RNA–Protein interactions for RNA: ENST00000522883.1

CDK16-218, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-218ENST00000522883 PNPLA7Q6ZV29 1317 aa18.23■□□□□ 0.51
CDK16-218ENST00000522883 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
CDK16-218ENST00000522883 MSH5O43196 834 aa18.21■□□□□ 0.51
CDK16-218ENST00000522883 PHF14O94880 888 aa18.21■□□□□ 0.51
CDK16-218ENST00000522883 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
CDK16-218ENST00000522883 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
CDK16-218ENST00000522883 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
CDK16-218ENST00000522883 ZBTB7AO95365 584 aa18.2■□□□□ 0.5
CDK16-218ENST00000522883 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
CDK16-218ENST00000522883 GNPATO15228 680 aa18.19■□□□□ 0.5
CDK16-218ENST00000522883 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
CDK16-218ENST00000522883 COL23A1Q86Y22 540 aaPredicted RBP18.18■□□□□ 0.5
CDK16-218ENST00000522883 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
CDK16-218ENST00000522883 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
CDK16-218ENST00000522883 LRP5O75197 1615 aa18.17■□□□□ 0.5
CDK16-218ENST00000522883 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
CDK16-218ENST00000522883 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
CDK16-218ENST00000522883 FMNL2Q96PY5 1086 aa18.17■□□□□ 0.5
CDK16-218ENST00000522883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
CDK16-218ENST00000522883 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
CDK16-218ENST00000522883 CNTNAP4Q9C0A0 1308 aa18.16■□□□□ 0.5
CDK16-218ENST00000522883 PRAMEF22A3QJZ6 481 aa18.15■□□□□ 0.5
CDK16-218ENST00000522883 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
CDK16-218ENST00000522883 RC3H1Q5TC82 1133 aaKnown RBP18.15■□□□□ 0.5
CDK16-218ENST00000522883 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
CDK16-218ENST00000522883 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
CDK16-218ENST00000522883 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
CDK16-218ENST00000522883 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
CDK16-218ENST00000522883 CACNA1FO60840 1977 aa18.14■□□□□ 0.49
CDK16-218ENST00000522883 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.49
CDK16-218ENST00000522883 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
CDK16-218ENST00000522883 SPON1Q9HCB6 807 aa18.14■□□□□ 0.49
CDK16-218ENST00000522883 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
CDK16-218ENST00000522883 SSFA2P28290 1259 aa18.13■□□□□ 0.49
CDK16-218ENST00000522883 MSL1Q68DK7 614 aa18.13■□□□□ 0.49
CDK16-218ENST00000522883 C8orf58Q8NAV2 365 aa18.13■□□□□ 0.49
CDK16-218ENST00000522883 FLAD1Q8NFF5 587 aa18.13■□□□□ 0.49
CDK16-218ENST00000522883 MTFR1LQ9H019 292 aa18.13■□□□□ 0.49
CDK16-218ENST00000522883 CCDC87Q9NVE4 849 aa18.13■□□□□ 0.49
CDK16-218ENST00000522883 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
CDK16-218ENST00000522883 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
CDK16-218ENST00000522883 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
CDK16-218ENST00000522883 ZBTB1Q9Y2K1 713 aa18.12■□□□□ 0.49
CDK16-218ENST00000522883 STARD3NLO95772 234 aa18.11■□□□□ 0.49
CDK16-218ENST00000522883 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
CDK16-218ENST00000522883 TRAPPC3LQ5T215 181 aa18.11■□□□□ 0.49
CDK16-218ENST00000522883 CHMP4AQ9BY43 222 aa18.11■□□□□ 0.49
CDK16-218ENST00000522883 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
CDK16-218ENST00000522883 COL24A1Q17RW2 1714 aa18.1■□□□□ 0.49
CDK16-218ENST00000522883 ELL2O00472 640 aaPredicted RBP18.1■□□□□ 0.49
CDK16-218ENST00000522883 VAMP4O75379 141 aa18.1■□□□□ 0.49
CDK16-218ENST00000522883 HOXB7P09629 217 aa18.1■□□□□ 0.49
CDK16-218ENST00000522883 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
CDK16-218ENST00000522883 TSPYL6Q8N831 410 aa18.1■□□□□ 0.49
CDK16-218ENST00000522883 SLC16A10Q8TF71 515 aa18.1■□□□□ 0.49
CDK16-218ENST00000522883 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
CDK16-218ENST00000522883 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
CDK16-218ENST00000522883 PTGER2P43116 358 aa18.09■□□□□ 0.49
CDK16-218ENST00000522883 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
CDK16-218ENST00000522883 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
CDK16-218ENST00000522883 ZNF330Q9Y3S2 320 aaPredicted RBP18.09■□□□□ 0.49
CDK16-218ENST00000522883 A1BGP04217 495 aa18.08■□□□□ 0.48
CDK16-218ENST00000522883 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.48
CDK16-218ENST00000522883 ALDH1L2Q3SY69 923 aa18.08■□□□□ 0.48
CDK16-218ENST00000522883 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.48
CDK16-218ENST00000522883 RFC4P35249 363 aa18.07■□□□□ 0.48
CDK16-218ENST00000522883 SRP68Q9UHB9 627 aaKnown RBP18.07■□□□□ 0.48
CDK16-218ENST00000522883 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
CDK16-218ENST00000522883 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
CDK16-218ENST00000522883 ADRA2BP18089 450 aa18.06■□□□□ 0.48
CDK16-218ENST00000522883 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.06■□□□□ 0.48
CDK16-218ENST00000522883 SGIP1Q9BQI5 828 aa18.06■□□□□ 0.48
CDK16-218ENST00000522883 COL15A1P39059 1388 aa18.05■□□□□ 0.48
CDK16-218ENST00000522883 CCDC30Q5VVM6 783 aa18.05■□□□□ 0.48
CDK16-218ENST00000522883 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
CDK16-218ENST00000522883 POLD1P28340 1107 aa18.04■□□□□ 0.48
CDK16-218ENST00000522883 EIF5P55010 431 aaKnown RBP18.03■□□□□ 0.48
CDK16-218ENST00000522883 HDGFL1Q5TGJ6 251 aa18.03■□□□□ 0.48
CDK16-218ENST00000522883 SSH1Q8WYL5 1049 aa18.03■□□□□ 0.48
CDK16-218ENST00000522883 ARXQ96QS3 562 aa18.03■□□□□ 0.48
CDK16-218ENST00000522883 STK31Q9BXU1 1019 aa18.03■□□□□ 0.48
CDK16-218ENST00000522883 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 KIF16BQ96L93 1317 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
CDK16-218ENST00000522883 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 ZPR1O75312 459 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 BCAR3O75815 825 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 GYS1P13807 737 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.48
CDK16-218ENST00000522883 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
CDK16-218ENST00000522883 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 NECTIN2Q92692 538 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.48
CDK16-218ENST00000522883 IL6STP40189 918 aaPredicted RBP18.01■□□□□ 0.47
CDK16-218ENST00000522883 BRPF1P55201 1214 aaPredicted RBP18.01■□□□□ 0.47
CDK16-218ENST00000522883 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
CDK16-218ENST00000522883 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
CDK16-218ENST00000522883 NEFLP07196 543 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms