RNA–Protein interactions for RNA: ENST00000531897.5

PUF60-216, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-216ENST00000531897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.21■■■□□ 2.27
PUF60-216ENST00000531897 MSH5O43196 834 aa29.21■■■□□ 2.27
PUF60-216ENST00000531897 WDR63Q8IWG1 891 aa29.21■■■□□ 2.27
PUF60-216ENST00000531897 PHF14O94880 888 aa29.2■■■□□ 2.26
PUF60-216ENST00000531897 ZNF853P0CG23 659 aa29.2■■■□□ 2.26
PUF60-216ENST00000531897 LAMB4A4D0S4 1761 aa29.2■■■□□ 2.26
PUF60-216ENST00000531897 TRAPPC3LQ5T215 181 aa29.19■■■□□ 2.26
PUF60-216ENST00000531897 INTS5Q6P9B9 1019 aaKnown RBP29.19■■■□□ 2.26
PUF60-216ENST00000531897 MYH14Q7Z406 1995 aaKnown RBP29.19■■■□□ 2.26
PUF60-216ENST00000531897 GIGYF1O75420 1035 aaPredicted RBP29.18■■■□□ 2.26
PUF60-216ENST00000531897 MTFR1LQ9H019 292 aa29.18■■■□□ 2.26
PUF60-216ENST00000531897 SALL2Q9Y467 1007 aaPredicted RBP29.18■■■□□ 2.26
PUF60-216ENST00000531897 SENP3-EIF4A1A0A087X0R7 540 aa29.17■■■□□ 2.26
PUF60-216ENST00000531897 NPM2Q86SE8 214 aaKnown RBP29.17■■■□□ 2.26
PUF60-216ENST00000531897 COL23A1Q86Y22 540 aaPredicted RBP29.17■■■□□ 2.26
PUF60-216ENST00000531897 MBIPQ9NS73 344 aa29.17■■■□□ 2.26
PUF60-216ENST00000531897 SPON1Q9HCB6 807 aa29.16■■■□□ 2.26
PUF60-216ENST00000531897 ZBTB1Q9Y2K1 713 aa29.16■■■□□ 2.26
PUF60-216ENST00000531897 USP16Q9Y5T5 823 aa29.15■■■□□ 2.26
PUF60-216ENST00000531897 SOS1Q07889 1333 aaPredicted RBP29.15■■■□□ 2.26
PUF60-216ENST00000531897 HOXB7P09629 217 aa29.14■■■□□ 2.26
PUF60-216ENST00000531897 RFC4P35249 363 aa29.14■■■□□ 2.26
PUF60-216ENST00000531897 PDGFDQ9GZP0 370 aaPredicted RBP29.14■■■□□ 2.26
PUF60-216ENST00000531897 A0A087WZG4 1122 aa29.13■■■□□ 2.25
PUF60-216ENST00000531897 CANXP27824 592 aaKnown RBP29.13■■■□□ 2.25
PUF60-216ENST00000531897 LRP5O75197 1615 aa29.12■■■□□ 2.25
PUF60-216ENST00000531897 PRAMEF22A3QJZ6 481 aa29.12■■■□□ 2.25
PUF60-216ENST00000531897 ZBTB7AO95365 584 aa29.12■■■□□ 2.25
PUF60-216ENST00000531897 IL6STP40189 918 aaPredicted RBP29.12■■■□□ 2.25
PUF60-216ENST00000531897 AMIGO3Q86WK7 504 aa29.12■■■□□ 2.25
PUF60-216ENST00000531897 CHMP4AQ9BY43 222 aa29.12■■■□□ 2.25
PUF60-216ENST00000531897 ERBB4Q15303 1308 aa29.12■■■□□ 2.25
PUF60-216ENST00000531897 COL15A1P39059 1388 aa29.12■■■□□ 2.25
PUF60-216ENST00000531897 ARHGEF1Q92888 912 aaKnown RBP29.11■■■□□ 2.25
PUF60-216ENST00000531897 MYH16Q9H6N6 1097 aa29.1■■■□□ 2.25
PUF60-216ENST00000531897 A1BGP04217 495 aa29.09■■■□□ 2.25
PUF60-216ENST00000531897 EIF5P55010 431 aaKnown RBP29.09■■■□□ 2.25
PUF60-216ENST00000531897 POLD1P28340 1107 aa29.08■■■□□ 2.25
PUF60-216ENST00000531897 ZNF521Q96K83 1311 aa29.08■■■□□ 2.25
PUF60-216ENST00000531897 C4AP0C0L4 1744 aa29.08■■■□□ 2.25
PUF60-216ENST00000531897 ZPR1O75312 459 aa29.07■■■□□ 2.24
PUF60-216ENST00000531897 USP42Q9H9J4 1324 aaKnown RBP29.06■■■□□ 2.24
PUF60-216ENST00000531897 SMIM5Q71RC9 77 aa29.06■■■□□ 2.24
PUF60-216ENST00000531897 ATF5Q9Y2D1 282 aaPredicted RBP29.06■■■□□ 2.24
PUF60-216ENST00000531897 ZNF330Q9Y3S2 320 aaPredicted RBP29.06■■■□□ 2.24
PUF60-216ENST00000531897 DUSP27Q5VZP5 1158 aa29.05■■■□□ 2.24
PUF60-216ENST00000531897 TSR2Q969E8 191 aaKnown RBP29.05■■■□□ 2.24
PUF60-216ENST00000531897 FANCIQ9NVI1 1328 aa29.04■■■□□ 2.24
PUF60-216ENST00000531897 EIF2S2P20042 333 aaKnown RBP29.04■■■□□ 2.24
PUF60-216ENST00000531897 GOLGA2Q08379 1002 aa29.04■■■□□ 2.24
PUF60-216ENST00000531897 NLGN1Q8N2Q7 840 aa29.04■■■□□ 2.24
PUF60-216ENST00000531897 COL24A1Q17RW2 1714 aa29.03■■■□□ 2.24
PUF60-216ENST00000531897 HDGFL1Q5TGJ6 251 aa29.03■■■□□ 2.24
PUF60-216ENST00000531897 NARFQ9UHQ1 456 aa29.03■■■□□ 2.24
PUF60-216ENST00000531897 KRT24Q2M2I5 525 aa29.02■■■□□ 2.24
PUF60-216ENST00000531897 PPP1R1BQ9UD71 204 aaPredicted RBP29.01■■■□□ 2.23
PUF60-216ENST00000531897 NBPF26B4DH59 902 aa29■■■□□ 2.23
PUF60-216ENST00000531897 E9PSI1 815 aa29■■■□□ 2.23
PUF60-216ENST00000531897 GYS1P13807 737 aa29■■■□□ 2.23
PUF60-216ENST00000531897 NBPF10Q6P3W6 841 aaKnown RBP29■■■□□ 2.23
PUF60-216ENST00000531897 NBPF15Q8N660 670 aa29■■■□□ 2.23
PUF60-216ENST00000531897 PTGER2P43116 358 aa28.99■■■□□ 2.23
PUF60-216ENST00000531897 MSL1Q68DK7 614 aa28.99■■■□□ 2.23
PUF60-216ENST00000531897 PIP4K2AP48426 406 aaPredicted RBP28.98■■■□□ 2.23
PUF60-216ENST00000531897 USPL1Q5W0Q7 1092 aa28.98■■■□□ 2.23
PUF60-216ENST00000531897 DZIP3Q86Y13 1208 aaKnown RBP28.98■■■□□ 2.23
PUF60-216ENST00000531897 ARXQ96QS3 562 aa28.98■■■□□ 2.23
PUF60-216ENST00000531897 SGIP1Q9BQI5 828 aa28.98■■■□□ 2.23
PUF60-216ENST00000531897 SRP68Q9UHB9 627 aaKnown RBP28.98■■■□□ 2.23
PUF60-216ENST00000531897 SCN7AQ01118 1682 aa28.97■■■□□ 2.23
PUF60-216ENST00000531897 RGL2O15211 777 aa28.97■■■□□ 2.23
PUF60-216ENST00000531897 HNRNPUQ00839 825 aaKnown RBP eCLIP28.97■■■□□ 2.23
PUF60-216ENST00000531897 C8orf58Q8NAV2 365 aa28.97■■■□□ 2.23
PUF60-216ENST00000531897 DBF4Q9UBU7 674 aaPredicted RBP28.97■■■□□ 2.23
PUF60-216ENST00000531897 MYL6BP14649 208 aa28.96■■■□□ 2.23
PUF60-216ENST00000531897 TWISTNBQ3B726 338 aaPredicted RBP28.96■■■□□ 2.23
PUF60-216ENST00000531897 DDX21Q9NR30 783 aaKnown RBP eCLIP28.96■■■□□ 2.23
PUF60-216ENST00000531897 ZNF652Q9Y2D9 606 aa28.96■■■□□ 2.23
PUF60-216ENST00000531897 ELL2O00472 640 aaPredicted RBP28.95■■■□□ 2.22
PUF60-216ENST00000531897 CCDC30Q5VVM6 783 aa28.95■■■□□ 2.22
PUF60-216ENST00000531897 KIF6Q6ZMV9 814 aa28.95■■■□□ 2.22
PUF60-216ENST00000531897 NECTIN2Q92692 538 aa28.95■■■□□ 2.22
PUF60-216ENST00000531897 TBC1D2BQ9UPU7 963 aa28.95■■■□□ 2.22
PUF60-216ENST00000531897 SPINK5Q9NQ38 1064 aaPredicted RBP28.94■■■□□ 2.22
PUF60-216ENST00000531897 BCORQ6W2J9 1755 aa28.93■■■□□ 2.22
PUF60-216ENST00000531897 PDIA6Q15084 440 aa28.92■■■□□ 2.22
PUF60-216ENST00000531897 HYPKQ9NX55 129 aa28.92■■■□□ 2.22
PUF60-216ENST00000531897 CHPF2Q9P2E5 772 aa28.92■■■□□ 2.22
PUF60-216ENST00000531897 CAMTA2O94983 1202 aa28.91■■■□□ 2.22
PUF60-216ENST00000531897 MMP10P09238 476 aa28.91■■■□□ 2.22
PUF60-216ENST00000531897 EXOSC9Q06265 439 aaKnown RBP28.91■■■□□ 2.22
PUF60-216ENST00000531897 SLFN5Q08AF3 891 aa28.91■■■□□ 2.22
PUF60-216ENST00000531897 FKBP8Q14318 412 aa28.91■■■□□ 2.22
PUF60-216ENST00000531897 CLEC4GQ6UXB4 293 aa28.91■■■□□ 2.22
PUF60-216ENST00000531897 TSPYL6Q8N831 410 aa28.91■■■□□ 2.22
PUF60-216ENST00000531897 STK31Q9BXU1 1019 aa28.91■■■□□ 2.22
PUF60-216ENST00000531897 PARP3Q9Y6F1 533 aa28.9■■■□□ 2.22
PUF60-216ENST00000531897 ERVV-1B6SEH8 477 aa28.89■■■□□ 2.22
PUF60-216ENST00000531897 BCL2L12Q9HB09 334 aa28.88■■■□□ 2.21
PUF60-216ENST00000531897 MAP3K15Q6ZN16 1313 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms