RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 ATG3Q9NT62 314 aa18.21■□□□□ 0.51
EXTL3-211ENST00000522698 TUBGCP6Q96RT7 1819 aa18.21■□□□□ 0.51
EXTL3-211ENST00000522698 TJP1Q07157 1748 aa18.2■□□□□ 0.5
EXTL3-211ENST00000522698 POLD1P28340 1107 aa18.2■□□□□ 0.5
EXTL3-211ENST00000522698 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
EXTL3-211ENST00000522698 ASAP1Q9ULH1 1129 aa18.2■□□□□ 0.5
EXTL3-211ENST00000522698 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
EXTL3-211ENST00000522698 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
EXTL3-211ENST00000522698 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
EXTL3-211ENST00000522698 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
EXTL3-211ENST00000522698 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
EXTL3-211ENST00000522698 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
EXTL3-211ENST00000522698 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
EXTL3-211ENST00000522698 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
EXTL3-211ENST00000522698 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
EXTL3-211ENST00000522698 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
EXTL3-211ENST00000522698 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
EXTL3-211ENST00000522698 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
EXTL3-211ENST00000522698 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
EXTL3-211ENST00000522698 SMARCC1Q92922 1105 aaPredicted RBP18.16■□□□□ 0.5
EXTL3-211ENST00000522698 GOLGB1Q14789 3259 aaKnown RBP18.16■□□□□ 0.5
EXTL3-211ENST00000522698 TSPYL6Q8N831 410 aa18.15■□□□□ 0.5
EXTL3-211ENST00000522698 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
EXTL3-211ENST00000522698 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
EXTL3-211ENST00000522698 HOXB7P09629 217 aa18.14■□□□□ 0.49
EXTL3-211ENST00000522698 NLGN2Q8NFZ4 835 aa18.14■□□□□ 0.49
EXTL3-211ENST00000522698 CT47B1P0C2W7 299 aaPredicted RBP18.13■□□□□ 0.49
EXTL3-211ENST00000522698 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
EXTL3-211ENST00000522698 SLC4A9Q96Q91 983 aa18.13■□□□□ 0.49
EXTL3-211ENST00000522698 MSH5O43196 834 aa18.12■□□□□ 0.49
EXTL3-211ENST00000522698 PTCD1O75127 700 aaKnown RBP18.12■□□□□ 0.49
EXTL3-211ENST00000522698 VAMP4O75379 141 aa18.12■□□□□ 0.49
EXTL3-211ENST00000522698 TWISTNBQ3B726 338 aaPredicted RBP18.12■□□□□ 0.49
EXTL3-211ENST00000522698 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
EXTL3-211ENST00000522698 LOC102724428A0A0B4J2F2 783 aa18.11■□□□□ 0.49
EXTL3-211ENST00000522698 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
EXTL3-211ENST00000522698 SIK1P57059 783 aa18.11■□□□□ 0.49
EXTL3-211ENST00000522698 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
EXTL3-211ENST00000522698 ELL2O00472 640 aaPredicted RBP18.1■□□□□ 0.49
EXTL3-211ENST00000522698 MSL1Q68DK7 614 aa18.1■□□□□ 0.49
EXTL3-211ENST00000522698 COL23A1Q86Y22 540 aaPredicted RBP18.1■□□□□ 0.49
EXTL3-211ENST00000522698 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
EXTL3-211ENST00000522698 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
EXTL3-211ENST00000522698 GRIN3BO60391 1043 aa18.08■□□□□ 0.48
EXTL3-211ENST00000522698 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
EXTL3-211ENST00000522698 USP16Q9Y5T5 823 aa18.07■□□□□ 0.48
EXTL3-211ENST00000522698 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
EXTL3-211ENST00000522698 YBX3P16989 372 aaKnown RBP eCLIP18.06■□□□□ 0.48
EXTL3-211ENST00000522698 ITPK1Q13572 414 aa18.06■□□□□ 0.48
EXTL3-211ENST00000522698 TEX13AQ9BXU3 409 aaPredicted RBP18.06■□□□□ 0.48
EXTL3-211ENST00000522698 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
EXTL3-211ENST00000522698 RARSP54136 660 aaKnown RBP18.05■□□□□ 0.48
EXTL3-211ENST00000522698 HDGFL1Q5TGJ6 251 aa18.05■□□□□ 0.48
EXTL3-211ENST00000522698 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
EXTL3-211ENST00000522698 CYP19A1P11511 503 aaPredicted RBP18.04■□□□□ 0.48
EXTL3-211ENST00000522698 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
EXTL3-211ENST00000522698 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
EXTL3-211ENST00000522698 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
EXTL3-211ENST00000522698 CHMP4AQ9BY43 222 aa18.04■□□□□ 0.48
EXTL3-211ENST00000522698 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
EXTL3-211ENST00000522698 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
EXTL3-211ENST00000522698 ERBB4Q15303 1308 aa18.03■□□□□ 0.48
EXTL3-211ENST00000522698 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
EXTL3-211ENST00000522698 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
EXTL3-211ENST00000522698 SSH1Q8WYL5 1049 aa18.03■□□□□ 0.48
EXTL3-211ENST00000522698 CEP350Q5VT06 3117 aa18.03■□□□□ 0.48
EXTL3-211ENST00000522698 STARD3NLO95772 234 aa18.02■□□□□ 0.48
EXTL3-211ENST00000522698 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
EXTL3-211ENST00000522698 BRPF1P55201 1214 aaPredicted RBP18.01■□□□□ 0.47
EXTL3-211ENST00000522698 PDIA6Q15084 440 aa18.01■□□□□ 0.47
EXTL3-211ENST00000522698 AMIGO3Q86WK7 504 aa18.01■□□□□ 0.47
EXTL3-211ENST00000522698 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
EXTL3-211ENST00000522698 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
EXTL3-211ENST00000522698 CNTNAP4Q9C0A0 1308 aa18■□□□□ 0.47
EXTL3-211ENST00000522698 SMIM5Q71RC9 77 aa18■□□□□ 0.47
EXTL3-211ENST00000522698 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
EXTL3-211ENST00000522698 MRPL50Q8N5N7 158 aaKnown RBP18■□□□□ 0.47
EXTL3-211ENST00000522698 DDX21Q9NR30 783 aaKnown RBP eCLIP18■□□□□ 0.47
EXTL3-211ENST00000522698 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
EXTL3-211ENST00000522698 ATP10DQ9P241 1426 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 NBPF26B4DH59 902 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
EXTL3-211ENST00000522698 PHF14O94880 888 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 A1BGP04217 495 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 PROSER3Q2NL68 480 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 NBPF10Q6P3W6 841 aaKnown RBP17.99■□□□□ 0.47
EXTL3-211ENST00000522698 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
EXTL3-211ENST00000522698 NBPF15Q8N660 670 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 AK7Q96M32 723 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 SMC4Q9NTJ3 1288 aa17.99■□□□□ 0.47
EXTL3-211ENST00000522698 BCAR3O75815 825 aa17.98■□□□□ 0.47
EXTL3-211ENST00000522698 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
EXTL3-211ENST00000522698 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
EXTL3-211ENST00000522698 FLAD1Q8NFF5 587 aa17.98■□□□□ 0.47
EXTL3-211ENST00000522698 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
EXTL3-211ENST00000522698 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
EXTL3-211ENST00000522698 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
EXTL3-211ENST00000522698 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms