RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 POLD1P28340 1107 aa21.43■■□□□ 1.02
RELA-216ENST00000531238 USP16Q9Y5T5 823 aa21.43■■□□□ 1.02
RELA-216ENST00000531238 UTRNP46939 3433 aa21.42■■□□□ 1.02
RELA-216ENST00000531238 ADRA2BP18089 450 aa21.42■■□□□ 1.02
RELA-216ENST00000531238 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
RELA-216ENST00000531238 SRP68Q9UHB9 627 aaKnown RBP21.42■■□□□ 1.02
RELA-216ENST00000531238 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
RELA-216ENST00000531238 GYS1P13807 737 aa21.41■■□□□ 1.02
RELA-216ENST00000531238 STARD3NLO95772 234 aa21.4■■□□□ 1.02
RELA-216ENST00000531238 A1BGP04217 495 aa21.4■■□□□ 1.02
RELA-216ENST00000531238 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
RELA-216ENST00000531238 RFC4P35249 363 aa21.4■■□□□ 1.02
RELA-216ENST00000531238 GOLGB1Q14789 3259 aaKnown RBP21.39■■□□□ 1.02
RELA-216ENST00000531238 TEX13AQ9BXU3 409 aaPredicted RBP21.39■■□□□ 1.01
RELA-216ENST00000531238 APAF1O14727 1248 aa21.38■■□□□ 1.01
RELA-216ENST00000531238 EIF5P55010 431 aaKnown RBP21.38■■□□□ 1.01
RELA-216ENST00000531238 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
RELA-216ENST00000531238 SNRPA1P09661 255 aaKnown RBP21.37■■□□□ 1.01
RELA-216ENST00000531238 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
RELA-216ENST00000531238 USP42Q9H9J4 1324 aaKnown RBP21.36■■□□□ 1.01
RELA-216ENST00000531238 PIP4K2AP48426 406 aaPredicted RBP21.36■■□□□ 1.01
RELA-216ENST00000531238 FKBP8Q14318 412 aa21.36■■□□□ 1.01
RELA-216ENST00000531238 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
RELA-216ENST00000531238 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
RELA-216ENST00000531238 MMP10P09238 476 aa21.35■■□□□ 1.01
RELA-216ENST00000531238 USPL1Q5W0Q7 1092 aa21.35■■□□□ 1.01
RELA-216ENST00000531238 NLGN2Q8NFZ4 835 aa21.35■■□□□ 1.01
RELA-216ENST00000531238 BCL2L12Q9HB09 334 aa21.35■■□□□ 1.01
RELA-216ENST00000531238 GIGYF1O75420 1035 aaPredicted RBP21.34■■□□□ 1.01
RELA-216ENST00000531238 LMOD3Q0VAK6 560 aa21.34■■□□□ 1.01
RELA-216ENST00000531238 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
RELA-216ENST00000531238 NARFQ9UHQ1 456 aa21.33■■□□□ 1.01
RELA-216ENST00000531238 TSPYL4Q9UJ04 414 aa21.33■■□□□ 1.01
RELA-216ENST00000531238 COL15A1P39059 1388 aa21.33■■□□□ 1
RELA-216ENST00000531238 NBPF26B4DH59 902 aa21.32■■□□□ 1
RELA-216ENST00000531238 CHL1O00533 1208 aa21.32■■□□□ 1
RELA-216ENST00000531238 TM4SF1P30408 202 aa21.32■■□□□ 1
RELA-216ENST00000531238 IL6STP40189 918 aaPredicted RBP21.32■■□□□ 1
RELA-216ENST00000531238 NBPF10Q6P3W6 841 aaKnown RBP21.32■■□□□ 1
RELA-216ENST00000531238 NBPF15Q8N660 670 aa21.32■■□□□ 1
RELA-216ENST00000531238 C4AP0C0L4 1744 aa21.32■■□□□ 1
RELA-216ENST00000531238 TBC1D2BQ9UPU7 963 aa21.31■■□□□ 1
RELA-216ENST00000531238 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
RELA-216ENST00000531238 ZPR1O75312 459 aa21.3■■□□□ 1
RELA-216ENST00000531238 DDR1Q08345 913 aa21.3■■□□□ 1
RELA-216ENST00000531238 BABAM1Q9NWV8 329 aa21.3■■□□□ 1
RELA-216ENST00000531238 CD2APQ9Y5K6 639 aa21.29■■□□□ 1
RELA-216ENST00000531238 ZNF330Q9Y3S2 320 aaPredicted RBP21.28■■□□□ 1
RELA-216ENST00000531238 LAS1LQ9Y4W2 734 aaKnown RBP21.28■■□□□ 1
RELA-216ENST00000531238 KRT24Q2M2I5 525 aa21.27■■□□□ 1
RELA-216ENST00000531238 A0A087WZG4 1122 aa21.26■□□□□ 0.99
RELA-216ENST00000531238 POLRMTO00411 1230 aaKnown RBP21.26■□□□□ 0.99
RELA-216ENST00000531238 ZNF853P0CG23 659 aa21.26■□□□□ 0.99
RELA-216ENST00000531238 NFIXQ14938 502 aa21.26■□□□□ 0.99
RELA-216ENST00000531238 CAMTA2O94983 1202 aa21.25■□□□□ 0.99
RELA-216ENST00000531238 PARP3Q9Y6F1 533 aa21.25■□□□□ 0.99
RELA-216ENST00000531238 CFAP44Q96MT7 982 aa21.24■□□□□ 0.99
RELA-216ENST00000531238 TBC1D9BQ66K14 1250 aa21.23■□□□□ 0.99
RELA-216ENST00000531238 DZIP3Q86Y13 1208 aaKnown RBP21.23■□□□□ 0.99
RELA-216ENST00000531238 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
RELA-216ENST00000531238 PDIA6Q15084 440 aa21.22■□□□□ 0.99
RELA-216ENST00000531238 MBIPQ9NS73 344 aa21.22■□□□□ 0.99
RELA-216ENST00000531238 EIF2S2P20042 333 aaKnown RBP21.21■□□□□ 0.99
RELA-216ENST00000531238 BICDL1Q6ZP65 573 aa21.21■□□□□ 0.99
RELA-216ENST00000531238 LRP10Q7Z4F1 713 aa21.21■□□□□ 0.99
RELA-216ENST00000531238 NGEFQ8N5V2 710 aa21.21■□□□□ 0.99
RELA-216ENST00000531238 MYL6BP14649 208 aa21.2■□□□□ 0.98
RELA-216ENST00000531238 YBX3P16989 372 aaKnown RBP eCLIP21.2■□□□□ 0.984e-7■■■■□ 22.3
RELA-216ENST00000531238 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
RELA-216ENST00000531238 WWC1Q8IX03 1113 aa21.2■□□□□ 0.98
RELA-216ENST00000531238 A0A0G2JLW4 131 aa21.19■□□□□ 0.98
RELA-216ENST00000531238 SERPINB2P05120 415 aa21.19■□□□□ 0.98
RELA-216ENST00000531238 HLFQ16534 295 aa21.19■□□□□ 0.98
RELA-216ENST00000531238 PROSER3Q2NL68 480 aa21.19■□□□□ 0.98
RELA-216ENST00000531238 TTLL7Q6ZT98 887 aa21.19■□□□□ 0.98
RELA-216ENST00000531238 NECTIN2Q92692 538 aa21.19■□□□□ 0.98
RELA-216ENST00000531238 IFT57Q9NWB7 429 aa21.19■□□□□ 0.98
RELA-216ENST00000531238 SALL2Q9Y467 1007 aaPredicted RBP21.19■□□□□ 0.98
RELA-216ENST00000531238 ANXA1P04083 346 aa21.18■□□□□ 0.98
RELA-216ENST00000531238 KCNA3P22001 575 aa21.18■□□□□ 0.98
RELA-216ENST00000531238 GPR162Q16538 588 aa21.18■□□□□ 0.98
RELA-216ENST00000531238 WWC3Q9ULE0 1092 aa21.18■□□□□ 0.98
RELA-216ENST00000531238 C10orf71Q711Q0 1435 aa21.18■□□□□ 0.98
RELA-216ENST00000531238 TGFB2P61812 414 aa21.17■□□□□ 0.98
RELA-216ENST00000531238 NCBP3Q53F19 620 aaKnown RBP21.17■□□□□ 0.98
RELA-216ENST00000531238 NPM2Q86SE8 214 aaKnown RBP21.17■□□□□ 0.98
RELA-216ENST00000531238 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
RELA-216ENST00000531238 DCAF8L1A6NGE4 600 aa21.16■□□□□ 0.98
RELA-216ENST00000531238 DPEP1P16444 411 aa21.16■□□□□ 0.98
RELA-216ENST00000531238 GNAI1P63096 354 aa21.16■□□□□ 0.98
RELA-216ENST00000531238 LAMB4A4D0S4 1761 aa21.15■□□□□ 0.98
RELA-216ENST00000531238 PXDNLA1KZ92 1463 aa21.15■□□□□ 0.98
RELA-216ENST00000531238 DUSP27Q5VZP5 1158 aa21.15■□□□□ 0.98
RELA-216ENST00000531238 CLEC4GQ6UXB4 293 aa21.15■□□□□ 0.98
RELA-216ENST00000531238 C8orf58Q8NAV2 365 aa21.15■□□□□ 0.98
RELA-216ENST00000531238 CALD1Q05682 793 aaKnown RBP21.14■□□□□ 0.97
RELA-216ENST00000531238 CCDC24Q8N4L8 307 aa21.14■□□□□ 0.97
RELA-216ENST00000531238 KIF13BQ9NQT8 1826 aa21.13■□□□□ 0.97
RELA-216ENST00000531238 ERBB4Q15303 1308 aa21.13■□□□□ 0.97
RELA-216ENST00000531238 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms