RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
SKP1-211ENST00000523359 GDF11O95390 407 aa9.19□□□□□ -0.94
SKP1-211ENST00000523359 CSB-PGBD3P0DP91 1061 aa9.19□□□□□ -0.94
SKP1-211ENST00000523359 PTK7Q13308 1070 aa9.19□□□□□ -0.94
SKP1-211ENST00000523359 DNAAF2Q9NVR5 837 aaKnown RBP9.19□□□□□ -0.94
SKP1-211ENST00000523359 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
SKP1-211ENST00000523359 A0A1B0GTH6 734 aa9.18□□□□□ -0.94
SKP1-211ENST00000523359 THBS1P07996 1170 aa9.18□□□□□ -0.94
SKP1-211ENST00000523359 IRS1P35568 1242 aa9.18□□□□□ -0.94
SKP1-211ENST00000523359 ATP1A2P50993 1020 aa9.18□□□□□ -0.94
SKP1-211ENST00000523359 TLR1Q15399 786 aa9.18□□□□□ -0.94
SKP1-211ENST00000523359 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
SKP1-211ENST00000523359 ZMIZ1Q9ULJ6 1067 aa9.18□□□□□ -0.94
SKP1-211ENST00000523359 NOVA2Q9UNW9 492 aaKnown RBP9.18□□□□□ -0.94
SKP1-211ENST00000523359 PCDHGA11Q9Y5H2 935 aa9.18□□□□□ -0.94
SKP1-211ENST00000523359 CARNS1A5YM72 827 aa9.17□□□□□ -0.94
SKP1-211ENST00000523359 ZBTB7BO15156 539 aaPredicted RBP9.17□□□□□ -0.94
SKP1-211ENST00000523359 MX2P20592 715 aa9.17□□□□□ -0.94
SKP1-211ENST00000523359 ELOAQ14241 798 aaKnown RBP9.17□□□□□ -0.94
SKP1-211ENST00000523359 PDIA4P13667 645 aaKnown RBP9.16□□□□□ -0.94
SKP1-211ENST00000523359 SCNN1DP51172 638 aa9.16□□□□□ -0.94
SKP1-211ENST00000523359 PSME1Q06323 249 aa9.16□□□□□ -0.94
SKP1-211ENST00000523359 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
SKP1-211ENST00000523359 RHBDD1Q8TEB9 315 aa9.16□□□□□ -0.94
SKP1-211ENST00000523359 STK32AQ8WU08 396 aa9.16□□□□□ -0.94
SKP1-211ENST00000523359 ACDQ96AP0 544 aa9.16□□□□□ -0.94
SKP1-211ENST00000523359 RUBCNLQ9H714 662 aa9.16□□□□□ -0.94
SKP1-211ENST00000523359 GDF10P55107 478 aa9.15□□□□□ -0.94
SKP1-211ENST00000523359 DPYDQ12882 1025 aa9.15□□□□□ -0.94
SKP1-211ENST00000523359 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
SKP1-211ENST00000523359 MSX1P28360 303 aa9.14□□□□□ -0.95
SKP1-211ENST00000523359 TMEM164Q5U3C3 297 aa9.14□□□□□ -0.95
SKP1-211ENST00000523359 CCDC102BQ68D86 513 aa9.14□□□□□ -0.95
SKP1-211ENST00000523359 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
SKP1-211ENST00000523359 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
SKP1-211ENST00000523359 ENAMQ9NRM1 1142 aa9.14□□□□□ -0.95
SKP1-211ENST00000523359 USTQ9Y2C2 406 aa9.14□□□□□ -0.95
SKP1-211ENST00000523359 TMEM88BA6NKF7 163 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 DKK1O94907 266 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 INHAP05111 366 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 BCRP11274 1271 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 PLA2G4AP47712 749 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 SIX5Q8N196 739 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 PGBD3Q8N328 593 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 TPCN2Q8NHX9 752 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
SKP1-211ENST00000523359 SFI1A8K8P3 1242 aa9.12□□□□□ -0.95
SKP1-211ENST00000523359 NEDD1Q8NHV4 660 aa9.12□□□□□ -0.95
SKP1-211ENST00000523359 CFHR5Q9BXR6 569 aa9.12□□□□□ -0.95
SKP1-211ENST00000523359 SERTAD1Q9UHV2 236 aa9.12□□□□□ -0.95
SKP1-211ENST00000523359 NSFL1CQ9UNZ2 370 aaKnown RBP9.12□□□□□ -0.95
SKP1-211ENST00000523359 PDE4CQ08493 712 aa9.11□□□□□ -0.95
SKP1-211ENST00000523359 UBAP2LQ14157 1087 aaKnown RBP9.11□□□□□ -0.95
SKP1-211ENST00000523359 EFHC2Q5JST6 749 aa9.11□□□□□ -0.95
SKP1-211ENST00000523359 PHF24Q9UPV7 400 aa9.11□□□□□ -0.95
SKP1-211ENST00000523359 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
SKP1-211ENST00000523359 SEC13P55735 322 aa9.1□□□□□ -0.95
SKP1-211ENST00000523359 LBRQ14739 615 aaKnown RBP9.1□□□□□ -0.95
SKP1-211ENST00000523359 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
SKP1-211ENST00000523359 CNTNAP5Q8WYK1 1306 aa9.09□□□□□ -0.95
SKP1-211ENST00000523359 MAP2K3P46734 347 aa9.09□□□□□ -0.95
SKP1-211ENST00000523359 SMTNP53814 917 aa9.09□□□□□ -0.95
SKP1-211ENST00000523359 KANK3Q6NY19 840 aa9.09□□□□□ -0.95
SKP1-211ENST00000523359 AIDAQ96BJ3 306 aa9.09□□□□□ -0.95
SKP1-211ENST00000523359 ABHD17AQ96GS6 310 aa9.09□□□□□ -0.95
SKP1-211ENST00000523359 OXCT2Q9BYC2 517 aaPredicted RBP9.09□□□□□ -0.95
SKP1-211ENST00000523359 TMEM229AB2RXF0 380 aa9.08□□□□□ -0.96
SKP1-211ENST00000523359 KLRG1Q96E93 195 aa9.08□□□□□ -0.96
SKP1-211ENST00000523359 DNMT3AQ9Y6K1 912 aaPredicted RBP9.08□□□□□ -0.96
SKP1-211ENST00000523359 OIP5O43482 229 aa9.07□□□□□ -0.96
SKP1-211ENST00000523359 FAM69CQ0P6D2 419 aa9.07□□□□□ -0.96
SKP1-211ENST00000523359 NIFKQ9BYG3 293 aaKnown RBP9.07□□□□□ -0.96
SKP1-211ENST00000523359 CRISPLD1Q9H336 500 aa9.07□□□□□ -0.96
SKP1-211ENST00000523359 ZNF358Q9NW07 568 aa9.07□□□□□ -0.96
SKP1-211ENST00000523359 ATXN7L1Q9ULK2 861 aaPredicted RBP9.07□□□□□ -0.96
SKP1-211ENST00000523359 BNIP3LO60238 219 aa9.06□□□□□ -0.96
SKP1-211ENST00000523359 LGR5O75473 907 aa9.06□□□□□ -0.96
SKP1-211ENST00000523359 ATP4AP20648 1035 aa9.06□□□□□ -0.96
SKP1-211ENST00000523359 GPAT2Q6NUI2 795 aa9.06□□□□□ -0.96
SKP1-211ENST00000523359 PODNQ7Z5L7 613 aa9.06□□□□□ -0.96
SKP1-211ENST00000523359 USP3Q9Y6I4 520 aa9.06□□□□□ -0.96
SKP1-211ENST00000523359 PHF20L1A8MW92 1017 aa9.05□□□□□ -0.96
SKP1-211ENST00000523359 C2CD2LO14523 706 aa9.05□□□□□ -0.96
SKP1-211ENST00000523359 BMP4P12644 408 aa9.05□□□□□ -0.96
SKP1-211ENST00000523359 SWI5Q1ZZU3 235 aa9.05□□□□□ -0.96
SKP1-211ENST00000523359 TSEN2Q8NCE0 465 aaKnown RBP9.05□□□□□ -0.96
SKP1-211ENST00000523359 SLAIN2Q9P270 581 aa9.05□□□□□ -0.96
SKP1-211ENST00000523359 A6NJY4 79 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 FGFR3P22607 806 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 CTBSQ01459 385 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 C1orf229Q6ZS94 237 aaPredicted RBP9.04□□□□□ -0.96
SKP1-211ENST00000523359 BEND7Q8N7W2 519 aaPredicted RBP9.04□□□□□ -0.96
SKP1-211ENST00000523359 GALNT6Q8NCL4 622 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 CLP1Q92989 425 aaKnown RBP9.04□□□□□ -0.96
SKP1-211ENST00000523359 SLC4A9Q96Q91 983 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 LRRC4BQ9NT99 713 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 NDFIP2Q9NV92 336 aa9.04□□□□□ -0.96
SKP1-211ENST00000523359 SHISA8B8ZZ34 492 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms