RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PLA2G4AP47712 749 aa11.15□□□□□ -0.62
CPNE3-206ENST00000523469 PTSQ03393 145 aa11.15□□□□□ -0.62
CPNE3-206ENST00000523469 OCLNQ16625 522 aa11.15□□□□□ -0.62
CPNE3-206ENST00000523469 ZDHHC1Q8WTX9 485 aa11.15□□□□□ -0.62
CPNE3-206ENST00000523469 PRIMPOLQ96LW4 560 aa11.15□□□□□ -0.62
CPNE3-206ENST00000523469 TIMMDC1Q9NPL8 285 aa11.15□□□□□ -0.62
CPNE3-206ENST00000523469 CARNS1A5YM72 827 aa11.14□□□□□ -0.63
CPNE3-206ENST00000523469 NOS2P35228 1153 aa11.14□□□□□ -0.63
CPNE3-206ENST00000523469 POTEAQ6S8J7 498 aa11.14□□□□□ -0.63
CPNE3-206ENST00000523469 CHMP7Q8WUX9 453 aaPredicted RBP11.14□□□□□ -0.63
CPNE3-206ENST00000523469 L3MBTL2Q969R5 705 aa11.14□□□□□ -0.63
CPNE3-206ENST00000523469 SLAIN2Q9P270 581 aa11.14□□□□□ -0.63
CPNE3-206ENST00000523469 FOXO3O43524 673 aa11.13□□□□□ -0.63
CPNE3-206ENST00000523469 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
CPNE3-206ENST00000523469 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
CPNE3-206ENST00000523469 CXXC1Q9P0U4 656 aaPredicted RBP11.13□□□□□ -0.63
CPNE3-206ENST00000523469 ZNF232Q9UNY5 417 aa11.13□□□□□ -0.63
CPNE3-206ENST00000523469 DYRK1BQ9Y463 629 aa11.13□□□□□ -0.63
CPNE3-206ENST00000523469 SENP3-EIF4A1A0A087X0R7 540 aa11.12□□□□□ -0.63
CPNE3-206ENST00000523469 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
CPNE3-206ENST00000523469 EML1O00423 815 aa11.12□□□□□ -0.63
CPNE3-206ENST00000523469 HIRAP54198 1017 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-206ENST00000523469 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
CPNE3-206ENST00000523469 SLC35F4A4IF30 521 aa11.11□□□□□ -0.63
CPNE3-206ENST00000523469 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
CPNE3-206ENST00000523469 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
CPNE3-206ENST00000523469 C1orf216Q8TAB5 229 aa11.1□□□□□ -0.63
CPNE3-206ENST00000523469 AIDAQ96BJ3 306 aa11.1□□□□□ -0.63
CPNE3-206ENST00000523469 SSFA2P28290 1259 aa11.09□□□□□ -0.63
CPNE3-206ENST00000523469 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
CPNE3-206ENST00000523469 CCDC155Q8N6L0 562 aa11.09□□□□□ -0.63
CPNE3-206ENST00000523469 VTI1AQ96AJ9 217 aa11.09□□□□□ -0.63
CPNE3-206ENST00000523469 ZDHHC3Q9NYG2 299 aa11.09□□□□□ -0.63
CPNE3-206ENST00000523469 F11P03951 625 aa11.08□□□□□ -0.64
CPNE3-206ENST00000523469 SH3PXD2AQ5TCZ1 1133 aa11.08□□□□□ -0.64
CPNE3-206ENST00000523469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.64
CPNE3-206ENST00000523469 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
CPNE3-206ENST00000523469 MSX1P28360 303 aa11.07□□□□□ -0.64
CPNE3-206ENST00000523469 C1orf53Q5VUE5 145 aa11.07□□□□□ -0.64
CPNE3-206ENST00000523469 COL26A1Q96A83 441 aa11.07□□□□□ -0.64
CPNE3-206ENST00000523469 GAS2L1Q99501 681 aaPredicted RBP11.07□□□□□ -0.64
CPNE3-206ENST00000523469 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
CPNE3-206ENST00000523469 TXLNAP40222 546 aa11.06□□□□□ -0.64
CPNE3-206ENST00000523469 HOMEZQ8IX15 550 aa11.06□□□□□ -0.64
CPNE3-206ENST00000523469 HCN4Q9Y3Q4 1203 aa11.06□□□□□ -0.64
CPNE3-206ENST00000523469 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
CPNE3-206ENST00000523469 ATP4AP20648 1035 aa11.05□□□□□ -0.64
CPNE3-206ENST00000523469 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
CPNE3-206ENST00000523469 PHACTR1Q9C0D0 580 aa11.05□□□□□ -0.64
CPNE3-206ENST00000523469 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
CPNE3-206ENST00000523469 PPFIA3O75145 1194 aa11.04□□□□□ -0.64
CPNE3-206ENST00000523469 PDIA4P13667 645 aaKnown RBP11.04□□□□□ -0.64
CPNE3-206ENST00000523469 PHLDB3Q6NSJ2 640 aa11.04□□□□□ -0.64
CPNE3-206ENST00000523469 RIPOR1Q6ZS17 1223 aa11.04□□□□□ -0.64
CPNE3-206ENST00000523469 NPAS3Q8IXF0 933 aa11.04□□□□□ -0.64
CPNE3-206ENST00000523469 GPAMQ9HCL2 828 aa11.04□□□□□ -0.64
CPNE3-206ENST00000523469 GPC6Q9Y625 555 aaPredicted RBP11.04□□□□□ -0.64
CPNE3-206ENST00000523469 ITGA6P23229 1130 aa11.03□□□□□ -0.64
CPNE3-206ENST00000523469 PGBD3Q8N328 593 aa11.03□□□□□ -0.64
CPNE3-206ENST00000523469 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
CPNE3-206ENST00000523469 H7C1W4 665 aa11.02□□□□□ -0.65
CPNE3-206ENST00000523469 BRD1O95696 1058 aa11.02□□□□□ -0.65
CPNE3-206ENST00000523469 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.65
CPNE3-206ENST00000523469 GMCL1Q96IK5 515 aa11.02□□□□□ -0.65
CPNE3-206ENST00000523469 MKNK1Q9BUB5 465 aa11.02□□□□□ -0.65
CPNE3-206ENST00000523469 CRISPLD1Q9H336 500 aa11.02□□□□□ -0.65
CPNE3-206ENST00000523469 LBRQ14739 615 aaKnown RBP11.01□□□□□ -0.65
CPNE3-206ENST00000523469 RTN1Q16799 776 aa11.01□□□□□ -0.65
CPNE3-206ENST00000523469 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
CPNE3-206ENST00000523469 TRIM22Q8IYM9 498 aa11.01□□□□□ -0.65
CPNE3-206ENST00000523469 RHPN1Q8TCX5 695 aa11.01□□□□□ -0.65
CPNE3-206ENST00000523469 RUBCNLQ9H714 662 aa11.01□□□□□ -0.65
CPNE3-206ENST00000523469 EFHC2Q5JST6 749 aa11□□□□□ -0.65
CPNE3-206ENST00000523469 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
CPNE3-206ENST00000523469 MYO19Q96H55 970 aa11□□□□□ -0.65
CPNE3-206ENST00000523469 ZIC5Q96T25 663 aa11□□□□□ -0.65
CPNE3-206ENST00000523469 QTRT2Q9H974 415 aaKnown RBP11□□□□□ -0.65
CPNE3-206ENST00000523469 MTMR7Q9Y216 660 aa11□□□□□ -0.65
CPNE3-206ENST00000523469 CAPN12Q6ZSI9 719 aa10.99□□□□□ -0.65
CPNE3-206ENST00000523469 CUEDC1Q9NWM3 386 aaPredicted RBP10.99□□□□□ -0.65
CPNE3-206ENST00000523469 A0A1W2PNR3 127 aa10.98□□□□□ -0.65
CPNE3-206ENST00000523469 HIF1AQ16665 826 aa10.98□□□□□ -0.65
CPNE3-206ENST00000523469 NLRP8Q86W28 1048 aa10.98□□□□□ -0.65
CPNE3-206ENST00000523469 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
CPNE3-206ENST00000523469 H3BM21 787 aa10.97□□□□□ -0.65
CPNE3-206ENST00000523469 TERTO14746 1132 aaKnown RBP10.97□□□□□ -0.65
CPNE3-206ENST00000523469 ARID4AP29374 1257 aaPredicted RBP10.97□□□□□ -0.65
CPNE3-206ENST00000523469 SCNN1AP37088 669 aa10.97□□□□□ -0.65
CPNE3-206ENST00000523469 DBN1Q16643 649 aa10.97□□□□□ -0.65
CPNE3-206ENST00000523469 C16orf46Q6P387 395 aa10.97□□□□□ -0.65
CPNE3-206ENST00000523469 NANOS1Q8WY41 292 aaKnown RBP10.97□□□□□ -0.65
CPNE3-206ENST00000523469 NEUROD4Q9HD90 331 aa10.97□□□□□ -0.65
CPNE3-206ENST00000523469 SEPT3Q9UH03 358 aa10.97□□□□□ -0.65
CPNE3-206ENST00000523469 GJA3Q9Y6H8 435 aa10.97□□□□□ -0.65
CPNE3-206ENST00000523469 VEGFBP49765 207 aa10.96□□□□□ -0.65
CPNE3-206ENST00000523469 NAA30Q147X3 362 aaPredicted RBP10.96□□□□□ -0.65
CPNE3-206ENST00000523469 ZNF837Q96EG3 531 aaPredicted RBP10.96□□□□□ -0.65
CPNE3-206ENST00000523469 ANKIB1Q9P2G1 1089 aa10.96□□□□□ -0.65
CPNE3-206ENST00000523469 THBS1P07996 1170 aa10.95□□□□□ -0.66
CPNE3-206ENST00000523469 COX20Q5RI15 118 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms