RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00958-203ENST00000527945 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
LINC00958-203ENST00000527945 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
LINC00958-203ENST00000527945 STARD3NLO95772 234 aa12.16□□□□□ -0.46
LINC00958-203ENST00000527945 CRKLP46109 303 aaKnown RBP12.16□□□□□ -0.46
LINC00958-203ENST00000527945 NLGN1Q8N2Q7 840 aa12.16□□□□□ -0.46
LINC00958-203ENST00000527945 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
LINC00958-203ENST00000527945 CYP19A1P11511 503 aaPredicted RBP12.15□□□□□ -0.46
LINC00958-203ENST00000527945 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.46
LINC00958-203ENST00000527945 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
LINC00958-203ENST00000527945 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
LINC00958-203ENST00000527945 FMNL2Q96PY5 1086 aa12.15□□□□□ -0.46
LINC00958-203ENST00000527945 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 APAF1O14727 1248 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 RFC4P35249 363 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 RIPK4P57078 832 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
LINC00958-203ENST00000527945 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 BABAM1Q9NWV8 329 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
LINC00958-203ENST00000527945 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
LINC00958-203ENST00000527945 PHF14O94880 888 aa12.13□□□□□ -0.47
LINC00958-203ENST00000527945 INTS5Q6P9B9 1019 aaKnown RBP12.13□□□□□ -0.47
LINC00958-203ENST00000527945 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
LINC00958-203ENST00000527945 MIER1Q8N108 512 aa12.13□□□□□ -0.47
LINC00958-203ENST00000527945 ZNF784Q8NCA9 323 aaPredicted RBP12.13□□□□□ -0.47
LINC00958-203ENST00000527945 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
LINC00958-203ENST00000527945 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
LINC00958-203ENST00000527945 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
LINC00958-203ENST00000527945 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
LINC00958-203ENST00000527945 BCORQ6W2J9 1755 aa12.12□□□□□ -0.47
LINC00958-203ENST00000527945 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
LINC00958-203ENST00000527945 A0A087WZG4 1122 aa12.11□□□□□ -0.47
LINC00958-203ENST00000527945 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
LINC00958-203ENST00000527945 GYS1P13807 737 aa12.11□□□□□ -0.47
LINC00958-203ENST00000527945 YBX3P16989 372 aaKnown RBP eCLIP12.11□□□□□ -0.476e-9■□□□□ 9
LINC00958-203ENST00000527945 GPR162Q16538 588 aa12.11□□□□□ -0.47
LINC00958-203ENST00000527945 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
LINC00958-203ENST00000527945 RGL2O15211 777 aa12.1□□□□□ -0.47
LINC00958-203ENST00000527945 TGFB2P61812 414 aa12.1□□□□□ -0.47
LINC00958-203ENST00000527945 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
LINC00958-203ENST00000527945 ZPR1O75312 459 aa12.09□□□□□ -0.47
LINC00958-203ENST00000527945 MMP10P09238 476 aa12.09□□□□□ -0.47
LINC00958-203ENST00000527945 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
LINC00958-203ENST00000527945 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
LINC00958-203ENST00000527945 FAM9BQ8IZU0 186 aa12.09□□□□□ -0.47
LINC00958-203ENST00000527945 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
LINC00958-203ENST00000527945 CCER2I3L3R5 266 aa12.08□□□□□ -0.48
LINC00958-203ENST00000527945 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
LINC00958-203ENST00000527945 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
LINC00958-203ENST00000527945 NPM2Q86SE8 214 aaKnown RBP12.08□□□□□ -0.48
LINC00958-203ENST00000527945 ZBTB1Q9Y2K1 713 aa12.08□□□□□ -0.48
LINC00958-203ENST00000527945 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.48
LINC00958-203ENST00000527945 COL15A1P39059 1388 aa12.07□□□□□ -0.48
LINC00958-203ENST00000527945 ZNF853P0CG23 659 aa12.07□□□□□ -0.48
LINC00958-203ENST00000527945 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
LINC00958-203ENST00000527945 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
LINC00958-203ENST00000527945 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
LINC00958-203ENST00000527945 ADCY9O60503 1353 aa12.06□□□□□ -0.48
LINC00958-203ENST00000527945 CHL1O00533 1208 aa12.06□□□□□ -0.48
LINC00958-203ENST00000527945 TM4SF1P30408 202 aa12.06□□□□□ -0.48
LINC00958-203ENST00000527945 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
LINC00958-203ENST00000527945 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
LINC00958-203ENST00000527945 PARP3Q9Y6F1 533 aa12.06□□□□□ -0.48
LINC00958-203ENST00000527945 AFDNP55196 1824 aaKnown RBP12.06□□□□□ -0.48
LINC00958-203ENST00000527945 A1BGP04217 495 aa12.05□□□□□ -0.48
LINC00958-203ENST00000527945 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
LINC00958-203ENST00000527945 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
LINC00958-203ENST00000527945 PXDNLA1KZ92 1463 aa12.05□□□□□ -0.48
LINC00958-203ENST00000527945 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
LINC00958-203ENST00000527945 ZNF521Q96K83 1311 aa12.05□□□□□ -0.48
LINC00958-203ENST00000527945 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 NRXN2Q9P2S2 1712 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 GIGYF1O75420 1035 aaPredicted RBP12.04□□□□□ -0.48
LINC00958-203ENST00000527945 KCNA3P22001 575 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
LINC00958-203ENST00000527945 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 SPINK5Q9NQ38 1064 aaPredicted RBP12.04□□□□□ -0.48
LINC00958-203ENST00000527945 MBIPQ9NS73 344 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
LINC00958-203ENST00000527945 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
LINC00958-203ENST00000527945 FKBP8Q14318 412 aa12.03□□□□□ -0.48
LINC00958-203ENST00000527945 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
LINC00958-203ENST00000527945 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
LINC00958-203ENST00000527945 NUP98P52948 1817 aa12.02□□□□□ -0.48
LINC00958-203ENST00000527945 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
LINC00958-203ENST00000527945 HOXB7P09629 217 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 DDR1Q08345 913 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 NGEFQ8N5V2 710 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 CHMP4AQ9BY43 222 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
LINC00958-203ENST00000527945 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 272.3 ms