RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 INTS5Q6P9B9 1019 aaKnown RBP22.37■■□□□ 1.17
FGFR1-239ENST00000533619 LRP5O75197 1615 aa22.36■■□□□ 1.17
FGFR1-239ENST00000533619 ATF5Q9Y2D1 282 aaPredicted RBP22.36■■□□□ 1.17
FGFR1-239ENST00000533619 EIF4A1P60842 406 aaKnown RBP22.35■■□□□ 1.17
FGFR1-239ENST00000533619 NGEFQ8N5V2 710 aa22.35■■□□□ 1.17
FGFR1-239ENST00000533619 CHL1O00533 1208 aa22.34■■□□□ 1.17
FGFR1-239ENST00000533619 CFAP44Q96MT7 982 aa22.34■■□□□ 1.17
FGFR1-239ENST00000533619 RFC4P35249 363 aa22.33■■□□□ 1.17
FGFR1-239ENST00000533619 AMIGO3Q86WK7 504 aa22.33■■□□□ 1.17
FGFR1-239ENST00000533619 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.17
FGFR1-239ENST00000533619 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.17
FGFR1-239ENST00000533619 GNAI1P63096 354 aa22.32■■□□□ 1.16
FGFR1-239ENST00000533619 USP16Q9Y5T5 823 aa22.32■■□□□ 1.16
FGFR1-239ENST00000533619 GIGYF1O75420 1035 aaPredicted RBP22.31■■□□□ 1.16
FGFR1-239ENST00000533619 CANXP27824 592 aaKnown RBP22.31■■□□□ 1.16
FGFR1-239ENST00000533619 POLD1P28340 1107 aa22.31■■□□□ 1.16
FGFR1-239ENST00000533619 SMIM5Q71RC9 77 aa22.31■■□□□ 1.16
FGFR1-239ENST00000533619 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
FGFR1-239ENST00000533619 IFT57Q9NWB7 429 aa22.31■■□□□ 1.16
FGFR1-239ENST00000533619 ZBTB1Q9Y2K1 713 aa22.31■■□□□ 1.16
FGFR1-239ENST00000533619 WWC1Q8IX03 1113 aa22.3■■□□□ 1.16
FGFR1-239ENST00000533619 MIER1Q8N108 512 aa22.3■■□□□ 1.16
FGFR1-239ENST00000533619 PPP1R1BQ9UD71 204 aaPredicted RBP22.3■■□□□ 1.16
FGFR1-239ENST00000533619 SOS1Q07889 1333 aaPredicted RBP22.3■■□□□ 1.16
FGFR1-239ENST00000533619 A0A087WZG4 1122 aa22.29■■□□□ 1.16
FGFR1-239ENST00000533619 IL6STP40189 918 aaPredicted RBP22.29■■□□□ 1.16
FGFR1-239ENST00000533619 PTGER2P43116 358 aa22.29■■□□□ 1.16
FGFR1-239ENST00000533619 PRAMEF22A3QJZ6 481 aa22.28■■□□□ 1.16
FGFR1-239ENST00000533619 A1BGP04217 495 aa22.28■■□□□ 1.16
FGFR1-239ENST00000533619 ZNF853P0CG23 659 aa22.28■■□□□ 1.16
FGFR1-239ENST00000533619 SGIP1Q9BQI5 828 aa22.28■■□□□ 1.16
FGFR1-239ENST00000533619 COL24A1Q17RW2 1714 aa22.28■■□□□ 1.16
FGFR1-239ENST00000533619 EIF5P55010 431 aaKnown RBP22.27■■□□□ 1.16
FGFR1-239ENST00000533619 NLGN1Q8N2Q7 840 aa22.27■■□□□ 1.16
FGFR1-239ENST00000533619 ZPR1O75312 459 aa22.26■■□□□ 1.15
FGFR1-239ENST00000533619 WDR63Q8IWG1 891 aa22.26■■□□□ 1.15
FGFR1-239ENST00000533619 IL16Q14005 1332 aa22.26■■□□□ 1.15
FGFR1-239ENST00000533619 COL15A1P39059 1388 aa22.25■■□□□ 1.15
FGFR1-239ENST00000533619 LAMB4A4D0S4 1761 aa22.25■■□□□ 1.15
FGFR1-239ENST00000533619 ARXQ96QS3 562 aa22.25■■□□□ 1.15
FGFR1-239ENST00000533619 MBIPQ9NS73 344 aa22.25■■□□□ 1.15
FGFR1-239ENST00000533619 NARFQ9UHQ1 456 aa22.25■■□□□ 1.15
FGFR1-239ENST00000533619 SALL2Q9Y467 1007 aaPredicted RBP22.25■■□□□ 1.15
FGFR1-239ENST00000533619 C4AP0C0L4 1744 aa22.24■■□□□ 1.15
FGFR1-239ENST00000533619 SENP3-EIF4A1A0A087X0R7 540 aa22.24■■□□□ 1.15
FGFR1-239ENST00000533619 MSL1Q68DK7 614 aa22.24■■□□□ 1.15
FGFR1-239ENST00000533619 GYS1P13807 737 aa22.23■■□□□ 1.15
FGFR1-239ENST00000533619 ERBB4Q15303 1308 aa22.23■■□□□ 1.15
FGFR1-239ENST00000533619 USP42Q9H9J4 1324 aaKnown RBP22.23■■□□□ 1.15
FGFR1-239ENST00000533619 HOXB7P09629 217 aa22.22■■□□□ 1.15
FGFR1-239ENST00000533619 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
FGFR1-239ENST00000533619 CHMP4AQ9BY43 222 aa22.21■■□□□ 1.15
FGFR1-239ENST00000533619 EIF2S2P20042 333 aaKnown RBP22.2■■□□□ 1.14
FGFR1-239ENST00000533619 USPL1Q5W0Q7 1092 aa22.2■■□□□ 1.14
FGFR1-239ENST00000533619 SRP68Q9UHB9 627 aaKnown RBP22.2■■□□□ 1.14
FGFR1-239ENST00000533619 NBPF26B4DH59 902 aa22.19■■□□□ 1.14
FGFR1-239ENST00000533619 NBPF10Q6P3W6 841 aaKnown RBP22.19■■□□□ 1.14
FGFR1-239ENST00000533619 NBPF15Q8N660 670 aa22.19■■□□□ 1.14
FGFR1-239ENST00000533619 PIP4K2AP48426 406 aaPredicted RBP22.18■■□□□ 1.14
FGFR1-239ENST00000533619 TBC1D2BQ9UPU7 963 aa22.18■■□□□ 1.14
FGFR1-239ENST00000533619 DUSP27Q5VZP5 1158 aa22.17■■□□□ 1.14
FGFR1-239ENST00000533619 DZIP3Q86Y13 1208 aaKnown RBP22.17■■□□□ 1.14
FGFR1-239ENST00000533619 MMP10P09238 476 aa22.16■■□□□ 1.14
FGFR1-239ENST00000533619 FKBP8Q14318 412 aa22.16■■□□□ 1.14
FGFR1-239ENST00000533619 KRT24Q2M2I5 525 aa22.16■■□□□ 1.14
FGFR1-239ENST00000533619 PARP3Q9Y6F1 533 aa22.16■■□□□ 1.14
FGFR1-239ENST00000533619 SRCAPQ6ZRS2 3230 aa22.16■■□□□ 1.14
FGFR1-239ENST00000533619 RGL2O15211 777 aa22.15■■□□□ 1.14
FGFR1-239ENST00000533619 MYL6BP14649 208 aa22.14■■□□□ 1.13
FGFR1-239ENST00000533619 HDGFL1Q5TGJ6 251 aa22.14■■□□□ 1.13
FGFR1-239ENST00000533619 TSR2Q969E8 191 aaKnown RBP22.14■■□□□ 1.13
FGFR1-239ENST00000533619 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
FGFR1-239ENST00000533619 MYH16Q9H6N6 1097 aa22.14■■□□□ 1.13
FGFR1-239ENST00000533619 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
FGFR1-239ENST00000533619 TM4SF1P30408 202 aa22.13■■□□□ 1.13
FGFR1-239ENST00000533619 GOLGA2Q08379 1002 aa22.13■■□□□ 1.13
FGFR1-239ENST00000533619 CLEC4GQ6UXB4 293 aa22.13■■□□□ 1.13
FGFR1-239ENST00000533619 SYT17Q9BSW7 474 aa22.13■■□□□ 1.13
FGFR1-239ENST00000533619 BCL2L12Q9HB09 334 aa22.13■■□□□ 1.13
FGFR1-239ENST00000533619 DDX21Q9NR30 783 aaKnown RBP eCLIP22.13■■□□□ 1.13
FGFR1-239ENST00000533619 CAMTA2O94983 1202 aa22.12■■□□□ 1.13
FGFR1-239ENST00000533619 C8orf58Q8NAV2 365 aa22.12■■□□□ 1.13
FGFR1-239ENST00000533619 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
FGFR1-239ENST00000533619 CD2APQ9Y5K6 639 aa22.12■■□□□ 1.13
FGFR1-239ENST00000533619 ZNF521Q96K83 1311 aa22.11■■□□□ 1.13
FGFR1-239ENST00000533619 ELL2O00472 640 aaPredicted RBP22.11■■□□□ 1.13
FGFR1-239ENST00000533619 PDIA6Q15084 440 aa22.11■■□□□ 1.13
FGFR1-239ENST00000533619 KIF6Q6ZMV9 814 aa22.11■■□□□ 1.13
FGFR1-239ENST00000533619 KLHL34Q8N239 644 aa22.11■■□□□ 1.13
FGFR1-239ENST00000533619 NECTIN2Q92692 538 aa22.11■■□□□ 1.13
FGFR1-239ENST00000533619 ERVV-1B6SEH8 477 aa22.1■■□□□ 1.13
FGFR1-239ENST00000533619 FANCIQ9NVI1 1328 aa22.09■■□□□ 1.13
FGFR1-239ENST00000533619 NFIXQ14938 502 aa22.09■■□□□ 1.13
FGFR1-239ENST00000533619 CCDC30Q5VVM6 783 aa22.09■■□□□ 1.13
FGFR1-239ENST00000533619 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
FGFR1-239ENST00000533619 BCORQ6W2J9 1755 aa22.08■■□□□ 1.13
FGFR1-239ENST00000533619 TWISTNBQ3B726 338 aaPredicted RBP22.08■■□□□ 1.13
FGFR1-239ENST00000533619 SETDB2Q96T68 719 aa22.08■■□□□ 1.13
FGFR1-239ENST00000533619 HYPKQ9NX55 129 aa22.08■■□□□ 1.13
FGFR1-239ENST00000533619 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms