RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 TSR2Q969E8 191 aaKnown RBP32.28■■■□□ 2.76
LTBP3-213ENST00000529371 RTCBQ9Y3I0 505 aaKnown RBP32.27■■■□□ 2.76
LTBP3-213ENST00000529371 PRAMEF22A3QJZ6 481 aa32.26■■■□□ 2.75
LTBP3-213ENST00000529371 FANCIQ9NVI1 1328 aa32.26■■■□□ 2.75
LTBP3-213ENST00000529371 FLAD1Q8NFF5 587 aa32.25■■■□□ 2.75
LTBP3-213ENST00000529371 USP16Q9Y5T5 823 aa32.25■■■□□ 2.75
LTBP3-213ENST00000529371 PHF14O94880 888 aa32.24■■■□□ 2.75
LTBP3-213ENST00000529371 E9PSI1 815 aa32.23■■■□□ 2.75
LTBP3-213ENST00000529371 RPS6KA4O75676 772 aa32.23■■■□□ 2.75
LTBP3-213ENST00000529371 SSFA2P28290 1259 aa32.23■■■□□ 2.75
LTBP3-213ENST00000529371 KRT24Q2M2I5 525 aa32.23■■■□□ 2.75
LTBP3-213ENST00000529371 INTS5Q6P9B9 1019 aaKnown RBP32.23■■■□□ 2.75
LTBP3-213ENST00000529371 QSER1Q2KHR3 1735 aa32.23■■■□□ 2.75
LTBP3-213ENST00000529371 TUBGCP6Q96RT7 1819 aa32.22■■■□□ 2.75
LTBP3-213ENST00000529371 HOXB7P09629 217 aa32.22■■■□□ 2.75
LTBP3-213ENST00000529371 DUSP27Q5VZP5 1158 aa32.22■■■□□ 2.75
LTBP3-213ENST00000529371 NPM2Q86SE8 214 aaKnown RBP32.22■■■□□ 2.75
LTBP3-213ENST00000529371 ZBTB1Q9Y2K1 713 aa32.22■■■□□ 2.75
LTBP3-213ENST00000529371 UBR3Q6ZT12 1888 aa32.22■■■□□ 2.75
LTBP3-213ENST00000529371 MSH5O43196 834 aa32.21■■■□□ 2.75
LTBP3-213ENST00000529371 CANXP27824 592 aaKnown RBP32.21■■■□□ 2.75
LTBP3-213ENST00000529371 MYH14Q7Z406 1995 aaKnown RBP32.21■■■□□ 2.75
LTBP3-213ENST00000529371 PNPLA7Q6ZV29 1317 aa32.21■■■□□ 2.75
LTBP3-213ENST00000529371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.2■■■□□ 2.75
LTBP3-213ENST00000529371 EIF2S2P20042 333 aaKnown RBP32.2■■■□□ 2.75
LTBP3-213ENST00000529371 SPINK5Q9NQ38 1064 aaPredicted RBP32.2■■■□□ 2.75
LTBP3-213ENST00000529371 A1BGP04217 495 aa32.19■■■□□ 2.74
LTBP3-213ENST00000529371 ADRA2BP18089 450 aa32.19■■■□□ 2.74
LTBP3-213ENST00000529371 TRAPPC3LQ5T215 181 aa32.18■■■□□ 2.74
LTBP3-213ENST00000529371 ZNF330Q9Y3S2 320 aaPredicted RBP32.18■■■□□ 2.74
LTBP3-213ENST00000529371 SOS1Q07889 1333 aaPredicted RBP32.18■■■□□ 2.74
LTBP3-213ENST00000529371 ELL2O00472 640 aaPredicted RBP32.17■■■□□ 2.74
LTBP3-213ENST00000529371 CHMP4AQ9BY43 222 aa32.17■■■□□ 2.74
LTBP3-213ENST00000529371 ZBED9Q6R2W3 1325 aa32.17■■■□□ 2.74
LTBP3-213ENST00000529371 HDGFL1Q5TGJ6 251 aa32.16■■■□□ 2.74
LTBP3-213ENST00000529371 C8orf58Q8NAV2 365 aa32.16■■■□□ 2.74
LTBP3-213ENST00000529371 ERBB4Q15303 1308 aa32.16■■■□□ 2.74
LTBP3-213ENST00000529371 IL6STP40189 918 aaPredicted RBP32.15■■■□□ 2.74
LTBP3-213ENST00000529371 SLFN5Q08AF3 891 aa32.15■■■□□ 2.74
LTBP3-213ENST00000529371 COL23A1Q86Y22 540 aaPredicted RBP32.15■■■□□ 2.74
LTBP3-213ENST00000529371 TWISTNBQ3B726 338 aaPredicted RBP32.14■■■□□ 2.74
LTBP3-213ENST00000529371 AMIGO3Q86WK7 504 aa32.14■■■□□ 2.74
LTBP3-213ENST00000529371 NECTIN2Q92692 538 aa32.14■■■□□ 2.74
LTBP3-213ENST00000529371 COL15A1P39059 1388 aa32.14■■■□□ 2.74
LTBP3-213ENST00000529371 A0A087WZG4 1122 aa32.13■■■□□ 2.73
LTBP3-213ENST00000529371 RFC4P35249 363 aa32.13■■■□□ 2.73
LTBP3-213ENST00000529371 PIP4K2AP48426 406 aaPredicted RBP32.13■■■□□ 2.73
LTBP3-213ENST00000529371 EXOSC9Q06265 439 aaKnown RBP32.13■■■□□ 2.73
LTBP3-213ENST00000529371 SMIM5Q71RC9 77 aa32.13■■■□□ 2.73
LTBP3-213ENST00000529371 CDCA7LQ96GN5 454 aa32.13■■■□□ 2.73
LTBP3-213ENST00000529371 CASZ1Q86V15 1759 aa32.12■■■□□ 2.73
LTBP3-213ENST00000529371 TSPYL6Q8N831 410 aa32.11■■■□□ 2.73
LTBP3-213ENST00000529371 EIF5P55010 431 aaKnown RBP32.1■■■□□ 2.73
LTBP3-213ENST00000529371 SLC16A10Q8TF71 515 aa32.1■■■□□ 2.73
LTBP3-213ENST00000529371 ARHGEF1Q92888 912 aaKnown RBP32.1■■■□□ 2.73
LTBP3-213ENST00000529371 ARXQ96QS3 562 aa32.1■■■□□ 2.73
LTBP3-213ENST00000529371 NBPF26B4DH59 902 aa32.09■■■□□ 2.73
LTBP3-213ENST00000529371 MYL6BP14649 208 aa32.09■■■□□ 2.73
LTBP3-213ENST00000529371 NBPF10Q6P3W6 841 aaKnown RBP32.09■■■□□ 2.73
LTBP3-213ENST00000529371 NBPF15Q8N660 670 aa32.09■■■□□ 2.73
LTBP3-213ENST00000529371 PDGFDQ9GZP0 370 aaPredicted RBP32.09■■■□□ 2.73
LTBP3-213ENST00000529371 CCDC30Q5VVM6 783 aa32.08■■■□□ 2.73
LTBP3-213ENST00000529371 C4AP0C0L4 1744 aa32.07■■■□□ 2.72
LTBP3-213ENST00000529371 ZPR1O75312 459 aa32.07■■■□□ 2.72
LTBP3-213ENST00000529371 DBF4Q9UBU7 674 aaPredicted RBP32.06■■■□□ 2.72
LTBP3-213ENST00000529371 ZBTB7AO95365 584 aa32.05■■■□□ 2.72
LTBP3-213ENST00000529371 STK31Q9BXU1 1019 aa32.05■■■□□ 2.72
LTBP3-213ENST00000529371 DDX21Q9NR30 783 aaKnown RBP eCLIP32.05■■■□□ 2.72
LTBP3-213ENST00000529371 CHPF2Q9P2E5 772 aa32.05■■■□□ 2.72
LTBP3-213ENST00000529371 MTFR1LQ9H019 292 aa32.04■■■□□ 2.72
LTBP3-213ENST00000529371 USP42Q9H9J4 1324 aaKnown RBP32.03■■■□□ 2.72
LTBP3-213ENST00000529371 DZIP3Q86Y13 1208 aaKnown RBP32.03■■■□□ 2.72
LTBP3-213ENST00000529371 TRMT2AQ8IZ69 625 aaKnown RBP32.03■■■□□ 2.72
LTBP3-213ENST00000529371 YTHDC1Q96MU7 727 aaKnown RBP32.03■■■□□ 2.72
LTBP3-213ENST00000529371 NARFQ9UHQ1 456 aa32.02■■■□□ 2.72
LTBP3-213ENST00000529371 VAMP4O75379 141 aa32.01■■■□□ 2.71
LTBP3-213ENST00000529371 ANXA1P04083 346 aa32.01■■■□□ 2.71
LTBP3-213ENST00000529371 PDIA6Q15084 440 aa32.01■■■□□ 2.71
LTBP3-213ENST00000529371 KIF6Q6ZMV9 814 aa32.01■■■□□ 2.71
LTBP3-213ENST00000529371 SRP68Q9UHB9 627 aaKnown RBP32.01■■■□□ 2.71
LTBP3-213ENST00000529371 TBC1D2BQ9UPU7 963 aa32.01■■■□□ 2.71
LTBP3-213ENST00000529371 PROSER3Q2NL68 480 aa32■■■□□ 2.71
LTBP3-213ENST00000529371 HYPKQ9NX55 129 aa32■■■□□ 2.71
LTBP3-213ENST00000529371 USPL1Q5W0Q7 1092 aa31.99■■■□□ 2.71
LTBP3-213ENST00000529371 MSL1Q68DK7 614 aa31.99■■■□□ 2.71
LTBP3-213ENST00000529371 SPON1Q9HCB6 807 aa31.99■■■□□ 2.71
LTBP3-213ENST00000529371 ATF5Q9Y2D1 282 aaPredicted RBP31.98■■■□□ 2.71
LTBP3-213ENST00000529371 SCN7AQ01118 1682 aa31.96■■■□□ 2.71
LTBP3-213ENST00000529371 TCERG1O14776 1098 aaKnown RBP31.96■■■□□ 2.71
LTBP3-213ENST00000529371 GYS1P13807 737 aa31.96■■■□□ 2.71
LTBP3-213ENST00000529371 NLGN1Q8N2Q7 840 aa31.96■■■□□ 2.71
LTBP3-213ENST00000529371 ZNF652Q9Y2D9 606 aa31.96■■■□□ 2.71
LTBP3-213ENST00000529371 CT47B1P0C2W7 299 aaPredicted RBP31.95■■■□□ 2.71
LTBP3-213ENST00000529371 POLD1P28340 1107 aa31.95■■■□□ 2.71
LTBP3-213ENST00000529371 AIMP1Q12904 312 aaKnown RBP31.95■■■□□ 2.71
LTBP3-213ENST00000529371 XAGE3Q8WTP9 111 aa31.95■■■□□ 2.71
LTBP3-213ENST00000529371 CAMTA2O94983 1202 aa31.93■■■□□ 2.7
LTBP3-213ENST00000529371 TTLL7Q6ZT98 887 aa31.93■■■□□ 2.7
LTBP3-213ENST00000529371 COPS6Q7L5N1 327 aa31.93■■■□□ 2.7
LTBP3-213ENST00000529371 LRP10Q7Z4F1 713 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms