RNA–Protein interactions for RNA: ENST00000531168.1

MMP8-204, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-204ENST00000531168 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
MMP8-204ENST00000531168 COL15A1P39059 1388 aa12.01□□□□□ -0.49
MMP8-204ENST00000531168 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
MMP8-204ENST00000531168 BTBD11A6QL63 1104 aa12□□□□□ -0.49
MMP8-204ENST00000531168 TTC5Q8N0Z6 440 aa12□□□□□ -0.49
MMP8-204ENST00000531168 MRS2Q9HD23 443 aa12□□□□□ -0.49
MMP8-204ENST00000531168 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
MMP8-204ENST00000531168 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
MMP8-204ENST00000531168 ARFGEF2Q9Y6D5 1785 aa12□□□□□ -0.49
MMP8-204ENST00000531168 MSL1Q68DK7 614 aa11.99□□□□□ -0.49
MMP8-204ENST00000531168 FMNL2Q96PY5 1086 aa11.99□□□□□ -0.49
MMP8-204ENST00000531168 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
MMP8-204ENST00000531168 RTCBQ9Y3I0 505 aaKnown RBP11.99□□□□□ -0.49
MMP8-204ENST00000531168 USP42Q9H9J4 1324 aaKnown RBP11.99□□□□□ -0.49
MMP8-204ENST00000531168 CACNA1SQ13698 1873 aa11.99□□□□□ -0.49
MMP8-204ENST00000531168 C10orf71Q711Q0 1435 aa11.98□□□□□ -0.49
MMP8-204ENST00000531168 PRAMEF22A3QJZ6 481 aa11.98□□□□□ -0.49
MMP8-204ENST00000531168 RIPK4P57078 832 aa11.98□□□□□ -0.49
MMP8-204ENST00000531168 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
MMP8-204ENST00000531168 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
MMP8-204ENST00000531168 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
MMP8-204ENST00000531168 ARXQ96QS3 562 aa11.98□□□□□ -0.49
MMP8-204ENST00000531168 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
MMP8-204ENST00000531168 GYS1P13807 737 aa11.97□□□□□ -0.49
MMP8-204ENST00000531168 LMOD3Q0VAK6 560 aa11.97□□□□□ -0.49
MMP8-204ENST00000531168 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
MMP8-204ENST00000531168 PPP1R1BQ9UD71 204 aaPredicted RBP11.97□□□□□ -0.49
MMP8-204ENST00000531168 CACNA1FO60840 1977 aa11.96□□□□□ -0.49
MMP8-204ENST00000531168 MSH5O43196 834 aa11.96□□□□□ -0.49
MMP8-204ENST00000531168 EIF5P55010 431 aaKnown RBP11.96□□□□□ -0.49
MMP8-204ENST00000531168 POLD1P28340 1107 aa11.95□□□□□ -0.5
MMP8-204ENST00000531168 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
MMP8-204ENST00000531168 TRAPPC3LQ5T215 181 aa11.95□□□□□ -0.5
MMP8-204ENST00000531168 SYT17Q9BSW7 474 aa11.95□□□□□ -0.5
MMP8-204ENST00000531168 TEX13AQ9BXU3 409 aaPredicted RBP11.95□□□□□ -0.5
MMP8-204ENST00000531168 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
MMP8-204ENST00000531168 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
MMP8-204ENST00000531168 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
MMP8-204ENST00000531168 LAMB2P55268 1798 aa11.95□□□□□ -0.5
MMP8-204ENST00000531168 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
MMP8-204ENST00000531168 APAF1O14727 1248 aa11.94□□□□□ -0.5
MMP8-204ENST00000531168 STARD3NLO95772 234 aa11.94□□□□□ -0.5
MMP8-204ENST00000531168 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
MMP8-204ENST00000531168 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
MMP8-204ENST00000531168 BABAM1Q9NWV8 329 aa11.94□□□□□ -0.5
MMP8-204ENST00000531168 USP16Q9Y5T5 823 aa11.94□□□□□ -0.5
MMP8-204ENST00000531168 GIGYF1O75420 1035 aaPredicted RBP11.93□□□□□ -0.5
MMP8-204ENST00000531168 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
MMP8-204ENST00000531168 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
MMP8-204ENST00000531168 NBPF26B4DH59 902 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 CHL1O00533 1208 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 A1BGP04217 495 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 MMP10P09238 476 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 ZNF853P0CG23 659 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 RFC4P35249 363 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 DDR1Q08345 913 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 FKBP8Q14318 412 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
MMP8-204ENST00000531168 NBPF15Q8N660 670 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
MMP8-204ENST00000531168 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
MMP8-204ENST00000531168 USPL1Q5W0Q7 1092 aa11.91□□□□□ -0.5
MMP8-204ENST00000531168 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
MMP8-204ENST00000531168 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
MMP8-204ENST00000531168 CAMTA2O94983 1202 aa11.9□□□□□ -0.5
MMP8-204ENST00000531168 TM4SF1P30408 202 aa11.9□□□□□ -0.5
MMP8-204ENST00000531168 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
MMP8-204ENST00000531168 CCDC27Q2M243 656 aa11.9□□□□□ -0.5
MMP8-204ENST00000531168 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
MMP8-204ENST00000531168 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
MMP8-204ENST00000531168 DDX60Q8IY21 1712 aaKnown RBP11.9□□□□□ -0.5
MMP8-204ENST00000531168 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 SBF1O95248 1867 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
MMP8-204ENST00000531168 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 CD2APQ9Y5K6 639 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 CARMIL3Q8ND23 1372 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
MMP8-204ENST00000531168 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
MMP8-204ENST00000531168 A0A087WZG4 1122 aa11.88□□□□□ -0.51
MMP8-204ENST00000531168 NFIXQ14938 502 aa11.88□□□□□ -0.51
MMP8-204ENST00000531168 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
MMP8-204ENST00000531168 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
MMP8-204ENST00000531168 IFT57Q9NWB7 429 aa11.88□□□□□ -0.51
MMP8-204ENST00000531168 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
MMP8-204ENST00000531168 RGL2O15211 777 aa11.87□□□□□ -0.51
MMP8-204ENST00000531168 ZPR1O75312 459 aa11.87□□□□□ -0.51
MMP8-204ENST00000531168 PDIA6Q15084 440 aa11.87□□□□□ -0.51
MMP8-204ENST00000531168 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
MMP8-204ENST00000531168 DZIP3Q86Y13 1208 aaKnown RBP11.86□□□□□ -0.51
MMP8-204ENST00000531168 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
MMP8-204ENST00000531168 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
MMP8-204ENST00000531168 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
MMP8-204ENST00000531168 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
MMP8-204ENST00000531168 HOXB7P09629 217 aa11.85□□□□□ -0.51
MMP8-204ENST00000531168 TBC1D9BQ66K14 1250 aa11.85□□□□□ -0.51
MMP8-204ENST00000531168 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms