RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
NUP98-220ENST00000533346 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
NUP98-220ENST00000533346 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
NUP98-220ENST00000533346 WDR43Q15061 677 aaKnown RBP eCLIP12.99□□□□□ -0.33
NUP98-220ENST00000533346 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
NUP98-220ENST00000533346 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
NUP98-220ENST00000533346 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
NUP98-220ENST00000533346 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
NUP98-220ENST00000533346 KCNQ3O43525 872 aa12.98□□□□□ -0.33
NUP98-220ENST00000533346 RFC4P35249 363 aa12.98□□□□□ -0.33
NUP98-220ENST00000533346 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
NUP98-220ENST00000533346 RIPK4P57078 832 aa12.98□□□□□ -0.33
NUP98-220ENST00000533346 RGL2O15211 777 aa12.97□□□□□ -0.33
NUP98-220ENST00000533346 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
NUP98-220ENST00000533346 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
NUP98-220ENST00000533346 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
NUP98-220ENST00000533346 ZBTB1Q9Y2K1 713 aa12.97□□□□□ -0.33
NUP98-220ENST00000533346 COL15A1P39059 1388 aa12.96□□□□□ -0.33
NUP98-220ENST00000533346 A0A087WZG4 1122 aa12.96□□□□□ -0.33
NUP98-220ENST00000533346 ANP32CO43423 234 aa12.96□□□□□ -0.33
NUP98-220ENST00000533346 TM4SF1P30408 202 aa12.96□□□□□ -0.33
NUP98-220ENST00000533346 NRXN2Q9P2S2 1712 aa12.96□□□□□ -0.34
NUP98-220ENST00000533346 EIF4A1P60842 406 aaKnown RBP12.95□□□□□ -0.34
NUP98-220ENST00000533346 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
NUP98-220ENST00000533346 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
NUP98-220ENST00000533346 USP16Q9Y5T5 823 aa12.95□□□□□ -0.34
NUP98-220ENST00000533346 KIAA1551Q9HCM1 1747 aa12.95□□□□□ -0.34
NUP98-220ENST00000533346 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
NUP98-220ENST00000533346 SCN7AQ01118 1682 aa12.94□□□□□ -0.34
NUP98-220ENST00000533346 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
NUP98-220ENST00000533346 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
NUP98-220ENST00000533346 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
NUP98-220ENST00000533346 CHL1O00533 1208 aa12.93□□□□□ -0.34
NUP98-220ENST00000533346 ZPR1O75312 459 aa12.93□□□□□ -0.34
NUP98-220ENST00000533346 MMP10P09238 476 aa12.93□□□□□ -0.34
NUP98-220ENST00000533346 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
NUP98-220ENST00000533346 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
NUP98-220ENST00000533346 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
NUP98-220ENST00000533346 BRCA1P38398 1863 aaKnown RBP12.92□□□□□ -0.34
NUP98-220ENST00000533346 TGFB2P61812 414 aa12.92□□□□□ -0.34
NUP98-220ENST00000533346 FKBP8Q14318 412 aa12.92□□□□□ -0.34
NUP98-220ENST00000533346 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
NUP98-220ENST00000533346 C10orf71Q711Q0 1435 aa12.92□□□□□ -0.34
NUP98-220ENST00000533346 CCDC146Q8IYE0 955 aa12.92□□□□□ -0.34
NUP98-220ENST00000533346 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
NUP98-220ENST00000533346 ERBB4Q15303 1308 aa12.91□□□□□ -0.34
NUP98-220ENST00000533346 A1BGP04217 495 aa12.91□□□□□ -0.34
NUP98-220ENST00000533346 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
NUP98-220ENST00000533346 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
NUP98-220ENST00000533346 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
NUP98-220ENST00000533346 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
NUP98-220ENST00000533346 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
NUP98-220ENST00000533346 GOLGB1Q14789 3259 aaKnown RBP12.91□□□□□ -0.34
NUP98-220ENST00000533346 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 NBPF26B4DH59 902 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
NUP98-220ENST00000533346 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 C1QTNF8P60827 252 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 NBPF10Q6P3W6 841 aaKnown RBP12.9□□□□□ -0.34
NUP98-220ENST00000533346 NBPF15Q8N660 670 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
NUP98-220ENST00000533346 CEP350Q5VT06 3117 aa12.89□□□□□ -0.35
NUP98-220ENST00000533346 APAF1O14727 1248 aa12.89□□□□□ -0.35
NUP98-220ENST00000533346 DDR1Q08345 913 aa12.89□□□□□ -0.35
NUP98-220ENST00000533346 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
NUP98-220ENST00000533346 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
NUP98-220ENST00000533346 HOXB7P09629 217 aa12.88□□□□□ -0.35
NUP98-220ENST00000533346 CALD1Q05682 793 aaKnown RBP12.88□□□□□ -0.35
NUP98-220ENST00000533346 NFIXQ14938 502 aa12.88□□□□□ -0.35
NUP98-220ENST00000533346 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
NUP98-220ENST00000533346 DLEC1Q9Y238 1755 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 PXDNLA1KZ92 1463 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 NPM2Q86SE8 214 aaKnown RBP12.87□□□□□ -0.35
NUP98-220ENST00000533346 MRS2Q9HD23 443 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 IFT57Q9NWB7 429 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 NUP98P52948 1817 aa12.87□□□□□ -0.35
NUP98-220ENST00000533346 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
NUP98-220ENST00000533346 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
NUP98-220ENST00000533346 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
NUP98-220ENST00000533346 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
NUP98-220ENST00000533346 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
NUP98-220ENST00000533346 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
NUP98-220ENST00000533346 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
NUP98-220ENST00000533346 SERPINB2P05120 415 aa12.85□□□□□ -0.35
NUP98-220ENST00000533346 KCNA3P22001 575 aa12.85□□□□□ -0.35
NUP98-220ENST00000533346 GNAI1P63096 354 aa12.85□□□□□ -0.35
NUP98-220ENST00000533346 PDIA6Q15084 440 aa12.85□□□□□ -0.35
NUP98-220ENST00000533346 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
NUP98-220ENST00000533346 TBC1D9BQ66K14 1250 aa12.84□□□□□ -0.35
NUP98-220ENST00000533346 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
NUP98-220ENST00000533346 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
NUP98-220ENST00000533346 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
NUP98-220ENST00000533346 IL16Q14005 1332 aa12.84□□□□□ -0.35
NUP98-220ENST00000533346 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
NUP98-220ENST00000533346 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.365e-10■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms