RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 SMIM5Q71RC9 77 aa18.9■□□□□ 0.62
NXF1-204ENST00000527064 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
NXF1-204ENST00000527064 C4AP0C0L4 1744 aa18.9■□□□□ 0.62
NXF1-204ENST00000527064 SNRPA1P09661 255 aaKnown RBP18.89■□□□□ 0.61
NXF1-204ENST00000527064 ARHGEF1Q92888 912 aaKnown RBP18.89■□□□□ 0.61
NXF1-204ENST00000527064 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.61
NXF1-204ENST00000527064 SOS1Q07889 1333 aaPredicted RBP18.89■□□□□ 0.61
NXF1-204ENST00000527064 ZBTB1Q9Y2K1 713 aa18.88■□□□□ 0.61
NXF1-204ENST00000527064 COL15A1P39059 1388 aa18.87■□□□□ 0.61
NXF1-204ENST00000527064 MIS18AQ9NYP9 233 aa18.87■□□□□ 0.61
NXF1-204ENST00000527064 TSPYL4Q9UJ04 414 aa18.87■□□□□ 0.61
NXF1-204ENST00000527064 APAF1O14727 1248 aa18.86■□□□□ 0.61
NXF1-204ENST00000527064 TRIM35Q9UPQ4 493 aa18.86■□□□□ 0.61
NXF1-204ENST00000527064 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
NXF1-204ENST00000527064 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
NXF1-204ENST00000527064 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
NXF1-204ENST00000527064 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
NXF1-204ENST00000527064 NLGN1Q8N2Q7 840 aa18.85■□□□□ 0.61
NXF1-204ENST00000527064 FHDC1Q9C0D6 1143 aaPredicted RBP18.85■□□□□ 0.61
NXF1-204ENST00000527064 A0A087WZG4 1122 aa18.84■□□□□ 0.61
NXF1-204ENST00000527064 ZPR1O75312 459 aa18.84■□□□□ 0.61
NXF1-204ENST00000527064 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
NXF1-204ENST00000527064 GYS1P13807 737 aa18.83■□□□□ 0.6
NXF1-204ENST00000527064 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.6
NXF1-204ENST00000527064 EIF4A1P60842 406 aaKnown RBP18.83■□□□□ 0.6
NXF1-204ENST00000527064 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
NXF1-204ENST00000527064 KLHL34Q8N239 644 aa18.82■□□□□ 0.6
NXF1-204ENST00000527064 SYT17Q9BSW7 474 aa18.82■□□□□ 0.6
NXF1-204ENST00000527064 PRAMEF22A3QJZ6 481 aa18.81■□□□□ 0.6
NXF1-204ENST00000527064 SRP68Q9UHB9 627 aaKnown RBP18.81■□□□□ 0.6
NXF1-204ENST00000527064 NARFQ9UHQ1 456 aa18.81■□□□□ 0.6
NXF1-204ENST00000527064 USP16Q9Y5T5 823 aa18.81■□□□□ 0.6
NXF1-204ENST00000527064 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
NXF1-204ENST00000527064 GIGYF1O75420 1035 aaPredicted RBP18.8■□□□□ 0.6
NXF1-204ENST00000527064 A1BGP04217 495 aa18.8■□□□□ 0.6
NXF1-204ENST00000527064 MMP10P09238 476 aa18.8■□□□□ 0.6
NXF1-204ENST00000527064 ZNF330Q9Y3S2 320 aaPredicted RBP18.8■□□□□ 0.6
NXF1-204ENST00000527064 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
NXF1-204ENST00000527064 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
NXF1-204ENST00000527064 SCN7AQ01118 1682 aa18.79■□□□□ 0.6
NXF1-204ENST00000527064 CHL1O00533 1208 aa18.78■□□□□ 0.6
NXF1-204ENST00000527064 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
NXF1-204ENST00000527064 CFAP44Q96MT7 982 aa18.78■□□□□ 0.6
NXF1-204ENST00000527064 CD2APQ9Y5K6 639 aa18.78■□□□□ 0.6
NXF1-204ENST00000527064 PARP3Q9Y6F1 533 aa18.78■□□□□ 0.6
NXF1-204ENST00000527064 FKBP8Q14318 412 aa18.77■□□□□ 0.6
NXF1-204ENST00000527064 CCDC27Q2M243 656 aa18.77■□□□□ 0.6
NXF1-204ENST00000527064 IFT57Q9NWB7 429 aa18.77■□□□□ 0.6
NXF1-204ENST00000527064 ERBB4Q15303 1308 aa18.76■□□□□ 0.59
NXF1-204ENST00000527064 GNAI1P63096 354 aa18.76■□□□□ 0.59
NXF1-204ENST00000527064 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
NXF1-204ENST00000527064 BCORQ6W2J9 1755 aa18.74■□□□□ 0.59
NXF1-204ENST00000527064 DZIP3Q86Y13 1208 aaKnown RBP18.74■□□□□ 0.59
NXF1-204ENST00000527064 NBPF26B4DH59 902 aa18.73■□□□□ 0.59
NXF1-204ENST00000527064 HOXB7P09629 217 aa18.73■□□□□ 0.59
NXF1-204ENST00000527064 ZNF853P0CG23 659 aa18.73■□□□□ 0.59
NXF1-204ENST00000527064 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
NXF1-204ENST00000527064 NBPF10Q6P3W6 841 aaKnown RBP18.73■□□□□ 0.59
NXF1-204ENST00000527064 NBPF15Q8N660 670 aa18.73■□□□□ 0.59
NXF1-204ENST00000527064 TBC1D2BQ9UPU7 963 aa18.73■□□□□ 0.59
NXF1-204ENST00000527064 C10orf71Q711Q0 1435 aa18.73■□□□□ 0.59
NXF1-204ENST00000527064 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
NXF1-204ENST00000527064 NGEFQ8N5V2 710 aa18.72■□□□□ 0.59
NXF1-204ENST00000527064 NLGN2Q8NFZ4 835 aa18.72■□□□□ 0.59
NXF1-204ENST00000527064 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
NXF1-204ENST00000527064 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
NXF1-204ENST00000527064 ZNF652Q9Y2D9 606 aa18.72■□□□□ 0.59
NXF1-204ENST00000527064 POLRMTO00411 1230 aaKnown RBP18.71■□□□□ 0.59
NXF1-204ENST00000527064 RGL2O15211 777 aa18.71■□□□□ 0.59
NXF1-204ENST00000527064 CAMTA2O94983 1202 aa18.71■□□□□ 0.59
NXF1-204ENST00000527064 TM4SF1P30408 202 aa18.71■□□□□ 0.59
NXF1-204ENST00000527064 DDR1Q08345 913 aa18.71■□□□□ 0.59
NXF1-204ENST00000527064 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
NXF1-204ENST00000527064 KIF13BQ9NQT8 1826 aa18.71■□□□□ 0.59
NXF1-204ENST00000527064 EIF2S2P20042 333 aaKnown RBP18.7■□□□□ 0.58
NXF1-204ENST00000527064 NFIXQ14938 502 aa18.7■□□□□ 0.58
NXF1-204ENST00000527064 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
NXF1-204ENST00000527064 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
NXF1-204ENST00000527064 CLEC4GQ6UXB4 293 aa18.69■□□□□ 0.58
NXF1-204ENST00000527064 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
NXF1-204ENST00000527064 IL16Q14005 1332 aa18.69■□□□□ 0.58
NXF1-204ENST00000527064 MYL6BP14649 208 aa18.68■□□□□ 0.58
NXF1-204ENST00000527064 TGFB2P61812 414 aa18.68■□□□□ 0.58
NXF1-204ENST00000527064 NRXN2Q9P2S2 1712 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 GPR162Q16538 588 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 KRT24Q2M2I5 525 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 HDGFL1Q5TGJ6 251 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 TBC1D9BQ66K14 1250 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 BICDL1Q6ZP65 573 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 SETDB2Q96T68 719 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
NXF1-204ENST00000527064 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
NXF1-204ENST00000527064 DUSP27Q5VZP5 1158 aa18.66■□□□□ 0.58
NXF1-204ENST00000527064 WDR63Q8IWG1 891 aa18.66■□□□□ 0.58
NXF1-204ENST00000527064 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
NXF1-204ENST00000527064 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
NXF1-204ENST00000527064 SERPINB2P05120 415 aa18.65■□□□□ 0.58
NXF1-204ENST00000527064 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
NXF1-204ENST00000527064 MAP3K15Q6ZN16 1313 aa18.65■□□□□ 0.58
NXF1-204ENST00000527064 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms