RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PI4KAP1Q8N8J0 262 aa21.05■□□□□ 0.96
BRCA2-204ENST00000530893 C19orf44Q9H6X5 657 aa21.05■□□□□ 0.96
BRCA2-204ENST00000530893 MCM2P49736 904 aa21.05■□□□□ 0.96
BRCA2-204ENST00000530893 PROSER2Q86WR7 435 aaPredicted RBP21.05■□□□□ 0.96
BRCA2-204ENST00000530893 CHMLP26374 656 aa21.04■□□□□ 0.96
BRCA2-204ENST00000530893 KIF1BPQ96EK5 621 aa21.04■□□□□ 0.96
BRCA2-204ENST00000530893 IL17RAQ96F46 866 aa21.04■□□□□ 0.96
BRCA2-204ENST00000530893 FOXD4L1Q9NU39 408 aa21.04■□□□□ 0.96
BRCA2-204ENST00000530893 ALS2Q96Q42 1657 aa21.04■□□□□ 0.96
BRCA2-204ENST00000530893 KCNQ3O43525 872 aa21.04■□□□□ 0.96
BRCA2-204ENST00000530893 ADCY9O60503 1353 aa21.04■□□□□ 0.96
BRCA2-204ENST00000530893 PLEKHG2Q9H7P9 1386 aa21.03■□□□□ 0.96
BRCA2-204ENST00000530893 TRIM6-TRIM34B2RNG4 842 aa21.03■□□□□ 0.96
BRCA2-204ENST00000530893 GIGYF1O75420 1035 aaPredicted RBP21.03■□□□□ 0.96
BRCA2-204ENST00000530893 SURF6O75683 361 aaKnown RBP21.03■□□□□ 0.96
BRCA2-204ENST00000530893 ALDH1L1O75891 902 aa21.03■□□□□ 0.96
BRCA2-204ENST00000530893 MTX1Q13505 466 aa21.03■□□□□ 0.96
BRCA2-204ENST00000530893 SRGAP3O43295 1099 aa21.02■□□□□ 0.96
BRCA2-204ENST00000530893 XPCQ01831 940 aaPredicted RBP21.02■□□□□ 0.96
BRCA2-204ENST00000530893 RHPN1Q8TCX5 695 aa21.02■□□□□ 0.96
BRCA2-204ENST00000530893 NBPF7P0C2Y1 421 aaPredicted RBP21.02■□□□□ 0.96
BRCA2-204ENST00000530893 LMOD2Q6P5Q4 547 aa21.02■□□□□ 0.96
BRCA2-204ENST00000530893 GZF1Q9H116 711 aaPredicted RBP21.02■□□□□ 0.96
BRCA2-204ENST00000530893 ERBB3P21860 1342 aa21.01■□□□□ 0.95
BRCA2-204ENST00000530893 TSHZ3Q63HK5 1081 aa21.01■□□□□ 0.95
BRCA2-204ENST00000530893 RILPL2Q969X0 211 aa21.01■□□□□ 0.95
BRCA2-204ENST00000530893 ABCC6O95255 1503 aa21.01■□□□□ 0.95
BRCA2-204ENST00000530893 CYP2E1P05181 493 aaPredicted RBP21■□□□□ 0.95
BRCA2-204ENST00000530893 SSFA2P28290 1259 aa21■□□□□ 0.95
BRCA2-204ENST00000530893 MRE11P49959 708 aa21■□□□□ 0.95
BRCA2-204ENST00000530893 HYPKQ9NX55 129 aa21■□□□□ 0.95
BRCA2-204ENST00000530893 AXIN2Q9Y2T1 843 aa21■□□□□ 0.95
BRCA2-204ENST00000530893 KSR2Q6VAB6 950 aa21■□□□□ 0.95
BRCA2-204ENST00000530893 DCCP43146 1447 aa21■□□□□ 0.95
BRCA2-204ENST00000530893 AK9Q5TCS8 1911 aa20.99■□□□□ 0.95
BRCA2-204ENST00000530893 IL1RAPL2Q9NP60 686 aa20.99■□□□□ 0.95
BRCA2-204ENST00000530893 RGPD5Q99666 1765 aa20.99■□□□□ 0.95
BRCA2-204ENST00000530893 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
BRCA2-204ENST00000530893 BAG4O95429 457 aaKnown RBP20.98■□□□□ 0.95
BRCA2-204ENST00000530893 XRCC6P12956 609 aaKnown RBP eCLIP20.98■□□□□ 0.95
BRCA2-204ENST00000530893 PI4K2BQ8TCG2 481 aa20.97■□□□□ 0.95
BRCA2-204ENST00000530893 ANO2Q9NQ90 1003 aa20.97■□□□□ 0.95
BRCA2-204ENST00000530893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.97■□□□□ 0.95
BRCA2-204ENST00000530893 MAP3K2Q9Y2U5 619 aa20.97■□□□□ 0.95
BRCA2-204ENST00000530893 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
BRCA2-204ENST00000530893 DDX58O95786 925 aaKnown RBP20.96■□□□□ 0.95
BRCA2-204ENST00000530893 NEK4P51957 841 aa20.96■□□□□ 0.95
BRCA2-204ENST00000530893 FAM43AQ8N2R8 423 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 RAPGEF4Q8WZA2 1011 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 DDX21Q9NR30 783 aaKnown RBP eCLIP20.95■□□□□ 0.94
BRCA2-204ENST00000530893 SCN11AQ9UI33 1791 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 CRYBG1Q9Y4K1 1723 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 KLHL40Q2TBA0 621 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 NUTM1Q86Y26 1132 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 ERC1Q8IUD2 1116 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 UNC5CLQ8IV45 518 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 CNTROBQ8N137 903 aa20.95■□□□□ 0.94
BRCA2-204ENST00000530893 C9orf78Q9NZ63 289 aaPredicted RBP20.95■□□□□ 0.94
BRCA2-204ENST00000530893 ANXA1P04083 346 aa20.94■□□□□ 0.94
BRCA2-204ENST00000530893 LINS1Q8NG48 757 aa20.94■□□□□ 0.94
BRCA2-204ENST00000530893 UTYO14607 1347 aa20.94■□□□□ 0.94
BRCA2-204ENST00000530893 ATF3P18847 181 aa20.94■□□□□ 0.94
BRCA2-204ENST00000530893 INTS4Q96HW7 963 aaKnown RBP20.93■□□□□ 0.94
BRCA2-204ENST00000530893 CUL4AQ13619 759 aa20.92■□□□□ 0.94
BRCA2-204ENST00000530893 GRPEL1Q9HAV7 217 aa20.92■□□□□ 0.94
BRCA2-204ENST00000530893 SPG7Q9UQ90 795 aa20.92■□□□□ 0.94
BRCA2-204ENST00000530893 NPHP3Q7Z494 1330 aa20.92■□□□□ 0.94
BRCA2-204ENST00000530893 GLRX3O76003 335 aaKnown RBP20.92■□□□□ 0.94
BRCA2-204ENST00000530893 HSPA4P34932 840 aa20.92■□□□□ 0.94
BRCA2-204ENST00000530893 CLASRPQ8N2M8 674 aaKnown RBP20.92■□□□□ 0.94
BRCA2-204ENST00000530893 TMX3Q96JJ7 454 aa20.92■□□□□ 0.94
BRCA2-204ENST00000530893 TATP17735 454 aaPredicted RBP20.91■□□□□ 0.94
BRCA2-204ENST00000530893 PROSER3Q2NL68 480 aa20.91■□□□□ 0.94
BRCA2-204ENST00000530893 ZNF790Q6PG37 636 aa20.91■□□□□ 0.94
BRCA2-204ENST00000530893 SLC52A2Q9HAB3 445 aa20.91■□□□□ 0.94
BRCA2-204ENST00000530893 RTN4Q9NQC3 1192 aaKnown RBP20.91■□□□□ 0.94
BRCA2-204ENST00000530893 COL18A1P39060 1754 aa20.91■□□□□ 0.94
BRCA2-204ENST00000530893 SGSM2O43147 1006 aa20.9■□□□□ 0.94
BRCA2-204ENST00000530893 ZC3H6P61129 1189 aaKnown RBP20.9■□□□□ 0.94
BRCA2-204ENST00000530893 OS9Q13438 667 aaPredicted RBP20.9■□□□□ 0.94
BRCA2-204ENST00000530893 ZGPATQ8N5A5 531 aaKnown RBP20.9■□□□□ 0.94
BRCA2-204ENST00000530893 PALD1Q9ULE6 856 aa20.9■□□□□ 0.94
BRCA2-204ENST00000530893 GRM8O00222 908 aa20.9■□□□□ 0.94
BRCA2-204ENST00000530893 GPATCH3Q96I76 525 aa20.9■□□□□ 0.94
BRCA2-204ENST00000530893 PLEKHG5O94827 1062 aa20.89■□□□□ 0.93
BRCA2-204ENST00000530893 DDX49Q9Y6V7 483 aaKnown RBP20.89■□□□□ 0.93
BRCA2-204ENST00000530893 RAD50Q92878 1312 aa20.89■□□□□ 0.93
BRCA2-204ENST00000530893 KDM6AO15550 1401 aaPredicted RBP20.89■□□□□ 0.93
BRCA2-204ENST00000530893 PHKG2P15735 406 aa20.88■□□□□ 0.93
BRCA2-204ENST00000530893 NLRP2Q9NX02 1062 aa20.88■□□□□ 0.93
BRCA2-204ENST00000530893 TMEM94Q12767 1356 aa20.88■□□□□ 0.93
BRCA2-204ENST00000530893 PDIA6Q15084 440 aa20.88■□□□□ 0.93
BRCA2-204ENST00000530893 MRC1P22897 1456 aa20.88■□□□□ 0.93
BRCA2-204ENST00000530893 LARP1Q6PKG0 1096 aaKnown RBP20.87■□□□□ 0.93
BRCA2-204ENST00000530893 IFNL2Q8IZJ0 200 aa20.87■□□□□ 0.93
BRCA2-204ENST00000530893 PRAMEF22A3QJZ6 481 aa20.87■□□□□ 0.93
BRCA2-204ENST00000530893 CWF19L2Q2TBE0 894 aaKnown RBP20.87■□□□□ 0.93
BRCA2-204ENST00000530893 MCTP1Q6DN14 999 aa20.87■□□□□ 0.93
BRCA2-204ENST00000530893 RUFY2Q8WXA3 655 aa20.87■□□□□ 0.93
BRCA2-204ENST00000530893 ECHDC1Q9NTX5 307 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms