RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 FLAD1Q8NFF5 587 aa18.96■□□□□ 0.63
SF3B2-214ENST00000533595 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
SF3B2-214ENST00000533595 USP16Q9Y5T5 823 aa18.96■□□□□ 0.63
SF3B2-214ENST00000533595 QSER1Q2KHR3 1735 aa18.96■□□□□ 0.63
SF3B2-214ENST00000533595 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
SF3B2-214ENST00000533595 UBR3Q6ZT12 1888 aa18.95■□□□□ 0.62
SF3B2-214ENST00000533595 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
SF3B2-214ENST00000533595 SSFA2P28290 1259 aa18.95■□□□□ 0.62
SF3B2-214ENST00000533595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.94■□□□□ 0.62
SF3B2-214ENST00000533595 PHF14O94880 888 aa18.94■□□□□ 0.62
SF3B2-214ENST00000533595 AMIGO3Q86WK7 504 aa18.94■□□□□ 0.62
SF3B2-214ENST00000533595 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
SF3B2-214ENST00000533595 COL23A1Q86Y22 540 aaPredicted RBP18.93■□□□□ 0.62
SF3B2-214ENST00000533595 PDGFDQ9GZP0 370 aaPredicted RBP18.93■□□□□ 0.62
SF3B2-214ENST00000533595 ZBTB1Q9Y2K1 713 aa18.93■□□□□ 0.62
SF3B2-214ENST00000533595 MSH5O43196 834 aa18.92■□□□□ 0.62
SF3B2-214ENST00000533595 A1BGP04217 495 aa18.92■□□□□ 0.62
SF3B2-214ENST00000533595 ADRA2BP18089 450 aa18.92■□□□□ 0.62
SF3B2-214ENST00000533595 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
SF3B2-214ENST00000533595 KRT24Q2M2I5 525 aa18.92■□□□□ 0.62
SF3B2-214ENST00000533595 SMIM5Q71RC9 77 aa18.92■□□□□ 0.62
SF3B2-214ENST00000533595 TSR2Q969E8 191 aaKnown RBP18.92■□□□□ 0.62
SF3B2-214ENST00000533595 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
SF3B2-214ENST00000533595 CASZ1Q86V15 1759 aa18.91■□□□□ 0.62
SF3B2-214ENST00000533595 TRAPPC3LQ5T215 181 aa18.91■□□□□ 0.62
SF3B2-214ENST00000533595 HOXB7P09629 217 aa18.9■□□□□ 0.62
SF3B2-214ENST00000533595 HNRNPUQ00839 825 aaKnown RBP eCLIP18.9■□□□□ 0.62
SF3B2-214ENST00000533595 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
SF3B2-214ENST00000533595 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
SF3B2-214ENST00000533595 SOS1Q07889 1333 aaPredicted RBP18.9■□□□□ 0.62
SF3B2-214ENST00000533595 DUSP27Q5VZP5 1158 aa18.89■□□□□ 0.61
SF3B2-214ENST00000533595 SLC16A10Q8TF71 515 aa18.89■□□□□ 0.61
SF3B2-214ENST00000533595 ARHGEF1Q92888 912 aaKnown RBP18.89■□□□□ 0.61
SF3B2-214ENST00000533595 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
SF3B2-214ENST00000533595 FANCIQ9NVI1 1328 aa18.89■□□□□ 0.61
SF3B2-214ENST00000533595 EIF2S2P20042 333 aaKnown RBP18.88■□□□□ 0.61
SF3B2-214ENST00000533595 RFC4P35249 363 aa18.88■□□□□ 0.61
SF3B2-214ENST00000533595 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
SF3B2-214ENST00000533595 EIF5P55010 431 aaKnown RBP18.88■□□□□ 0.61
SF3B2-214ENST00000533595 C8orf58Q8NAV2 365 aa18.88■□□□□ 0.61
SF3B2-214ENST00000533595 ELL2O00472 640 aaPredicted RBP18.87■□□□□ 0.61
SF3B2-214ENST00000533595 ZBTB7AO95365 584 aa18.87■□□□□ 0.61
SF3B2-214ENST00000533595 COL15A1P39059 1388 aa18.87■□□□□ 0.61
SF3B2-214ENST00000533595 PIP4K2AP48426 406 aaPredicted RBP18.87■□□□□ 0.61
SF3B2-214ENST00000533595 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
SF3B2-214ENST00000533595 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
SF3B2-214ENST00000533595 ERBB4Q15303 1308 aa18.86■□□□□ 0.61
SF3B2-214ENST00000533595 A0A087WZG4 1122 aa18.86■□□□□ 0.61
SF3B2-214ENST00000533595 NBPF26B4DH59 902 aa18.86■□□□□ 0.61
SF3B2-214ENST00000533595 E9PSI1 815 aa18.86■□□□□ 0.61
SF3B2-214ENST00000533595 NBPF10Q6P3W6 841 aaKnown RBP18.86■□□□□ 0.61
SF3B2-214ENST00000533595 NBPF15Q8N660 670 aa18.86■□□□□ 0.61
SF3B2-214ENST00000533595 MTFR1LQ9H019 292 aa18.86■□□□□ 0.61
SF3B2-214ENST00000533595 HDGFL1Q5TGJ6 251 aa18.85■□□□□ 0.61
SF3B2-214ENST00000533595 NECTIN2Q92692 538 aa18.85■□□□□ 0.61
SF3B2-214ENST00000533595 SPON1Q9HCB6 807 aa18.85■□□□□ 0.61
SF3B2-214ENST00000533595 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
SF3B2-214ENST00000533595 C4AP0C0L4 1744 aa18.84■□□□□ 0.61
SF3B2-214ENST00000533595 SLFN5Q08AF3 891 aa18.84■□□□□ 0.61
SF3B2-214ENST00000533595 TSPYL6Q8N831 410 aa18.84■□□□□ 0.61
SF3B2-214ENST00000533595 USP42Q9H9J4 1324 aaKnown RBP18.83■□□□□ 0.61
SF3B2-214ENST00000533595 ZPR1O75312 459 aa18.83■□□□□ 0.6
SF3B2-214ENST00000533595 MYL6BP14649 208 aa18.83■□□□□ 0.6
SF3B2-214ENST00000533595 EXOSC9Q06265 439 aaKnown RBP18.83■□□□□ 0.6
SF3B2-214ENST00000533595 CDCA7LQ96GN5 454 aa18.83■□□□□ 0.6
SF3B2-214ENST00000533595 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.6
SF3B2-214ENST00000533595 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
SF3B2-214ENST00000533595 PDIA6Q15084 440 aa18.82■□□□□ 0.6
SF3B2-214ENST00000533595 TWISTNBQ3B726 338 aaPredicted RBP18.82■□□□□ 0.6
SF3B2-214ENST00000533595 MSL1Q68DK7 614 aa18.82■□□□□ 0.6
SF3B2-214ENST00000533595 ARXQ96QS3 562 aa18.82■□□□□ 0.6
SF3B2-214ENST00000533595 SRP68Q9UHB9 627 aaKnown RBP18.82■□□□□ 0.6
SF3B2-214ENST00000533595 GYS1P13807 737 aa18.81■□□□□ 0.6
SF3B2-214ENST00000533595 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
SF3B2-214ENST00000533595 DBF4Q9UBU7 674 aaPredicted RBP18.81■□□□□ 0.6
SF3B2-214ENST00000533595 TBC1D2BQ9UPU7 963 aa18.81■□□□□ 0.6
SF3B2-214ENST00000533595 PROSER3Q2NL68 480 aa18.8■□□□□ 0.6
SF3B2-214ENST00000533595 USPL1Q5W0Q7 1092 aa18.8■□□□□ 0.6
SF3B2-214ENST00000533595 DZIP3Q86Y13 1208 aaKnown RBP18.8■□□□□ 0.6
SF3B2-214ENST00000533595 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
SF3B2-214ENST00000533595 CHPF2Q9P2E5 772 aa18.8■□□□□ 0.6
SF3B2-214ENST00000533595 ZBED9Q6R2W3 1325 aa18.79■□□□□ 0.6
SF3B2-214ENST00000533595 ANXA1P04083 346 aa18.79■□□□□ 0.6
SF3B2-214ENST00000533595 POLD1P28340 1107 aa18.79■□□□□ 0.6
SF3B2-214ENST00000533595 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
SF3B2-214ENST00000533595 TRMT2AQ8IZ69 625 aaKnown RBP18.79■□□□□ 0.6
SF3B2-214ENST00000533595 VAMP4O75379 141 aa18.78■□□□□ 0.6
SF3B2-214ENST00000533595 PTGER2P43116 358 aa18.78■□□□□ 0.6
SF3B2-214ENST00000533595 LRP10Q7Z4F1 713 aa18.78■□□□□ 0.6
SF3B2-214ENST00000533595 CAMTA2O94983 1202 aa18.77■□□□□ 0.6
SF3B2-214ENST00000533595 FKBP8Q14318 412 aa18.77■□□□□ 0.6
SF3B2-214ENST00000533595 SGIP1Q9BQI5 828 aa18.77■□□□□ 0.6
SF3B2-214ENST00000533595 HYPKQ9NX55 129 aa18.77■□□□□ 0.6
SF3B2-214ENST00000533595 LRP5O75197 1615 aa18.77■□□□□ 0.6
SF3B2-214ENST00000533595 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.59
SF3B2-214ENST00000533595 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
SF3B2-214ENST00000533595 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
SF3B2-214ENST00000533595 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
SF3B2-214ENST00000533595 BCL2L12Q9HB09 334 aa18.76■□□□□ 0.59
SF3B2-214ENST00000533595 COPS6Q7L5N1 327 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms