RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 ZNF496Q96IT1 587 aaPredicted RBP12□□□□□ -0.49
NECTIN1-207ENST00000532197 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
NECTIN1-207ENST00000532197 RFC4P35249 363 aa11.99□□□□□ -0.49
NECTIN1-207ENST00000532197 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
NECTIN1-207ENST00000532197 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
NECTIN1-207ENST00000532197 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
NECTIN1-207ENST00000532197 ARHGEF1Q92888 912 aaKnown RBP11.99□□□□□ -0.49
NECTIN1-207ENST00000532197 RUNDC1Q96C34 613 aa11.99□□□□□ -0.49
NECTIN1-207ENST00000532197 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
NECTIN1-207ENST00000532197 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
NECTIN1-207ENST00000532197 SOS1Q07889 1333 aaPredicted RBP11.97□□□□□ -0.49
NECTIN1-207ENST00000532197 DCTN1Q14203 1278 aa11.97□□□□□ -0.49
NECTIN1-207ENST00000532197 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
NECTIN1-207ENST00000532197 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
NECTIN1-207ENST00000532197 COL15A1P39059 1388 aa11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 USP42Q9H9J4 1324 aaKnown RBP11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 ANP32CO43423 234 aa11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 SNRPA1P09661 255 aaKnown RBP11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 GYS1P13807 737 aa11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 RIPK4P57078 832 aa11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
NECTIN1-207ENST00000532197 SCN7AQ01118 1682 aa11.96□□□□□ -0.5
NECTIN1-207ENST00000532197 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
NECTIN1-207ENST00000532197 A0A087WZG4 1122 aa11.95□□□□□ -0.5
NECTIN1-207ENST00000532197 KCNQ3O43525 872 aa11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 ZPR1O75312 459 aa11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 IL6STP40189 918 aaPredicted RBP11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 TGFB2P61812 414 aa11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 ZBTB1Q9Y2K1 713 aa11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 AFDNP55196 1824 aaKnown RBP11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 NRXN2Q9P2S2 1712 aa11.94□□□□□ -0.5
NECTIN1-207ENST00000532197 ADCY9O60503 1353 aa11.93□□□□□ -0.5
NECTIN1-207ENST00000532197 MMP10P09238 476 aa11.93□□□□□ -0.5
NECTIN1-207ENST00000532197 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
NECTIN1-207ENST00000532197 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
NECTIN1-207ENST00000532197 RGL2O15211 777 aa11.92□□□□□ -0.5
NECTIN1-207ENST00000532197 CANXP27824 592 aaKnown RBP11.92□□□□□ -0.5
NECTIN1-207ENST00000532197 CCDC146Q8IYE0 955 aa11.92□□□□□ -0.5
NECTIN1-207ENST00000532197 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 USP16Q9Y5T5 823 aa11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 PARP3Q9Y6F1 533 aa11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 C10orf71Q711Q0 1435 aa11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 ATP10DQ9P241 1426 aa11.91□□□□□ -0.5
NECTIN1-207ENST00000532197 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 GOLGB1Q14789 3259 aaKnown RBP11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 A1BGP04217 495 aa11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 TM4SF1P30408 202 aa11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 CALD1Q05682 793 aaKnown RBP11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 FKBP8Q14318 412 aa11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 NUP98P52948 1817 aa11.9□□□□□ -0.5
NECTIN1-207ENST00000532197 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 CHL1O00533 1208 aa11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 NEUROD2Q15784 382 aa11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 GPBP1L1Q9HC44 474 aaPredicted RBP11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 RRP7AQ9Y3A4 280 aaKnown RBP11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
NECTIN1-207ENST00000532197 ARFGEF1Q9Y6D6 1849 aa11.88□□□□□ -0.51
NECTIN1-207ENST00000532197 APAF1O14727 1248 aa11.88□□□□□ -0.51
NECTIN1-207ENST00000532197 CCDC184Q52MB2 194 aa11.88□□□□□ -0.51
NECTIN1-207ENST00000532197 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
NECTIN1-207ENST00000532197 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
NECTIN1-207ENST00000532197 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
NECTIN1-207ENST00000532197 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
NECTIN1-207ENST00000532197 DDR1Q08345 913 aa11.87□□□□□ -0.51
NECTIN1-207ENST00000532197 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
NECTIN1-207ENST00000532197 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
NECTIN1-207ENST00000532197 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
NECTIN1-207ENST00000532197 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 CAMTA2O94983 1202 aa11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 HOXB7P09629 217 aa11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 NFIXQ14938 502 aa11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 ZNF652Q9Y2D9 606 aa11.86□□□□□ -0.51
NECTIN1-207ENST00000532197 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 GNAI1P63096 354 aa11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 ZNF330Q9Y3S2 320 aaPredicted RBP11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
NECTIN1-207ENST00000532197 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
NECTIN1-207ENST00000532197 A0A0G2JLW4 131 aa11.83□□□□□ -0.52
NECTIN1-207ENST00000532197 ERVV-1B6SEH8 477 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms