RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
CAPN1-209ENST00000527469 FHDC1Q9C0D6 1143 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-209ENST00000527469 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
CAPN1-209ENST00000527469 CICQ96RK0 1608 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-209ENST00000527469 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
CAPN1-209ENST00000527469 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
CAPN1-209ENST00000527469 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-209ENST00000527469 ZPR1O75312 459 aa17.54■□□□□ 0.4
CAPN1-209ENST00000527469 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
CAPN1-209ENST00000527469 ZBTB1Q9Y2K1 713 aa17.54■□□□□ 0.4
CAPN1-209ENST00000527469 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
CAPN1-209ENST00000527469 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
CAPN1-209ENST00000527469 SOS1Q07889 1333 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-209ENST00000527469 A0A087WZG4 1122 aa17.52■□□□□ 0.4
CAPN1-209ENST00000527469 CCDC184Q52MB2 194 aa17.52■□□□□ 0.4
CAPN1-209ENST00000527469 SYT17Q9BSW7 474 aa17.52■□□□□ 0.4
CAPN1-209ENST00000527469 COL15A1P39059 1388 aa17.52■□□□□ 0.39
CAPN1-209ENST00000527469 APAF1O14727 1248 aa17.51■□□□□ 0.39
CAPN1-209ENST00000527469 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
CAPN1-209ENST00000527469 MMP10P09238 476 aa17.5■□□□□ 0.39
CAPN1-209ENST00000527469 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
CAPN1-209ENST00000527469 USP42Q9H9J4 1324 aaKnown RBP17.49■□□□□ 0.39
CAPN1-209ENST00000527469 GYS1P13807 737 aa17.49■□□□□ 0.39
CAPN1-209ENST00000527469 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
CAPN1-209ENST00000527469 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
CAPN1-209ENST00000527469 COL24A1Q17RW2 1714 aa17.49■□□□□ 0.39
CAPN1-209ENST00000527469 A1BGP04217 495 aa17.48■□□□□ 0.39
CAPN1-209ENST00000527469 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-209ENST00000527469 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
CAPN1-209ENST00000527469 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
CAPN1-209ENST00000527469 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
CAPN1-209ENST00000527469 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
CAPN1-209ENST00000527469 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
CAPN1-209ENST00000527469 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
CAPN1-209ENST00000527469 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
CAPN1-209ENST00000527469 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
CAPN1-209ENST00000527469 KDM3BQ7LBC6 1761 aa17.46■□□□□ 0.39
CAPN1-209ENST00000527469 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
CAPN1-209ENST00000527469 CD2APQ9Y5K6 639 aa17.46■□□□□ 0.39
CAPN1-209ENST00000527469 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-209ENST00000527469 FKBP8Q14318 412 aa17.45■□□□□ 0.38
CAPN1-209ENST00000527469 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
CAPN1-209ENST00000527469 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
CAPN1-209ENST00000527469 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-209ENST00000527469 TBC1D2BQ9UPU7 963 aa17.44■□□□□ 0.38
CAPN1-209ENST00000527469 GPR162Q16538 588 aa17.43■□□□□ 0.38
CAPN1-209ENST00000527469 CHL1O00533 1208 aa17.42■□□□□ 0.38
CAPN1-209ENST00000527469 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
CAPN1-209ENST00000527469 NLGN2Q8NFZ4 835 aa17.42■□□□□ 0.38
CAPN1-209ENST00000527469 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
CAPN1-209ENST00000527469 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
CAPN1-209ENST00000527469 EIF2S2P20042 333 aaKnown RBP17.41■□□□□ 0.38
CAPN1-209ENST00000527469 GNAI1P63096 354 aa17.41■□□□□ 0.38
CAPN1-209ENST00000527469 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
CAPN1-209ENST00000527469 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
CAPN1-209ENST00000527469 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
CAPN1-209ENST00000527469 NPHP1O15259 732 aa17.4■□□□□ 0.38
CAPN1-209ENST00000527469 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
CAPN1-209ENST00000527469 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
CAPN1-209ENST00000527469 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
CAPN1-209ENST00000527469 MYL6BP14649 208 aa17.39■□□□□ 0.37
CAPN1-209ENST00000527469 NFIXQ14938 502 aa17.39■□□□□ 0.37
CAPN1-209ENST00000527469 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
CAPN1-209ENST00000527469 KIF6Q6ZMV9 814 aa17.39■□□□□ 0.37
CAPN1-209ENST00000527469 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
CAPN1-209ENST00000527469 DDR1Q08345 913 aa17.38■□□□□ 0.37
CAPN1-209ENST00000527469 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-209ENST00000527469 ERBB4Q15303 1308 aa17.38■□□□□ 0.37
CAPN1-209ENST00000527469 POLRMTO00411 1230 aaKnown RBP17.37■□□□□ 0.37
CAPN1-209ENST00000527469 CAMTA2O94983 1202 aa17.37■□□□□ 0.37
CAPN1-209ENST00000527469 TM4SF1P30408 202 aa17.37■□□□□ 0.37
CAPN1-209ENST00000527469 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
CAPN1-209ENST00000527469 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
CAPN1-209ENST00000527469 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
CAPN1-209ENST00000527469 BCL2L12Q9HB09 334 aa17.37■□□□□ 0.37
CAPN1-209ENST00000527469 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
CAPN1-209ENST00000527469 SERPINB2P05120 415 aa17.36■□□□□ 0.37
CAPN1-209ENST00000527469 TBC1D9BQ66K14 1250 aa17.36■□□□□ 0.37
CAPN1-209ENST00000527469 C10orf71Q711Q0 1435 aa17.36■□□□□ 0.37
CAPN1-209ENST00000527469 TGFB2P61812 414 aa17.35■□□□□ 0.37
CAPN1-209ENST00000527469 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
CAPN1-209ENST00000527469 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
CAPN1-209ENST00000527469 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
CAPN1-209ENST00000527469 CARMIL3Q8ND23 1372 aa17.35■□□□□ 0.37
CAPN1-209ENST00000527469 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
CAPN1-209ENST00000527469 HOXB7P09629 217 aa17.34■□□□□ 0.37
CAPN1-209ENST00000527469 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
CAPN1-209ENST00000527469 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
CAPN1-209ENST00000527469 DIEXFQ68CQ4 756 aaKnown RBP17.34■□□□□ 0.37
CAPN1-209ENST00000527469 WWC3Q9ULE0 1092 aa17.34■□□□□ 0.37
CAPN1-209ENST00000527469 GRIN3BO60391 1043 aa17.33■□□□□ 0.36
CAPN1-209ENST00000527469 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
CAPN1-209ENST00000527469 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
CAPN1-209ENST00000527469 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.36
CAPN1-209ENST00000527469 A0A0G2JLW4 131 aa17.32■□□□□ 0.36
CAPN1-209ENST00000527469 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
CAPN1-209ENST00000527469 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-209ENST00000527469 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
CAPN1-209ENST00000527469 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
CAPN1-209ENST00000527469 IL16Q14005 1332 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms