RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-223ENST00000533299 ATP9BO43861 1147 aa6.43□□□□□ -1.38
LMO7-223ENST00000533299 GIGYF1O75420 1035 aaPredicted RBP6.43□□□□□ -1.38
LMO7-223ENST00000533299 H2AFB1P0C5Y9 115 aa6.43□□□□□ -1.38
LMO7-223ENST00000533299 H2AFB2P0C5Z0 115 aa6.43□□□□□ -1.38
LMO7-223ENST00000533299 EPXP11678 715 aa6.43□□□□□ -1.38
LMO7-223ENST00000533299 SKIP12755 728 aa6.43□□□□□ -1.38
LMO7-223ENST00000533299 WDR44Q5JSH3 913 aa6.43□□□□□ -1.38
LMO7-223ENST00000533299 SIRT1Q96EB6 747 aa6.43□□□□□ -1.38
LMO7-223ENST00000533299 PALM3A6NDB9 673 aaPredicted RBP6.42□□□□□ -1.38
LMO7-223ENST00000533299 ESPNB1AK53 854 aa6.42□□□□□ -1.38
LMO7-223ENST00000533299 TFIP11Q9UBB9 837 aaKnown RBP6.42□□□□□ -1.38
LMO7-223ENST00000533299 PLPP7Q8NBV4 271 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 GGA1Q9UJY5 639 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 DOLKQ9UPQ8 538 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 F11P03951 625 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 LMOD1P29536 600 aaPredicted RBP6.41□□□□□ -1.38
LMO7-223ENST00000533299 EML3Q32P44 896 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 PHTF2Q8N3S3 785 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 UCN2Q96RP3 112 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
LMO7-223ENST00000533299 ACIN1Q9UKV3 1341 aaKnown RBP6.4□□□□□ -1.38
LMO7-223ENST00000533299 LILRA1O75019 489 aa6.4□□□□□ -1.38
LMO7-223ENST00000533299 PPP1R15AO75807 674 aaPredicted RBP6.4□□□□□ -1.38
LMO7-223ENST00000533299 RAB15P59190 212 aa6.4□□□□□ -1.38
LMO7-223ENST00000533299 USP4Q13107 963 aa6.4□□□□□ -1.38
LMO7-223ENST00000533299 TBC1D9Q6ZT07 1266 aa6.4□□□□□ -1.38
LMO7-223ENST00000533299 USP17L5A8MUK1 530 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 APBA3O96018 575 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 MYCP01106 439 aaPredicted RBP6.39□□□□□ -1.39
LMO7-223ENST00000533299 PLEKHM2Q8IWE5 1019 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 ZNF784Q8NCA9 323 aaPredicted RBP6.39□□□□□ -1.39
LMO7-223ENST00000533299 PCDHB11Q9Y5F2 797 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 MAFBQ9Y5Q3 323 aaPredicted RBP6.39□□□□□ -1.39
LMO7-223ENST00000533299 PIK3CDO00329 1044 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 ELNP15502 786 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 RFX1P22670 979 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 ADD1P35611 737 aaKnown RBP6.39□□□□□ -1.39
LMO7-223ENST00000533299 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 CHIC2Q9UKJ5 165 aa6.39□□□□□ -1.39
LMO7-223ENST00000533299 USP17L3A6NCW0 530 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 USP17L4A6NCW7 530 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 SPDYE3A6NKU9 549 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 BMP4P12644 408 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 LBRQ14739 615 aaKnown RBP6.38□□□□□ -1.39
LMO7-223ENST00000533299 USP17L2Q6R6M4 530 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 USP17L1Q7RTZ2 530 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 TRIM50Q86XT4 487 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 VRTNQ9H8Y1 702 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 NOD1Q9Y239 953 aa6.38□□□□□ -1.39
LMO7-223ENST00000533299 ATP5J2-PTCD1G3V325 749 aa6.37□□□□□ -1.39
LMO7-223ENST00000533299 ERVH48-1M5A8F1 160 aa6.37□□□□□ -1.39
LMO7-223ENST00000533299 ARAFP10398 606 aa6.37□□□□□ -1.39
LMO7-223ENST00000533299 OXLD1Q5BKU9 147 aa6.37□□□□□ -1.39
LMO7-223ENST00000533299 PBXIP1Q96AQ6 731 aa6.37□□□□□ -1.39
LMO7-223ENST00000533299 CCDC85AQ96PX6 553 aaPredicted RBP6.37□□□□□ -1.39
LMO7-223ENST00000533299 PLVAPQ9BX97 442 aa6.37□□□□□ -1.39
LMO7-223ENST00000533299 TMPRSS4Q9NRS4 437 aa6.37□□□□□ -1.39
LMO7-223ENST00000533299 SPATA31C2B4DYI2 1134 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 ATP1A2P50993 1020 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 POU4F2Q12837 409 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 NCOA4Q13772 614 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 CFAP70Q5T0N1 1121 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 NBPF10Q6P3W6 841 aaKnown RBP6.36□□□□□ -1.39
LMO7-223ENST00000533299 NBPF15Q8N660 670 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 TRIM11Q96F44 468 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 CC2D2BQ6DHV5 1058 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 CHSY3Q70JA7 882 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 NACC1Q96RE7 527 aa6.36□□□□□ -1.39
LMO7-223ENST00000533299 ATXN7L1Q9ULK2 861 aaPredicted RBP6.36□□□□□ -1.39
LMO7-223ENST00000533299 RBM19Q9Y4C8 960 aaKnown RBP6.36□□□□□ -1.39
LMO7-223ENST00000533299 C2CD2LO14523 706 aa6.35□□□□□ -1.39
LMO7-223ENST00000533299 PRRT3Q5FWE3 981 aa6.35□□□□□ -1.39
LMO7-223ENST00000533299 LARP1Q6PKG0 1096 aaKnown RBP6.35□□□□□ -1.39
LMO7-223ENST00000533299 DEPDC4Q8N2C3 294 aa6.35□□□□□ -1.39
LMO7-223ENST00000533299 TIMMDC1Q9NPL8 285 aa6.35□□□□□ -1.39
LMO7-223ENST00000533299 MKRN1Q9UHC7 482 aaKnown RBP6.35□□□□□ -1.39
LMO7-223ENST00000533299 PDE4CQ08493 712 aa6.34□□□□□ -1.39
LMO7-223ENST00000533299 THBS1P07996 1170 aa6.34□□□□□ -1.4
LMO7-223ENST00000533299 ERVK-9P63128 1117 aa6.34□□□□□ -1.4
LMO7-223ENST00000533299 TSGA10IPQ3SY00 556 aa6.33□□□□□ -1.4
LMO7-223ENST00000533299 CYP2U1Q7Z449 544 aa6.33□□□□□ -1.4
LMO7-223ENST00000533299 ARXQ96QS3 562 aa6.33□□□□□ -1.4
LMO7-223ENST00000533299 GRIP2Q9C0E4 1043 aa6.33□□□□□ -1.4
LMO7-223ENST00000533299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.32□□□□□ -1.4
LMO7-223ENST00000533299 RASA1P20936 1047 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 PSME1Q06323 249 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 CDCA7Q9BWT1 371 aaPredicted RBP6.32□□□□□ -1.4
LMO7-223ENST00000533299 CYLDQ9NQC7 956 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 FAM196BA6NMK8 535 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 GTF2IP78347 998 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 UBAP2LQ14157 1087 aaKnown RBP6.32□□□□□ -1.4
LMO7-223ENST00000533299 SLC27A3Q5K4L6 730 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 KANK4Q5T7N3 995 aaPredicted RBP6.32□□□□□ -1.4
LMO7-223ENST00000533299 LARGE2Q8N3Y3 721 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 DNAAF2Q9NVR5 837 aaKnown RBP6.32□□□□□ -1.4
LMO7-223ENST00000533299 RNF112Q9ULX5 631 aa6.32□□□□□ -1.4
LMO7-223ENST00000533299 ATG7O95352 703 aa6.31□□□□□ -1.4
LMO7-223ENST00000533299 CSB-PGBD3P0DP91 1061 aa6.31□□□□□ -1.4
LMO7-223ENST00000533299 IRAK1P51617 712 aa6.31□□□□□ -1.4
LMO7-223ENST00000533299 OGFOD1Q8N543 542 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms