RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 ADRA2BP18089 450 aa27.13■■□□□ 1.93
CCS-207ENST00000531990 EIF4A1P60842 406 aaKnown RBP27.13■■□□□ 1.93
CCS-207ENST00000531990 TRAPPC3LQ5T215 181 aa27.13■■□□□ 1.93
CCS-207ENST00000531990 MTFR1LQ9H019 292 aa27.13■■□□□ 1.93
CCS-207ENST00000531990 CHL1O00533 1208 aa27.12■■□□□ 1.93
CCS-207ENST00000531990 INTS5Q6P9B9 1019 aaKnown RBP27.12■■□□□ 1.93
CCS-207ENST00000531990 NGEFQ8N5V2 710 aa27.12■■□□□ 1.93
CCS-207ENST00000531990 CFAP44Q96MT7 982 aa27.12■■□□□ 1.93
CCS-207ENST00000531990 GNAI1P63096 354 aa27.11■■□□□ 1.93
CCS-207ENST00000531990 AMIGO3Q86WK7 504 aa27.11■■□□□ 1.93
CCS-207ENST00000531990 LRP5O75197 1615 aa27.11■■□□□ 1.93
CCS-207ENST00000531990 LAMB4A4D0S4 1761 aa27.1■■□□□ 1.93
CCS-207ENST00000531990 WWC1Q8IX03 1113 aa27.1■■□□□ 1.93
CCS-207ENST00000531990 IFT57Q9NWB7 429 aa27.1■■□□□ 1.93
CCS-207ENST00000531990 SALL2Q9Y467 1007 aaPredicted RBP27.1■■□□□ 1.93
CCS-207ENST00000531990 SMIM5Q71RC9 77 aa27.09■■□□□ 1.93
CCS-207ENST00000531990 ATF5Q9Y2D1 282 aaPredicted RBP27.09■■□□□ 1.93
CCS-207ENST00000531990 ZBTB1Q9Y2K1 713 aa27.09■■□□□ 1.93
CCS-207ENST00000531990 GIGYF1O75420 1035 aaPredicted RBP27.08■■□□□ 1.93
CCS-207ENST00000531990 USP16Q9Y5T5 823 aa27.08■■□□□ 1.93
CCS-207ENST00000531990 PRAMEF22A3QJZ6 481 aa27.07■■□□□ 1.92
CCS-207ENST00000531990 CANXP27824 592 aaKnown RBP27.07■■□□□ 1.92
CCS-207ENST00000531990 RFC4P35249 363 aa27.07■■□□□ 1.92
CCS-207ENST00000531990 SOS1Q07889 1333 aaPredicted RBP27.07■■□□□ 1.92
CCS-207ENST00000531990 NPM2Q86SE8 214 aaKnown RBP27.06■■□□□ 1.92
CCS-207ENST00000531990 ARHGEF1Q92888 912 aaKnown RBP27.06■■□□□ 1.92
CCS-207ENST00000531990 C4AP0C0L4 1744 aa27.05■■□□□ 1.92
CCS-207ENST00000531990 ZNF853P0CG23 659 aa27.05■■□□□ 1.92
CCS-207ENST00000531990 A1BGP04217 495 aa27.04■■□□□ 1.92
CCS-207ENST00000531990 MBIPQ9NS73 344 aa27.04■■□□□ 1.92
CCS-207ENST00000531990 POLD1P28340 1107 aa27.03■■□□□ 1.92
CCS-207ENST00000531990 COL15A1P39059 1388 aa27.03■■□□□ 1.92
CCS-207ENST00000531990 IL16Q14005 1332 aa27.03■■□□□ 1.92
CCS-207ENST00000531990 WDR63Q8IWG1 891 aa27.03■■□□□ 1.92
CCS-207ENST00000531990 A0A087WZG4 1122 aa27.02■■□□□ 1.92
CCS-207ENST00000531990 IL6STP40189 918 aaPredicted RBP27.02■■□□□ 1.92
CCS-207ENST00000531990 PPP1R1BQ9UD71 204 aaPredicted RBP27.02■■□□□ 1.92
CCS-207ENST00000531990 ZNF330Q9Y3S2 320 aaPredicted RBP27.02■■□□□ 1.92
CCS-207ENST00000531990 SRCAPQ6ZRS2 3230 aa27.01■■□□□ 1.91
CCS-207ENST00000531990 MSL1Q68DK7 614 aa27.01■■□□□ 1.91
CCS-207ENST00000531990 COL24A1Q17RW2 1714 aa27.01■■□□□ 1.91
CCS-207ENST00000531990 ZPR1O75312 459 aa27■■□□□ 1.91
CCS-207ENST00000531990 EIF5P55010 431 aaKnown RBP27■■□□□ 1.91
CCS-207ENST00000531990 PTGER2P43116 358 aa26.99■■□□□ 1.91
CCS-207ENST00000531990 USP42Q9H9J4 1324 aaKnown RBP26.97■■□□□ 1.91
CCS-207ENST00000531990 EIF2S2P20042 333 aaKnown RBP26.97■■□□□ 1.91
CCS-207ENST00000531990 NLGN1Q8N2Q7 840 aa26.97■■□□□ 1.91
CCS-207ENST00000531990 ERBB4Q15303 1308 aa26.96■■□□□ 1.91
CCS-207ENST00000531990 HOXB7P09629 217 aa26.96■■□□□ 1.91
CCS-207ENST00000531990 PIP4K2AP48426 406 aaPredicted RBP26.96■■□□□ 1.91
CCS-207ENST00000531990 KRT24Q2M2I5 525 aa26.96■■□□□ 1.91
CCS-207ENST00000531990 ARXQ96QS3 562 aa26.96■■□□□ 1.91
CCS-207ENST00000531990 SGIP1Q9BQI5 828 aa26.96■■□□□ 1.91
CCS-207ENST00000531990 SRP68Q9UHB9 627 aaKnown RBP26.96■■□□□ 1.91
CCS-207ENST00000531990 NARFQ9UHQ1 456 aa26.96■■□□□ 1.91
CCS-207ENST00000531990 GYS1P13807 737 aa26.95■■□□□ 1.9
CCS-207ENST00000531990 NBPF26B4DH59 902 aa26.94■■□□□ 1.9
CCS-207ENST00000531990 DUSP27Q5VZP5 1158 aa26.94■■□□□ 1.9
CCS-207ENST00000531990 NBPF10Q6P3W6 841 aaKnown RBP26.94■■□□□ 1.9
CCS-207ENST00000531990 NBPF15Q8N660 670 aa26.94■■□□□ 1.9
CCS-207ENST00000531990 TSR2Q969E8 191 aaKnown RBP26.94■■□□□ 1.9
CCS-207ENST00000531990 USPL1Q5W0Q7 1092 aa26.93■■□□□ 1.9
CCS-207ENST00000531990 MYH16Q9H6N6 1097 aa26.92■■□□□ 1.9
CCS-207ENST00000531990 TBC1D2BQ9UPU7 963 aa26.92■■□□□ 1.9
CCS-207ENST00000531990 HDGFL1Q5TGJ6 251 aa26.91■■□□□ 1.9
CCS-207ENST00000531990 DZIP3Q86Y13 1208 aaKnown RBP26.91■■□□□ 1.9
CCS-207ENST00000531990 NECTIN2Q92692 538 aa26.91■■□□□ 1.9
CCS-207ENST00000531990 CHMP4AQ9BY43 222 aa26.91■■□□□ 1.9
CCS-207ENST00000531990 SCN7AQ01118 1682 aa26.9■■□□□ 1.9
CCS-207ENST00000531990 MYL6BP14649 208 aa26.9■■□□□ 1.9
CCS-207ENST00000531990 GOLGA2Q08379 1002 aa26.9■■□□□ 1.9
CCS-207ENST00000531990 ZNF521Q96K83 1311 aa26.9■■□□□ 1.9
CCS-207ENST00000531990 FANCIQ9NVI1 1328 aa26.9■■□□□ 1.9
CCS-207ENST00000531990 ELL2O00472 640 aaPredicted RBP26.89■■□□□ 1.9
CCS-207ENST00000531990 FKBP8Q14318 412 aa26.89■■□□□ 1.9
CCS-207ENST00000531990 C8orf58Q8NAV2 365 aa26.89■■□□□ 1.9
CCS-207ENST00000531990 MMP10P09238 476 aa26.88■■□□□ 1.89
CCS-207ENST00000531990 BCORQ6W2J9 1755 aa26.87■■□□□ 1.89
CCS-207ENST00000531990 PARP3Q9Y6F1 533 aa26.86■■□□□ 1.89
CCS-207ENST00000531990 CAMTA2O94983 1202 aa26.85■■□□□ 1.89
CCS-207ENST00000531990 KIF6Q6ZMV9 814 aa26.85■■□□□ 1.89
CCS-207ENST00000531990 KLHL34Q8N239 644 aa26.85■■□□□ 1.89
CCS-207ENST00000531990 DDX21Q9NR30 783 aaKnown RBP eCLIP26.85■■□□□ 1.89
CCS-207ENST00000531990 DBF4Q9UBU7 674 aaPredicted RBP26.85■■□□□ 1.89
CCS-207ENST00000531990 ZNF652Q9Y2D9 606 aa26.85■■□□□ 1.89
CCS-207ENST00000531990 PDIA6Q15084 440 aa26.84■■□□□ 1.89
CCS-207ENST00000531990 TWISTNBQ3B726 338 aaPredicted RBP26.84■■□□□ 1.89
CCS-207ENST00000531990 BCL2L12Q9HB09 334 aa26.84■■□□□ 1.89
CCS-207ENST00000531990 SPINK5Q9NQ38 1064 aaPredicted RBP26.84■■□□□ 1.89
CCS-207ENST00000531990 CHPF2Q9P2E5 772 aa26.84■■□□□ 1.89
CCS-207ENST00000531990 E9PSI1 815 aa26.83■■□□□ 1.89
CCS-207ENST00000531990 TSPYL6Q8N831 410 aa26.83■■□□□ 1.89
CCS-207ENST00000531990 ANXA1P04083 346 aa26.82■■□□□ 1.88
CCS-207ENST00000531990 PROSER3Q2NL68 480 aa26.82■■□□□ 1.88
CCS-207ENST00000531990 CCDC30Q5VVM6 783 aa26.82■■□□□ 1.88
CCS-207ENST00000531990 FHDC1Q9C0D6 1143 aaPredicted RBP26.82■■□□□ 1.88
CCS-207ENST00000531990 RGL2O15211 777 aa26.81■■□□□ 1.88
CCS-207ENST00000531990 HNRNPUQ00839 825 aaKnown RBP eCLIP26.81■■□□□ 1.88
CCS-207ENST00000531990 EXOSC9Q06265 439 aaKnown RBP26.81■■□□□ 1.88
CCS-207ENST00000531990 CLEC4GQ6UXB4 293 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms