RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 FMNL2Q96PY5 1086 aa24.71■■□□□ 1.55
GMDS-208ENST00000530927 SRP68Q9UHB9 627 aaKnown RBP24.71■■□□□ 1.55
GMDS-208ENST00000530927 KDM3BQ7LBC6 1761 aa24.71■■□□□ 1.55
GMDS-208ENST00000530927 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.55
GMDS-208ENST00000530927 SYT17Q9BSW7 474 aa24.69■■□□□ 1.54
GMDS-208ENST00000530927 SOS1Q07889 1333 aaPredicted RBP24.69■■□□□ 1.54
GMDS-208ENST00000530927 CANXP27824 592 aaKnown RBP24.68■■□□□ 1.54
GMDS-208ENST00000530927 TRIM35Q9UPQ4 493 aa24.68■■□□□ 1.54
GMDS-208ENST00000530927 GYS1P13807 737 aa24.67■■□□□ 1.54
GMDS-208ENST00000530927 ADRA2BP18089 450 aa24.67■■□□□ 1.54
GMDS-208ENST00000530927 RFC4P35249 363 aa24.67■■□□□ 1.54
GMDS-208ENST00000530927 PIP4K2AP48426 406 aaPredicted RBP24.67■■□□□ 1.54
GMDS-208ENST00000530927 USP16Q9Y5T5 823 aa24.67■■□□□ 1.54
GMDS-208ENST00000530927 A1BGP04217 495 aa24.66■■□□□ 1.54
GMDS-208ENST00000530927 MRS2Q9HD23 443 aa24.66■■□□□ 1.54
GMDS-208ENST00000530927 NLGN2Q8NFZ4 835 aa24.65■■□□□ 1.54
GMDS-208ENST00000530927 GOLGB1Q14789 3259 aaKnown RBP24.65■■□□□ 1.54
GMDS-208ENST00000530927 APAF1O14727 1248 aa24.64■■□□□ 1.54
GMDS-208ENST00000530927 STARD3NLO95772 234 aa24.64■■□□□ 1.54
GMDS-208ENST00000530927 COL15A1P39059 1388 aa24.64■■□□□ 1.54
GMDS-208ENST00000530927 USP42Q9H9J4 1324 aaKnown RBP24.63■■□□□ 1.53
GMDS-208ENST00000530927 PNISRQ8TF01 805 aaKnown RBP24.63■■□□□ 1.53
GMDS-208ENST00000530927 UTRNP46939 3433 aa24.63■■□□□ 1.53
GMDS-208ENST00000530927 MMP10P09238 476 aa24.62■■□□□ 1.53
GMDS-208ENST00000530927 FKBP8Q14318 412 aa24.62■■□□□ 1.53
GMDS-208ENST00000530927 ZNF330Q9Y3S2 320 aaPredicted RBP24.61■■□□□ 1.53
GMDS-208ENST00000530927 SNRPA1P09661 255 aaKnown RBP24.61■■□□□ 1.53
GMDS-208ENST00000530927 EIF4A1P60842 406 aaKnown RBP24.61■■□□□ 1.53
GMDS-208ENST00000530927 USPL1Q5W0Q7 1092 aa24.61■■□□□ 1.53
GMDS-208ENST00000530927 TEX13AQ9BXU3 409 aaPredicted RBP24.61■■□□□ 1.53
GMDS-208ENST00000530927 EIF5P55010 431 aaKnown RBP24.6■■□□□ 1.53
GMDS-208ENST00000530927 LMOD3Q0VAK6 560 aa24.6■■□□□ 1.53
GMDS-208ENST00000530927 TSPYL4Q9UJ04 414 aa24.6■■□□□ 1.53
GMDS-208ENST00000530927 BCL2L12Q9HB09 334 aa24.58■■□□□ 1.53
GMDS-208ENST00000530927 LAS1LQ9Y4W2 734 aaKnown RBP24.58■■□□□ 1.53
GMDS-208ENST00000530927 LAMB4A4D0S4 1761 aa24.58■■□□□ 1.52
GMDS-208ENST00000530927 NLGN1Q8N2Q7 840 aa24.57■■□□□ 1.52
GMDS-208ENST00000530927 NBPF26B4DH59 902 aa24.56■■□□□ 1.52
GMDS-208ENST00000530927 ZPR1O75312 459 aa24.56■■□□□ 1.52
GMDS-208ENST00000530927 GIGYF1O75420 1035 aaPredicted RBP24.56■■□□□ 1.52
GMDS-208ENST00000530927 DDR1Q08345 913 aa24.56■■□□□ 1.52
GMDS-208ENST00000530927 NBPF10Q6P3W6 841 aaKnown RBP24.56■■□□□ 1.52
GMDS-208ENST00000530927 NBPF15Q8N660 670 aa24.56■■□□□ 1.52
GMDS-208ENST00000530927 NARFQ9UHQ1 456 aa24.56■■□□□ 1.52
GMDS-208ENST00000530927 TBC1D2BQ9UPU7 963 aa24.56■■□□□ 1.52
GMDS-208ENST00000530927 KRT24Q2M2I5 525 aa24.54■■□□□ 1.52
GMDS-208ENST00000530927 IL6STP40189 918 aaPredicted RBP24.53■■□□□ 1.52
GMDS-208ENST00000530927 WWC3Q9ULE0 1092 aa24.53■■□□□ 1.52
GMDS-208ENST00000530927 SCN7AQ01118 1682 aa24.53■■□□□ 1.52
GMDS-208ENST00000530927 CHL1O00533 1208 aa24.51■■□□□ 1.51
GMDS-208ENST00000530927 TM4SF1P30408 202 aa24.51■■□□□ 1.51
GMDS-208ENST00000530927 CD2APQ9Y5K6 639 aa24.51■■□□□ 1.51
GMDS-208ENST00000530927 PARP3Q9Y6F1 533 aa24.51■■□□□ 1.51
GMDS-208ENST00000530927 NFIXQ14938 502 aa24.5■■□□□ 1.51
GMDS-208ENST00000530927 PELP1Q8IZL8 1130 aaKnown RBP24.5■■□□□ 1.51
GMDS-208ENST00000530927 FAM9BQ8IZU0 186 aa24.5■■□□□ 1.51
GMDS-208ENST00000530927 POLRMTO00411 1230 aaKnown RBP24.49■■□□□ 1.51
GMDS-208ENST00000530927 BICDL1Q6ZP65 573 aa24.49■■□□□ 1.51
GMDS-208ENST00000530927 BCORQ6W2J9 1755 aa24.49■■□□□ 1.51
GMDS-208ENST00000530927 KIAA1551Q9HCM1 1747 aa24.48■■□□□ 1.51
GMDS-208ENST00000530927 C10orf71Q711Q0 1435 aa24.48■■□□□ 1.51
GMDS-208ENST00000530927 A0A087WZG4 1122 aa24.48■■□□□ 1.51
GMDS-208ENST00000530927 CAMTA2O94983 1202 aa24.48■■□□□ 1.51
GMDS-208ENST00000530927 DZIP3Q86Y13 1208 aaKnown RBP24.48■■□□□ 1.51
GMDS-208ENST00000530927 NGEFQ8N5V2 710 aa24.48■■□□□ 1.51
GMDS-208ENST00000530927 NECTIN2Q92692 538 aa24.48■■□□□ 1.51
GMDS-208ENST00000530927 KIF13BQ9NQT8 1826 aa24.47■■□□□ 1.51
GMDS-208ENST00000530927 EIF2S2P20042 333 aaKnown RBP24.47■■□□□ 1.51
GMDS-208ENST00000530927 TBC1D9BQ66K14 1250 aa24.47■■□□□ 1.51
GMDS-208ENST00000530927 BABAM1Q9NWV8 329 aa24.47■■□□□ 1.51
GMDS-208ENST00000530927 SALL2Q9Y467 1007 aaPredicted RBP24.47■■□□□ 1.51
GMDS-208ENST00000530927 MBIPQ9NS73 344 aa24.46■■□□□ 1.51
GMDS-208ENST00000530927 N4BP2Q86UW6 1770 aaPredicted RBP24.46■■□□□ 1.51
GMDS-208ENST00000530927 AFDNP55196 1824 aaKnown RBP24.46■■□□□ 1.51
GMDS-208ENST00000530927 ANXA1P04083 346 aa24.45■■□□□ 1.51
GMDS-208ENST00000530927 MYL6BP14649 208 aa24.45■■□□□ 1.51
GMDS-208ENST00000530927 CFAP44Q96MT7 982 aa24.45■■□□□ 1.51
GMDS-208ENST00000530927 PXDNLA1KZ92 1463 aa24.45■■□□□ 1.5
GMDS-208ENST00000530927 ZNF853P0CG23 659 aa24.44■■□□□ 1.5
GMDS-208ENST00000530927 YBX3P16989 372 aaKnown RBP eCLIP24.44■■□□□ 1.59e-9■□□□□ 8.4
GMDS-208ENST00000530927 GPR162Q16538 588 aa24.44■■□□□ 1.5
GMDS-208ENST00000530927 PROSER3Q2NL68 480 aa24.44■■□□□ 1.5
GMDS-208ENST00000530927 NPM2Q86SE8 214 aaKnown RBP24.44■■□□□ 1.5
GMDS-208ENST00000530927 A0A0G2JLW4 131 aa24.42■■□□□ 1.5
GMDS-208ENST00000530927 TTLL7Q6ZT98 887 aa24.42■■□□□ 1.5
GMDS-208ENST00000530927 NRXN2Q9P2S2 1712 aa24.42■■□□□ 1.5
GMDS-208ENST00000530927 CARMIL3Q8ND23 1372 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 DCAF8L1A6NGE4 600 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 SERPINB2P05120 415 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 PDIA6Q15084 440 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 HLFQ16534 295 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 WWC1Q8IX03 1113 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 CCDC24Q8N4L8 307 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
GMDS-208ENST00000530927 DPEP1P16444 411 aa24.39■■□□□ 1.5
GMDS-208ENST00000530927 LRP10Q7Z4F1 713 aa24.39■■□□□ 1.5
GMDS-208ENST00000530927 TSR2Q969E8 191 aaKnown RBP24.38■■□□□ 1.49
GMDS-208ENST00000530927 ELL2O00472 640 aaPredicted RBP24.37■■□□□ 1.49
GMDS-208ENST00000530927 CHRNA5P30532 468 aa24.37■■□□□ 1.49
GMDS-208ENST00000530927 GNAI1P63096 354 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms