RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 CFHR5Q9BXR6 569 aa7.24□□□□□ -1.25
PCM1-220ENST00000523896 CABP1Q9NZU7 370 aa7.24□□□□□ -1.25
PCM1-220ENST00000523896 A6NJY4 79 aa7.23□□□□□ -1.25
PCM1-220ENST00000523896 ATG7O95352 703 aa7.23□□□□□ -1.25
PCM1-220ENST00000523896 FIGNL1Q6PIW4 674 aa7.23□□□□□ -1.25
PCM1-220ENST00000523896 VRTNQ9H8Y1 702 aa7.23□□□□□ -1.25
PCM1-220ENST00000523896 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
PCM1-220ENST00000523896 CELA2BP08218 269 aaPredicted RBP7.22□□□□□ -1.25
PCM1-220ENST00000523896 ARSJQ5FYB0 599 aaPredicted RBP7.22□□□□□ -1.25
PCM1-220ENST00000523896 NEDD1Q8NHV4 660 aa7.22□□□□□ -1.25
PCM1-220ENST00000523896 WHAMMQ8TF30 809 aa7.22□□□□□ -1.25
PCM1-220ENST00000523896 SCARF2Q96GP6 870 aaPredicted RBP7.22□□□□□ -1.25
PCM1-220ENST00000523896 MKRN1Q9UHC7 482 aaKnown RBP7.22□□□□□ -1.25
PCM1-220ENST00000523896 PCDHGA11Q9Y5H2 935 aa7.22□□□□□ -1.25
PCM1-220ENST00000523896 ACIN1Q9UKV3 1341 aaKnown RBP7.22□□□□□ -1.25
PCM1-220ENST00000523896 TMEM229AB2RXF0 380 aa7.21□□□□□ -1.26
PCM1-220ENST00000523896 CDK2AP1O14519 115 aa7.21□□□□□ -1.26
PCM1-220ENST00000523896 LYPD4Q6UWN0 246 aa7.21□□□□□ -1.26
PCM1-220ENST00000523896 PODNQ7Z5L7 613 aa7.21□□□□□ -1.26
PCM1-220ENST00000523896 SLC4A9Q96Q91 983 aa7.21□□□□□ -1.26
PCM1-220ENST00000523896 ATXN7L1Q9ULK2 861 aaPredicted RBP7.21□□□□□ -1.26
PCM1-220ENST00000523896 CHMP3Q9Y3E7 222 aa7.21□□□□□ -1.26
PCM1-220ENST00000523896 FAM196BA6NMK8 535 aa7.2□□□□□ -1.26
PCM1-220ENST00000523896 BCRP11274 1271 aa7.2□□□□□ -1.26
PCM1-220ENST00000523896 KCNMA1Q12791 1236 aa7.2□□□□□ -1.26
PCM1-220ENST00000523896 ELOAQ14241 798 aaKnown RBP7.2□□□□□ -1.26
PCM1-220ENST00000523896 CDCA8Q53HL2 280 aa7.2□□□□□ -1.26
PCM1-220ENST00000523896 BICDL1Q6ZP65 573 aa7.2□□□□□ -1.26
PCM1-220ENST00000523896 RETREG2Q8NC44 543 aa7.2□□□□□ -1.26
PCM1-220ENST00000523896 CRISPLD1Q9H336 500 aa7.2□□□□□ -1.26
PCM1-220ENST00000523896 ARHGEF15O94989 841 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 BMP4P12644 408 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 MTFR1Q15390 333 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 NLRP8Q86W28 1048 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
PCM1-220ENST00000523896 TPCN2Q8NHX9 752 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 OXCT2Q9BYC2 517 aaPredicted RBP7.19□□□□□ -1.26
PCM1-220ENST00000523896 ZNF358Q9NW07 568 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 ZDHHC3Q9NYG2 299 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 USTQ9Y2C2 406 aa7.19□□□□□ -1.26
PCM1-220ENST00000523896 PHF20L1A8MW92 1017 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L15C9J2P7 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L10C9JJH3 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L13C9JLJ4 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L12C9JPN9 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L11C9JVI0 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L21D6R901 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L18D6R9N7 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L22D6RA61 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L17D6RBQ6 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L19D6RCP7 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L20D6RJB6 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 RASA1P20936 1047 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 FGFR3P22607 806 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 USP17L24Q0WX57 530 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
PCM1-220ENST00000523896 TMEM151AQ8N4L1 468 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 NEUROD4Q9HD90 331 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
PCM1-220ENST00000523896 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
PCM1-220ENST00000523896 ZNF232Q9UNY5 417 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 PCDHGC4Q9Y5F7 938 aa7.18□□□□□ -1.26
PCM1-220ENST00000523896 PDE4CQ08493 712 aa7.17□□□□□ -1.26
PCM1-220ENST00000523896 PTK7Q13308 1070 aa7.17□□□□□ -1.26
PCM1-220ENST00000523896 CCDC102BQ68D86 513 aa7.17□□□□□ -1.26
PCM1-220ENST00000523896 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
PCM1-220ENST00000523896 LARP1Q6PKG0 1096 aaKnown RBP7.17□□□□□ -1.26
PCM1-220ENST00000523896 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
PCM1-220ENST00000523896 ABHD17AQ96GS6 310 aa7.17□□□□□ -1.26
PCM1-220ENST00000523896 LRRC4BQ9NT99 713 aa7.17□□□□□ -1.26
PCM1-220ENST00000523896 A0A1W2PNR3 127 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
PCM1-220ENST00000523896 GDF11O95390 407 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 ATP4AP20648 1035 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 IRS1P35568 1242 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 CLDN10P78369 228 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 RASSF7Q02833 373 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 LARGE2Q8N3Y3 721 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 GOLGA6L1Q8N7Z2 621 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 ACDQ96AP0 544 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 ZCCHC2Q9C0B9 1178 aaKnown RBP7.16□□□□□ -1.26
PCM1-220ENST00000523896 SCHIP1Q9P0W5 487 aaPredicted RBP7.16□□□□□ -1.26
PCM1-220ENST00000523896 ZMIZ1Q9ULJ6 1067 aa7.16□□□□□ -1.26
PCM1-220ENST00000523896 NOVA2Q9UNW9 492 aaKnown RBP7.16□□□□□ -1.26
PCM1-220ENST00000523896 PDIA4P13667 645 aaKnown RBP7.15□□□□□ -1.26
PCM1-220ENST00000523896 SIX5Q8N196 739 aa7.15□□□□□ -1.26
PCM1-220ENST00000523896 BEND7Q8N7W2 519 aaPredicted RBP7.15□□□□□ -1.26
PCM1-220ENST00000523896 TRAIPQ9BWF2 469 aa7.15□□□□□ -1.26
PCM1-220ENST00000523896 IQSEC3Q9UPP2 1182 aaPredicted RBP7.15□□□□□ -1.26
PCM1-220ENST00000523896 PARP3Q9Y6F1 533 aa7.15□□□□□ -1.26
PCM1-220ENST00000523896 SERTM1A2A2V5 107 aa7.14□□□□□ -1.27
PCM1-220ENST00000523896 KHNYNO15037 678 aaKnown RBP7.14□□□□□ -1.27
PCM1-220ENST00000523896 ZBTB7BO15156 539 aaPredicted RBP7.14□□□□□ -1.27
PCM1-220ENST00000523896 OIP5O43482 229 aa7.14□□□□□ -1.27
PCM1-220ENST00000523896 BNIP3LO60238 219 aa7.14□□□□□ -1.27
PCM1-220ENST00000523896 DKK1O94907 266 aa7.14□□□□□ -1.27
PCM1-220ENST00000523896 THBS1P07996 1170 aa7.14□□□□□ -1.27
PCM1-220ENST00000523896 AMPD1P23109 780 aa7.14□□□□□ -1.27
PCM1-220ENST00000523896 PSMA6P60900 246 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms