RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
UBXN1-209ENST00000528907 UBR3Q6ZT12 1888 aa18.66■□□□□ 0.58
UBXN1-209ENST00000528907 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
UBXN1-209ENST00000528907 STARD3NLO95772 234 aa18.65■□□□□ 0.58
UBXN1-209ENST00000528907 CDCA7LQ96GN5 454 aa18.65■□□□□ 0.58
UBXN1-209ENST00000528907 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
UBXN1-209ENST00000528907 USP16Q9Y5T5 823 aa18.65■□□□□ 0.58
UBXN1-209ENST00000528907 ERBB4Q15303 1308 aa18.65■□□□□ 0.58
UBXN1-209ENST00000528907 KCNQ4P56696 695 aa18.64■□□□□ 0.57
UBXN1-209ENST00000528907 DUSP27Q5VZP5 1158 aa18.64■□□□□ 0.57
UBXN1-209ENST00000528907 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
UBXN1-209ENST00000528907 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
UBXN1-209ENST00000528907 NBPF14Q5TI25 921 aa18.63■□□□□ 0.57
UBXN1-209ENST00000528907 C8orf58Q8NAV2 365 aa18.63■□□□□ 0.57
UBXN1-209ENST00000528907 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
UBXN1-209ENST00000528907 SLC15A2Q16348 729 aa18.62■□□□□ 0.57
UBXN1-209ENST00000528907 KRT24Q2M2I5 525 aa18.62■□□□□ 0.57
UBXN1-209ENST00000528907 INTS5Q6P9B9 1019 aaKnown RBP18.62■□□□□ 0.57
UBXN1-209ENST00000528907 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
UBXN1-209ENST00000528907 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
UBXN1-209ENST00000528907 EXOSC9Q06265 439 aaKnown RBP18.61■□□□□ 0.57
UBXN1-209ENST00000528907 TWISTNBQ3B726 338 aaPredicted RBP18.61■□□□□ 0.57
UBXN1-209ENST00000528907 STK32BQ9NY57 414 aa18.61■□□□□ 0.57
UBXN1-209ENST00000528907 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
UBXN1-209ENST00000528907 VAMP4O75379 141 aa18.6■□□□□ 0.57
UBXN1-209ENST00000528907 RPS6KA4O75676 772 aa18.6■□□□□ 0.57
UBXN1-209ENST00000528907 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
UBXN1-209ENST00000528907 TSPYL6Q8N831 410 aa18.6■□□□□ 0.57
UBXN1-209ENST00000528907 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
UBXN1-209ENST00000528907 CACNA1FO60840 1977 aa18.6■□□□□ 0.57
UBXN1-209ENST00000528907 ADRA2BP18089 450 aa18.59■□□□□ 0.57
UBXN1-209ENST00000528907 IL6STP40189 918 aaPredicted RBP18.59■□□□□ 0.57
UBXN1-209ENST00000528907 ZNF428Q96B54 188 aa18.59■□□□□ 0.57
UBXN1-209ENST00000528907 AK7Q96M32 723 aa18.59■□□□□ 0.57
UBXN1-209ENST00000528907 SSFA2P28290 1259 aa18.58■□□□□ 0.56
UBXN1-209ENST00000528907 FLAD1Q8NFF5 587 aa18.58■□□□□ 0.56
UBXN1-209ENST00000528907 SPON1Q9HCB6 807 aa18.58■□□□□ 0.56
UBXN1-209ENST00000528907 PPP1R1BQ9UD71 204 aaPredicted RBP18.58■□□□□ 0.56
UBXN1-209ENST00000528907 ZBTB1Q9Y2K1 713 aa18.58■□□□□ 0.56
UBXN1-209ENST00000528907 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
UBXN1-209ENST00000528907 A1BGP04217 495 aa18.57■□□□□ 0.56
UBXN1-209ENST00000528907 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
UBXN1-209ENST00000528907 PDIA6Q15084 440 aa18.57■□□□□ 0.56
UBXN1-209ENST00000528907 HDGFL1Q5TGJ6 251 aa18.57■□□□□ 0.56
UBXN1-209ENST00000528907 RTCBQ9Y3I0 505 aaKnown RBP18.57■□□□□ 0.56
UBXN1-209ENST00000528907 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
UBXN1-209ENST00000528907 NBPF26B4DH59 902 aa18.56■□□□□ 0.56
UBXN1-209ENST00000528907 GNPATO15228 680 aa18.56■□□□□ 0.56
UBXN1-209ENST00000528907 CCDC30Q5VVM6 783 aa18.56■□□□□ 0.56
UBXN1-209ENST00000528907 NBPF10Q6P3W6 841 aaKnown RBP18.56■□□□□ 0.56
UBXN1-209ENST00000528907 NBPF15Q8N660 670 aa18.56■□□□□ 0.56
UBXN1-209ENST00000528907 DDX21Q9NR30 783 aaKnown RBP eCLIP18.56■□□□□ 0.56
UBXN1-209ENST00000528907 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
UBXN1-209ENST00000528907 EIF2S2P20042 333 aaKnown RBP18.55■□□□□ 0.56
UBXN1-209ENST00000528907 LRP10Q7Z4F1 713 aa18.55■□□□□ 0.56
UBXN1-209ENST00000528907 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
UBXN1-209ENST00000528907 DBF4Q9UBU7 674 aaPredicted RBP18.55■□□□□ 0.56
UBXN1-209ENST00000528907 PNPLA7Q6ZV29 1317 aa18.54■□□□□ 0.56
UBXN1-209ENST00000528907 RGL2O15211 777 aa18.54■□□□□ 0.56
UBXN1-209ENST00000528907 COL24A1Q17RW2 1714 aa18.54■□□□□ 0.56
UBXN1-209ENST00000528907 COL15A1P39059 1388 aa18.54■□□□□ 0.56
UBXN1-209ENST00000528907 BCORQ6W2J9 1755 aa18.53■□□□□ 0.56
UBXN1-209ENST00000528907 A0A087WZG4 1122 aa18.53■□□□□ 0.56
UBXN1-209ENST00000528907 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
UBXN1-209ENST00000528907 TRAPPC3LQ5T215 181 aa18.53■□□□□ 0.56
UBXN1-209ENST00000528907 AMIGO3Q86WK7 504 aa18.53■□□□□ 0.56
UBXN1-209ENST00000528907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
UBXN1-209ENST00000528907 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
UBXN1-209ENST00000528907 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.56
UBXN1-209ENST00000528907 SCN7AQ01118 1682 aa18.52■□□□□ 0.56
UBXN1-209ENST00000528907 ALDH1L2Q3SY69 923 aa18.51■□□□□ 0.55
UBXN1-209ENST00000528907 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-209ENST00000528907 ARHGEF1Q92888 912 aaKnown RBP18.51■□□□□ 0.55
UBXN1-209ENST00000528907 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
UBXN1-209ENST00000528907 SLC16A10Q8TF71 515 aa18.5■□□□□ 0.55
UBXN1-209ENST00000528907 STK31Q9BXU1 1019 aa18.5■□□□□ 0.55
UBXN1-209ENST00000528907 BRPF1P55201 1214 aaPredicted RBP18.49■□□□□ 0.55
UBXN1-209ENST00000528907 PROSER3Q2NL68 480 aa18.49■□□□□ 0.55
UBXN1-209ENST00000528907 NARFQ9UHQ1 456 aa18.49■□□□□ 0.55
UBXN1-209ENST00000528907 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
UBXN1-209ENST00000528907 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
UBXN1-209ENST00000528907 NECTIN2Q92692 538 aa18.48■□□□□ 0.55
UBXN1-209ENST00000528907 ERVV-1B6SEH8 477 aa18.47■□□□□ 0.55
UBXN1-209ENST00000528907 MYL6BP14649 208 aa18.47■□□□□ 0.55
UBXN1-209ENST00000528907 RFC4P35249 363 aa18.47■□□□□ 0.55
UBXN1-209ENST00000528907 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
UBXN1-209ENST00000528907 PHF14O94880 888 aa18.46■□□□□ 0.55
UBXN1-209ENST00000528907 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
UBXN1-209ENST00000528907 DZIP3Q86Y13 1208 aaKnown RBP18.46■□□□□ 0.55
UBXN1-209ENST00000528907 NUP98P52948 1817 aa18.45■□□□□ 0.54
UBXN1-209ENST00000528907 ANXA1P04083 346 aa18.45■□□□□ 0.54
UBXN1-209ENST00000528907 RARSP54136 660 aaKnown RBP18.45■□□□□ 0.54
UBXN1-209ENST00000528907 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
UBXN1-209ENST00000528907 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
UBXN1-209ENST00000528907 COPS6Q7L5N1 327 aa18.45■□□□□ 0.54
UBXN1-209ENST00000528907 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
UBXN1-209ENST00000528907 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
UBXN1-209ENST00000528907 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
UBXN1-209ENST00000528907 ZPR1O75312 459 aa18.44■□□□□ 0.54
UBXN1-209ENST00000528907 CAMTA2O94983 1202 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms