RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ARID5AQ03989 594 aa6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 EHHADHQ08426 723 aa6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 ALG1LQ6GMV1 187 aa6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 DUSP9Q99956 384 aaKnown RBP6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 PKD2L1Q9P0L9 805 aa6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 VTI1BQ9UEU0 232 aa6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 SBNO2Q9Y2G9 1366 aa6.18□□□□□ -1.42
AC055878.1-201ENST00000531858 TSGA10IPQ3SY00 556 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 MSS51Q4VC12 460 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 RNF19BQ6ZMZ0 732 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 ZNF662Q6ZS27 426 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 NOL8Q76FK4 1167 aaKnown RBP6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 SH3BP5LQ7L8J4 393 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 VPS37DQ86XT2 251 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 DHX38Q92620 1227 aaKnown RBP6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 TRIM52Q96A61 297 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 FAM129BQ96TA1 746 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 MKNK1Q9BUB5 465 aa6.17□□□□□ -1.42
AC055878.1-201ENST00000531858 TERTO14746 1132 aaKnown RBP6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 NR1I2O75469 434 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 IBSPP21815 317 aaPredicted RBP6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 SMCPP49901 116 aaPredicted RBP6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 MTMR3Q13615 1198 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 CCDC181Q5TID7 509 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 ZNF654Q8IZM8 581 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 CYP4X1Q8N118 509 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 ZCRB1Q8TBF4 217 aaKnown RBP6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 TMC1Q8TDI8 760 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 FBF1Q8TES7 1133 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 THAP11Q96EK4 314 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 SLC6A16Q9GZN6 736 aa6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 CDV3Q9UKY7 258 aaKnown RBP6.16□□□□□ -1.42
AC055878.1-201ENST00000531858 MARCH6O60337 910 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 DXOO77932 396 aaKnown RBP6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 IGBP1P78318 339 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 NFE2L2Q16236 605 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 NBPF20Q3BBV1 942 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 PUS10Q3MIT2 529 aaKnown RBP6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 PLA2G2CQ5R387 149 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 KCNB2Q92953 911 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 VTI1AQ96AJ9 217 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 CRELD1Q96HD1 420 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 NUDT12Q9BQG2 462 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 CYLDQ9NQC7 956 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 TOR4AQ9NXH8 423 aa6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.15□□□□□ -1.42
AC055878.1-201ENST00000531858 IGHA2P01877 340 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 MPSTP25325 297 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 BRD2P25440 801 aaKnown RBP6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 HSD3B2P26439 372 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 GNA15P30679 374 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 MAPK8P45983 427 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 MMP16P51512 607 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 PTPROQ16827 1216 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 NBPF6Q5VWK0 638 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 ZNF746Q6NUN9 644 aaPredicted RBP6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 C16orf46Q6P387 395 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 TSEN2Q8NCE0 465 aaKnown RBP6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 NBPF4Q96M43 638 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 OSBPL2Q9H1P3 480 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 ACBD3Q9H3P7 528 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 ZSWIM4Q9H7M6 989 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 INPP5FQ9Y2H2 1132 aa6.14□□□□□ -1.43
AC055878.1-201ENST00000531858 hCG_2014768A0A024R1R8 64 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 ESPNB1AK53 854 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 WASLO00401 505 aaPredicted RBP6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 BACH1O14867 736 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 GIGYF1O75420 1035 aaPredicted RBP6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 MYCP01106 439 aaPredicted RBP6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 DNAJA1P31689 397 aaKnown RBP6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 USP5P45974 858 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 ENOX2Q16206 610 aaKnown RBP6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 SH3RF1Q7Z6J0 888 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 STAG2Q8N3U4 1231 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 ABTB2Q8N961 1025 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 MICAL1Q8TDZ2 1067 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 SPACA7Q96KW9 195 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 SENP2Q9HC62 589 aa6.13□□□□□ -1.43
AC055878.1-201ENST00000531858 STK10O94804 968 aaKnown RBP6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 EIF1AXP47813 144 aaKnown RBP6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 RPIAP49247 311 aa6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 PTPN12Q05209 780 aaKnown RBP6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 RNF187Q5TA31 235 aaPredicted RBP6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 CAPN12Q6ZSI9 719 aa6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 BPHLQ86WA6 291 aaPredicted RBP6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 SCUBE3Q8IX30 993 aa6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 STIM2Q9P246 746 aa6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 DDX41Q9UJV9 622 aaKnown RBP6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
AC055878.1-201ENST00000531858 PLEKHD1A6NEE1 506 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 FZD6O60353 706 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 RAB11FIP3O75154 756 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 SNRPBP14678 240 aaKnown RBP6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 NAA30Q147X3 362 aaPredicted RBP6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 CC2D2BQ6DHV5 1058 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 CERS3Q8IU89 383 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 MKL1Q969V6 931 aa6.11□□□□□ -1.43
AC055878.1-201ENST00000531858 FAM161BQ96MY7 647 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms