Y5T5 823 aa22.86■■□□□ 1.25
NXF1-217ENST00000533671 COL15A1P39059 1388 aa22.86■■□□□ 1.25
NXF1-217ENST00000533671 PRAMEF22A3QJZ6 481 aa22.85■■□□□ 1.25
NXF1-217ENST00000533671 A1BGP04217 495 aa22.85■■□□□ 1.25
NXF1-217ENST00000533671 NLGN1Q8N2Q7 840 aa22.85■■□□□ 1.25
NXF1-217ENST00000533671 A0A087WZG4 1122 aa22.84■■□□□ 1.25
NXF1-217ENST00000533671 EIF4A1P60842 406 aaKnown RBP22.84■■□□□ 1.25
NXF1-217ENST00000533671 CALD1Q05682 793 aaKnown RBP22.84■■□□□ 1.25
NXF1-217ENST00000533671 SRP68Q9UHB9 627 aaKnown RBP22.84■■□□□ 1.25
NXF1-217ENST00000533671 LAMB4A4D0S4 1761 aa22.84■■□□□ 1.25
NXF1-217ENST00000533671 GYS1P13807 737 aa22.83■■□□□ 1.25
NXF1-217ENST00000533671 USP42Q9H9J4 1324 aaKnown RBP22.82■■□□□ 1.24
NXF1-217ENST00000533671 SENP3-EIF4A1A0A087X0R7 540 aa22.82■■□□□ 1.24
NXF1-217ENST00000533671 DCAF8L1A6NGE4 600 aa22.82■■□□□ 1.24
NXF1-217ENST00000533671 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
NXF1-217ENST00000533671 MMP10P09238 476 aa22.81■■□□□ 1.24
NXF1-217ENST00000533671 IL6STP40189 918 aaPredicted RBP22.81■■□□□ 1.24
NXF1-217ENST00000533671 EIF5P55010 431 aaKnown RBP22.81■■□□□ 1.24
NXF1-217ENST00000533671 USPL1Q5W0Q7 1092 aa22.81■■□□□ 1.24
NXF1-217ENST00000533671 SYT17Q9BSW7 474 aa22.81■■□□□ 1.24
NXF1-217ENST00000533671 NARFQ9UHQ1 456 aa22.8■■□□□ 1.24
NXF1-217ENST00000533671 CHL1O00533 1208 aa22.79■■□□□ 1.24
NXF1-217ENST00000533671 PIP4K2AP48426 406 aaPredicted RBP22.79■■□□□ 1.24
NXF1-217ENST00000533671 PARP3Q9Y6F1 533 aa22.79■■□□□ 1.24
NXF1-217ENST00000533671 DIEXFQ68CQ4 756 aaKnown RBP22.78■■□□□ 1.24
NXF1-217ENST00000533671 CFAP44Q96MT7 982 aa22.78■■□□□ 1.24
NXF1-217ENST00000533671 FKBP8Q14318 412 aa22.77■■□□□ 1.24
NXF1-217ENST00000533671 TBC1D2BQ9UPU7 963 aa22.77■■□□□ 1.24
NXF1-217ENST00000533671 SALL2Q9Y467 1007 aaPredicted RBP22.77■■□□□ 1.24
NXF1-217ENST00000533671 EIF2S2P20042 333 aaKnown RBP22.76■■□□□ 1.23
NXF1-217ENST00000533671 GNAI1P63096 354 aa22.76■■□□□ 1.23
NXF1-217ENST00000533671 DZIP3Q86Y13 1208 aaKnown RBP22.75■■□□□ 1.23
NXF1-217ENST00000533671 IFT57Q9NWB7 429 aa22.75■■□□□ 1.23
NXF1-217ENST00000533671 NGEFQ8N5V2 710 aa22.74■■□□□ 1.23
NXF1-217ENST00000533671 CCDC27Q2M243 656 aa22.73■■□□□ 1.23
NXF1-217ENST00000533671 MBIPQ9NS73 344 aa22.73■■□□□ 1.23
NXF1-217ENST00000533671 CD2APQ9Y5K6 639 aa22.73■■□□□ 1.23
NXF1-217ENST00000533671 NBPF26B4DH59 902 aa22.72■■□□□ 1.23
NXF1-217ENST00000533671 CCER2I3L3R5 266 aa22.72■■□□□ 1.23
NXF1-217ENST00000533671 MYL6BP14649 208 aa22.72■■□□□ 1.23
NXF1-217ENST00000533671 NBPF10Q6P3W6 841 aaKnown RBP22.72■■□□□ 1.23
NXF1-217ENST00000533671 WWC1Q8IX03 1113 aa22.72■■□□□ 1.23
NXF1-217ENST00000533671 NBPF15Q8N660 670 aa22.72■■□□□ 1.23
NXF1-217ENST00000533671 SCN7AQ01118 1682 aa22.71■■□□□ 1.23
NXF1-217ENST00000533671 BICDL1Q6ZP65 573 aa22.71■■□□□ 1.23
NXF1-217ENST00000533671 NECTIN2Q92692 538 aa22.71■■□□□ 1.23
NXF1-217ENST00000533671 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
NXF1-217ENST00000533671 KRT24Q2M2I5 525 aa22.7■■□□□ 1.22
NXF1-217ENST00000533671 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.22
NXF1-217ENST00000533671 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
NXF1-217ENST00000533671 NLGN2Q8NFZ4 835 aa22.7■■□□□ 1.22
NXF1-217ENST00000533671 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
NXF1-217ENST00000533671 BCORQ6W2J9 1755 aa22.7■■□□□ 1.22
NXF1-217ENST00000533671 TM4SF1P30408 202 aa22.69■■□□□ 1.22
NXF1-217ENST00000533671 NFIXQ14938 502 aa22.69■■□□□ 1.22
NXF1-217ENST00000533671 BCL2L12Q9HB09 334 aa22.69■■□□□ 1.22
NXF1-217ENST00000533671 ZNF652Q9Y2D9 606 aa22.69■■□□□ 1.22
NXF1-217ENST00000533671 CAMTA2O94983 1202 aa22.68■■□□□ 1.22
NXF1-217ENST00000533671 DDR1Q08345 913 aa22.68■■□□□ 1.22
NXF1-217ENST00000533671 KIF6Q6ZMV9 814 aa22.68■■□□□ 1.22
NXF1-217ENST00000533671 AFDNP55196 1824 aaKnown RBP22.67■■□□□ 1.22
NXF1-217ENST00000533671 POLRMTO00411 1230 aaKnown RBP22.67■■□□□ 1.22
NXF1-217ENST00000533671 GPR162Q16538 588 aa22.67■■□□□ 1.22
NXF1-217ENST00000533671 DUSP27Q5VZP5 1158 aa22.67■■□□□ 1.22
NXF1-217ENST00000533671 NPHP1O15259 732 aa22.66■■□□□ 1.22
NXF1-217ENST00000533671 HOXB7P09629 217 aa22.66■■□□□ 1.22
NXF1-217ENST00000533671 HDGFL1Q5TGJ6 251 aa22.66■■□□□ 1.22
NXF1-217ENST00000533671 TBC1D9BQ66K14 1250 aa22.66■■□□□ 1.22
NXF1-217ENST00000533671 SETDB2Q96T68 719 aa22.66■■□□□ 1.22
NXF1-217ENST00000533671 KIF13BQ9NQT8 1826 aa22.66■■□□□ 1.22
NXF1-217ENST00000533671 SERPINB2P05120 415 aa22.65■■□□□ 1.22
NXF1-217ENST00000533671 IL16Q14005 1332 aa22.64■■□□□ 1.22
NXF1-217ENST00000533671 ELL2O00472 640 aaPredicted RBP22.64■■□□□ 1.21
NXF1-217ENST00000533671 CLEC4GQ6UXB4 293 aa22.64■■□□□ 1.21
NXF1-217ENST00000533671 WDR63Q8IWG1 891 aa22.64■■□□□ 1.21
NXF1-217ENST00000533671 ANXA1P04083 346 aa22.63■■□□□ 1.21
NXF1-217ENST00000533671 MIER1Q8N108 512 aa22.63■■□□□ 1.21
NXF1-217ENST00000533671 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
NXF1-217ENST00000533671 NUP98P52948 1817 aa22.63■■□□□ 1.21
NXF1-217ENST00000533671 C10orf71Q711Q0 1435 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms