RNA–Protein interactions for RNA: ENST00000530803.5

ALKBH3-207, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-207ENST00000530803 IFT57Q9NWB7 429 aa18.55■□□□□ 0.56
ALKBH3-207ENST00000530803 ZBTB1Q9Y2K1 713 aa18.55■□□□□ 0.56
ALKBH3-207ENST00000530803 GIGYF1O75420 1035 aaPredicted RBP18.54■□□□□ 0.56
ALKBH3-207ENST00000530803 A1BGP04217 495 aa18.54■□□□□ 0.56
ALKBH3-207ENST00000530803 GOLGB1Q14789 3259 aaKnown RBP18.54■□□□□ 0.56
ALKBH3-207ENST00000530803 CNTNAP4Q9C0A0 1308 aa18.53■□□□□ 0.56
ALKBH3-207ENST00000530803 SNRPA1P09661 255 aaKnown RBP18.53■□□□□ 0.56
ALKBH3-207ENST00000530803 GNAI1P63096 354 aa18.53■□□□□ 0.56
ALKBH3-207ENST00000530803 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
ALKBH3-207ENST00000530803 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
ALKBH3-207ENST00000530803 HNRNPUQ00839 825 aaKnown RBP eCLIP18.52■□□□□ 0.56
ALKBH3-207ENST00000530803 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
ALKBH3-207ENST00000530803 BABAM1Q9NWV8 329 aa18.52■□□□□ 0.56
ALKBH3-207ENST00000530803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 CALD1Q05682 793 aaKnown RBP18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 WDR63Q8IWG1 891 aa18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 CDCA7LQ96GN5 454 aa18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 CCDC87Q9NVE4 849 aa18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 FANCIQ9NVI1 1328 aa18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 C8orf58Q8NAV2 365 aa18.51■□□□□ 0.55
ALKBH3-207ENST00000530803 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
ALKBH3-207ENST00000530803 TSPYL6Q8N831 410 aa18.5■□□□□ 0.55
ALKBH3-207ENST00000530803 IL16Q14005 1332 aa18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 NBPF26B4DH59 902 aa18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 MSH5O43196 834 aa18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 ZBTB7AO95365 584 aa18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 STARD3NLO95772 234 aa18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 NBPF10Q6P3W6 841 aaKnown RBP18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 NBPF15Q8N660 670 aa18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 ZNF330Q9Y3S2 320 aaPredicted RBP18.49■□□□□ 0.55
ALKBH3-207ENST00000530803 UTRNP46939 3433 aa18.48■□□□□ 0.55
ALKBH3-207ENST00000530803 RPS6KA4O75676 772 aa18.48■□□□□ 0.55
ALKBH3-207ENST00000530803 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
ALKBH3-207ENST00000530803 ANXA1P04083 346 aa18.47■□□□□ 0.55
ALKBH3-207ENST00000530803 DUSP27Q5VZP5 1158 aa18.47■□□□□ 0.55
ALKBH3-207ENST00000530803 ARHGEF1Q92888 912 aaKnown RBP18.47■□□□□ 0.55
ALKBH3-207ENST00000530803 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
ALKBH3-207ENST00000530803 SOS1Q07889 1333 aaPredicted RBP18.47■□□□□ 0.55
ALKBH3-207ENST00000530803 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
ALKBH3-207ENST00000530803 COL15A1P39059 1388 aa18.46■□□□□ 0.55
ALKBH3-207ENST00000530803 SSFA2P28290 1259 aa18.46■□□□□ 0.55
ALKBH3-207ENST00000530803 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
ALKBH3-207ENST00000530803 PROSER3Q2NL68 480 aa18.46■□□□□ 0.55
ALKBH3-207ENST00000530803 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
ALKBH3-207ENST00000530803 SRP68Q9UHB9 627 aaKnown RBP18.46■□□□□ 0.55
ALKBH3-207ENST00000530803 MYL6BP14649 208 aa18.45■□□□□ 0.54
ALKBH3-207ENST00000530803 TRAPPC3LQ5T215 181 aa18.45■□□□□ 0.54
ALKBH3-207ENST00000530803 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
ALKBH3-207ENST00000530803 EIF5P55010 431 aaKnown RBP18.44■□□□□ 0.54
ALKBH3-207ENST00000530803 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
ALKBH3-207ENST00000530803 PDIA6Q15084 440 aa18.44■□□□□ 0.54
ALKBH3-207ENST00000530803 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
ALKBH3-207ENST00000530803 SLFN5Q08AF3 891 aa18.43■□□□□ 0.54
ALKBH3-207ENST00000530803 TBC1D2BQ9UPU7 963 aa18.42■□□□□ 0.54
ALKBH3-207ENST00000530803 COL24A1Q17RW2 1714 aa18.42■□□□□ 0.54
ALKBH3-207ENST00000530803 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
ALKBH3-207ENST00000530803 SCN7AQ01118 1682 aa18.42■□□□□ 0.54
ALKBH3-207ENST00000530803 IL6STP40189 918 aaPredicted RBP18.42■□□□□ 0.54
ALKBH3-207ENST00000530803 HDGFL1Q5TGJ6 251 aa18.42■□□□□ 0.54
ALKBH3-207ENST00000530803 CHPF2Q9P2E5 772 aa18.42■□□□□ 0.54
ALKBH3-207ENST00000530803 RFC4P35249 363 aa18.41■□□□□ 0.54
ALKBH3-207ENST00000530803 TWISTNBQ3B726 338 aaPredicted RBP18.41■□□□□ 0.54
ALKBH3-207ENST00000530803 USPL1Q5W0Q7 1092 aa18.41■□□□□ 0.54
ALKBH3-207ENST00000530803 LRP10Q7Z4F1 713 aa18.41■□□□□ 0.54
ALKBH3-207ENST00000530803 ARXQ96QS3 562 aa18.41■□□□□ 0.54
ALKBH3-207ENST00000530803 MYH16Q9H6N6 1097 aa18.41■□□□□ 0.54
ALKBH3-207ENST00000530803 E9PSI1 815 aa18.4■□□□□ 0.54
ALKBH3-207ENST00000530803 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
ALKBH3-207ENST00000530803 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
ALKBH3-207ENST00000530803 GYS1P13807 737 aa18.39■□□□□ 0.53
ALKBH3-207ENST00000530803 ADRA2BP18089 450 aa18.39■□□□□ 0.53
ALKBH3-207ENST00000530803 YTHDC1Q96MU7 727 aaKnown RBP18.39■□□□□ 0.53
ALKBH3-207ENST00000530803 BCL2L12Q9HB09 334 aa18.39■□□□□ 0.53
ALKBH3-207ENST00000530803 NUP98P52948 1817 aa18.39■□□□□ 0.53
ALKBH3-207ENST00000530803 HOXB7P09629 217 aa18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 HMGB2P26583 209 aaKnown RBP18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 TTLL7Q6ZT98 887 aa18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 VAMP4O75379 141 aa18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 PTGER2P43116 358 aa18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 FKBP8Q14318 412 aa18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 DZIP3Q86Y13 1208 aaKnown RBP18.38■□□□□ 0.53
ALKBH3-207ENST00000530803 SGIP1Q9BQI5 828 aa18.37■□□□□ 0.53
ALKBH3-207ENST00000530803 NARFQ9UHQ1 456 aa18.37■□□□□ 0.53
ALKBH3-207ENST00000530803 AIMP1Q12904 312 aaKnown RBP18.36■□□□□ 0.53
ALKBH3-207ENST00000530803 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
ALKBH3-207ENST00000530803 ZPR1O75312 459 aa18.35■□□□□ 0.53
ALKBH3-207ENST00000530803 CAMTA2O94983 1202 aa18.35■□□□□ 0.53
ALKBH3-207ENST00000530803 HLFQ16534 295 aa18.35■□□□□ 0.53
ALKBH3-207ENST00000530803 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
ALKBH3-207ENST00000530803 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
ALKBH3-207ENST00000530803 LRP5O75197 1615 aa18.35■□□□□ 0.53
ALKBH3-207ENST00000530803 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
ALKBH3-207ENST00000530803 ERBB4Q15303 1308 aa18.34■□□□□ 0.53
ALKBH3-207ENST00000530803 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms