RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.47
SF3B2-210ENST00000530981 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
SF3B2-210ENST00000530981 MSL1Q68DK7 614 aa12.08□□□□□ -0.48
SF3B2-210ENST00000530981 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
SF3B2-210ENST00000530981 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
SF3B2-210ENST00000530981 AK7Q96M32 723 aa12.08□□□□□ -0.48
SF3B2-210ENST00000530981 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
SF3B2-210ENST00000530981 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
SF3B2-210ENST00000530981 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
SF3B2-210ENST00000530981 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
SF3B2-210ENST00000530981 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
SF3B2-210ENST00000530981 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
SF3B2-210ENST00000530981 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
SF3B2-210ENST00000530981 LAS1LQ9Y4W2 734 aaKnown RBP12.07□□□□□ -0.48
SF3B2-210ENST00000530981 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
SF3B2-210ENST00000530981 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
SF3B2-210ENST00000530981 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
SF3B2-210ENST00000530981 LRP5O75197 1615 aa12.06□□□□□ -0.48
SF3B2-210ENST00000530981 MSH5O43196 834 aa12.05□□□□□ -0.48
SF3B2-210ENST00000530981 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
SF3B2-210ENST00000530981 SSFA2P28290 1259 aa12.05□□□□□ -0.48
SF3B2-210ENST00000530981 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
SF3B2-210ENST00000530981 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
SF3B2-210ENST00000530981 CCDC27Q2M243 656 aa12.05□□□□□ -0.48
SF3B2-210ENST00000530981 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
SF3B2-210ENST00000530981 CFAP44Q96MT7 982 aa12.05□□□□□ -0.48
SF3B2-210ENST00000530981 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
SF3B2-210ENST00000530981 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
SF3B2-210ENST00000530981 PDIA6Q15084 440 aa12.04□□□□□ -0.48
SF3B2-210ENST00000530981 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
SF3B2-210ENST00000530981 TRAPPC3LQ5T215 181 aa12.04□□□□□ -0.48
SF3B2-210ENST00000530981 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
SF3B2-210ENST00000530981 C8orf58Q8NAV2 365 aa12.04□□□□□ -0.48
SF3B2-210ENST00000530981 ZNF521Q96K83 1311 aa12.04□□□□□ -0.48
SF3B2-210ENST00000530981 ANXA1P04083 346 aa12.03□□□□□ -0.48
SF3B2-210ENST00000530981 GYS1P13807 737 aa12.03□□□□□ -0.48
SF3B2-210ENST00000530981 FKBP8Q14318 412 aa12.03□□□□□ -0.48
SF3B2-210ENST00000530981 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
SF3B2-210ENST00000530981 SPON1Q9HCB6 807 aa12.03□□□□□ -0.48
SF3B2-210ENST00000530981 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.48
SF3B2-210ENST00000530981 STARD3NLO95772 234 aa12.02□□□□□ -0.49
SF3B2-210ENST00000530981 NECTIN2Q92692 538 aa12.02□□□□□ -0.49
SF3B2-210ENST00000530981 IFT57Q9NWB7 429 aa12.02□□□□□ -0.49
SF3B2-210ENST00000530981 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.49
SF3B2-210ENST00000530981 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
SF3B2-210ENST00000530981 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.49
SF3B2-210ENST00000530981 COL15A1P39059 1388 aa12.02□□□□□ -0.49
SF3B2-210ENST00000530981 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
SF3B2-210ENST00000530981 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
SF3B2-210ENST00000530981 SLC16A10Q8TF71 515 aa12.01□□□□□ -0.49
SF3B2-210ENST00000530981 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
SF3B2-210ENST00000530981 EIF2S2P20042 333 aaKnown RBP12□□□□□ -0.49
SF3B2-210ENST00000530981 RFC4P35249 363 aa12□□□□□ -0.49
SF3B2-210ENST00000530981 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
SF3B2-210ENST00000530981 DDR1Q08345 913 aa12□□□□□ -0.49
SF3B2-210ENST00000530981 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
SF3B2-210ENST00000530981 DUSP27Q5VZP5 1158 aa12□□□□□ -0.49
SF3B2-210ENST00000530981 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
SF3B2-210ENST00000530981 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
SF3B2-210ENST00000530981 NARFQ9UHQ1 456 aa12□□□□□ -0.49
SF3B2-210ENST00000530981 ADRA2BP18089 450 aa11.99□□□□□ -0.49
SF3B2-210ENST00000530981 GNAI1P63096 354 aa11.99□□□□□ -0.49
SF3B2-210ENST00000530981 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
SF3B2-210ENST00000530981 NGEFQ8N5V2 710 aa11.99□□□□□ -0.49
SF3B2-210ENST00000530981 ZNF330Q9Y3S2 320 aaPredicted RBP11.99□□□□□ -0.49
SF3B2-210ENST00000530981 FANCIQ9NVI1 1328 aa11.98□□□□□ -0.49
SF3B2-210ENST00000530981 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
SF3B2-210ENST00000530981 MYL6BP14649 208 aa11.98□□□□□ -0.49
SF3B2-210ENST00000530981 TM4SF1P30408 202 aa11.98□□□□□ -0.49
SF3B2-210ENST00000530981 HLFQ16534 295 aa11.98□□□□□ -0.49
SF3B2-210ENST00000530981 WDR63Q8IWG1 891 aa11.98□□□□□ -0.49
SF3B2-210ENST00000530981 FHDC1Q9C0D6 1143 aaPredicted RBP11.98□□□□□ -0.49
SF3B2-210ENST00000530981 IL16Q14005 1332 aa11.97□□□□□ -0.49
SF3B2-210ENST00000530981 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
SF3B2-210ENST00000530981 MMP10P09238 476 aa11.97□□□□□ -0.49
SF3B2-210ENST00000530981 NFIXQ14938 502 aa11.97□□□□□ -0.49
SF3B2-210ENST00000530981 ARXQ96QS3 562 aa11.97□□□□□ -0.49
SF3B2-210ENST00000530981 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
SF3B2-210ENST00000530981 GOLGB1Q14789 3259 aaKnown RBP11.97□□□□□ -0.49
SF3B2-210ENST00000530981 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
SF3B2-210ENST00000530981 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.49
SF3B2-210ENST00000530981 SYT17Q9BSW7 474 aa11.96□□□□□ -0.49
SF3B2-210ENST00000530981 BCORQ6W2J9 1755 aa11.96□□□□□ -0.49
SF3B2-210ENST00000530981 SCN7AQ01118 1682 aa11.96□□□□□ -0.5
SF3B2-210ENST00000530981 AFDNP55196 1824 aaKnown RBP11.95□□□□□ -0.5
SF3B2-210ENST00000530981 UTRNP46939 3433 aa11.95□□□□□ -0.5
SF3B2-210ENST00000530981 POLRMTO00411 1230 aaKnown RBP11.95□□□□□ -0.5
SF3B2-210ENST00000530981 EXOSC9Q06265 439 aaKnown RBP11.95□□□□□ -0.5
SF3B2-210ENST00000530981 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
SF3B2-210ENST00000530981 NLGN1Q8N2Q7 840 aa11.95□□□□□ -0.5
SF3B2-210ENST00000530981 ZPR1O75312 459 aa11.94□□□□□ -0.5
SF3B2-210ENST00000530981 VAMP4O75379 141 aa11.94□□□□□ -0.5
SF3B2-210ENST00000530981 HMGB2P26583 209 aaKnown RBP11.94□□□□□ -0.5
SF3B2-210ENST00000530981 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
SF3B2-210ENST00000530981 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
SF3B2-210ENST00000530981 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
SF3B2-210ENST00000530981 CCDC24Q8N4L8 307 aa11.94□□□□□ -0.5
SF3B2-210ENST00000530981 PHAXQ9H814 394 aaKnown RBP11.94□□□□□ -0.5
SF3B2-210ENST00000530981 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
SF3B2-210ENST00000530981 NUP98P52948 1817 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms