RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
PDZD3-209ENST00000528730 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
PDZD3-209ENST00000528730 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
PDZD3-209ENST00000528730 HEG1Q9ULI3 1381 aa17.24■□□□□ 0.35
PDZD3-209ENST00000528730 CANXP27824 592 aaKnown RBP17.23■□□□□ 0.35
PDZD3-209ENST00000528730 RIPK4P57078 832 aa17.23■□□□□ 0.35
PDZD3-209ENST00000528730 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
PDZD3-209ENST00000528730 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
PDZD3-209ENST00000528730 KCNQ3O43525 872 aa17.22■□□□□ 0.35
PDZD3-209ENST00000528730 ZPR1O75312 459 aa17.22■□□□□ 0.35
PDZD3-209ENST00000528730 CYP19A1P11511 503 aaPredicted RBP17.22■□□□□ 0.35
PDZD3-209ENST00000528730 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
PDZD3-209ENST00000528730 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
PDZD3-209ENST00000528730 TEX13AQ9BXU3 409 aaPredicted RBP17.22■□□□□ 0.35
PDZD3-209ENST00000528730 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
PDZD3-209ENST00000528730 MMP10P09238 476 aa17.21■□□□□ 0.35
PDZD3-209ENST00000528730 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
PDZD3-209ENST00000528730 INTS5Q6P9B9 1019 aaKnown RBP17.21■□□□□ 0.35
PDZD3-209ENST00000528730 NLGN1Q8N2Q7 840 aa17.21■□□□□ 0.35
PDZD3-209ENST00000528730 MIS18AQ9NYP9 233 aa17.21■□□□□ 0.35
PDZD3-209ENST00000528730 ZBTB1Q9Y2K1 713 aa17.21■□□□□ 0.35
PDZD3-209ENST00000528730 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
PDZD3-209ENST00000528730 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
PDZD3-209ENST00000528730 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
PDZD3-209ENST00000528730 COL15A1P39059 1388 aa17.19■□□□□ 0.34
PDZD3-209ENST00000528730 GPR162Q16538 588 aa17.19■□□□□ 0.34
PDZD3-209ENST00000528730 PARP3Q9Y6F1 533 aa17.19■□□□□ 0.34
PDZD3-209ENST00000528730 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
PDZD3-209ENST00000528730 GYS1P13807 737 aa17.18■□□□□ 0.34
PDZD3-209ENST00000528730 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
PDZD3-209ENST00000528730 NLGN2Q8NFZ4 835 aa17.18■□□□□ 0.34
PDZD3-209ENST00000528730 USP42Q9H9J4 1324 aaKnown RBP17.18■□□□□ 0.34
PDZD3-209ENST00000528730 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
PDZD3-209ENST00000528730 USPL1Q5W0Q7 1092 aa17.16■□□□□ 0.34
PDZD3-209ENST00000528730 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
PDZD3-209ENST00000528730 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
PDZD3-209ENST00000528730 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
PDZD3-209ENST00000528730 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
PDZD3-209ENST00000528730 A0A087WZG4 1122 aa17.15■□□□□ 0.34
PDZD3-209ENST00000528730 A1BGP04217 495 aa17.15■□□□□ 0.34
PDZD3-209ENST00000528730 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
PDZD3-209ENST00000528730 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
PDZD3-209ENST00000528730 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
PDZD3-209ENST00000528730 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
PDZD3-209ENST00000528730 FKBP8Q14318 412 aa17.14■□□□□ 0.33
PDZD3-209ENST00000528730 LAMB4A4D0S4 1761 aa17.13■□□□□ 0.33
PDZD3-209ENST00000528730 BICDL1Q6ZP65 573 aa17.13■□□□□ 0.33
PDZD3-209ENST00000528730 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
PDZD3-209ENST00000528730 USP16Q9Y5T5 823 aa17.13■□□□□ 0.33
PDZD3-209ENST00000528730 IL6STP40189 918 aaPredicted RBP17.12■□□□□ 0.33
PDZD3-209ENST00000528730 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
PDZD3-209ENST00000528730 NPHP1O15259 732 aa17.11■□□□□ 0.33
PDZD3-209ENST00000528730 APAF1O14727 1248 aa17.1■□□□□ 0.33
PDZD3-209ENST00000528730 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
PDZD3-209ENST00000528730 DZIP3Q86Y13 1208 aaKnown RBP17.1■□□□□ 0.33
PDZD3-209ENST00000528730 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
PDZD3-209ENST00000528730 YY1P25490 414 aa17.09■□□□□ 0.33
PDZD3-209ENST00000528730 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
PDZD3-209ENST00000528730 SCN7AQ01118 1682 aa17.09■□□□□ 0.33
PDZD3-209ENST00000528730 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.33
PDZD3-209ENST00000528730 DDR1Q08345 913 aa17.08■□□□□ 0.32
PDZD3-209ENST00000528730 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
PDZD3-209ENST00000528730 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
PDZD3-209ENST00000528730 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
PDZD3-209ENST00000528730 NFIXQ14938 502 aa17.07■□□□□ 0.32
PDZD3-209ENST00000528730 C10orf71Q711Q0 1435 aa17.06■□□□□ 0.32
PDZD3-209ENST00000528730 MYL6BP14649 208 aa17.06■□□□□ 0.32
PDZD3-209ENST00000528730 TRIM35Q9UPQ4 493 aa17.06■□□□□ 0.32
PDZD3-209ENST00000528730 ZNF652Q9Y2D9 606 aa17.06■□□□□ 0.32
PDZD3-209ENST00000528730 CHD4Q14839 1912 aa17.06■□□□□ 0.32
PDZD3-209ENST00000528730 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
PDZD3-209ENST00000528730 A0A0G2JLW4 131 aa17.05■□□□□ 0.32
PDZD3-209ENST00000528730 POLRMTO00411 1230 aaKnown RBP17.05■□□□□ 0.32
PDZD3-209ENST00000528730 GRIN3BO60391 1043 aa17.05■□□□□ 0.32
PDZD3-209ENST00000528730 SERPINB2P05120 415 aa17.05■□□□□ 0.32
PDZD3-209ENST00000528730 CALD1Q05682 793 aaKnown RBP17.05■□□□□ 0.32
PDZD3-209ENST00000528730 NECTIN2Q92692 538 aa17.05■□□□□ 0.32
PDZD3-209ENST00000528730 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
PDZD3-209ENST00000528730 KIF13BQ9NQT8 1826 aa17.05■□□□□ 0.32
PDZD3-209ENST00000528730 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
PDZD3-209ENST00000528730 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDZD3-209ENST00000528730 TM4SF1P30408 202 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 TGFB2P61812 414 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 TBC1D9BQ66K14 1250 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
PDZD3-209ENST00000528730 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 BCS1LQ9Y276 419 aa17.04■□□□□ 0.32
PDZD3-209ENST00000528730 CAMTA2O94983 1202 aa17.03■□□□□ 0.32
PDZD3-209ENST00000528730 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
PDZD3-209ENST00000528730 PXDNLA1KZ92 1463 aa17.03■□□□□ 0.32
PDZD3-209ENST00000528730 DPEP1P16444 411 aa17.02■□□□□ 0.32
PDZD3-209ENST00000528730 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
PDZD3-209ENST00000528730 CARMIL3Q8ND23 1372 aa17.02■□□□□ 0.31
PDZD3-209ENST00000528730 FAM177BA6PVY3 158 aa17.01■□□□□ 0.31
PDZD3-209ENST00000528730 CHL1O00533 1208 aa17■□□□□ 0.31
PDZD3-209ENST00000528730 CHRNA5P30532 468 aa17■□□□□ 0.31
PDZD3-209ENST00000528730 GNAI1P63096 354 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms