RNA–Protein interactions for RNA: ENST00000522519.5

MSC-AS1-208, MSC antisense RNA 1, humanhuman

TSL 2 BASIC

Gene MSC-AS1, Length 1,537 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-208ENST00000522519 GTF3C3Q9Y5Q9 886 aa20.4■□□□□ 0.86
MSC-AS1-208ENST00000522519 BCORQ6W2J9 1755 aa20.39■□□□□ 0.86
MSC-AS1-208ENST00000522519 IL16Q14005 1332 aa20.39■□□□□ 0.86
MSC-AS1-208ENST00000522519 PNPLA7Q6ZV29 1317 aa20.39■□□□□ 0.86
MSC-AS1-208ENST00000522519 ZNF521Q96K83 1311 aa20.39■□□□□ 0.86
MSC-AS1-208ENST00000522519 PRAMEF22A3QJZ6 481 aa20.39■□□□□ 0.85
MSC-AS1-208ENST00000522519 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.85
MSC-AS1-208ENST00000522519 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
MSC-AS1-208ENST00000522519 GNPATO15228 680 aa20.38■□□□□ 0.85
MSC-AS1-208ENST00000522519 AMIGO3Q86WK7 504 aa20.38■□□□□ 0.85
MSC-AS1-208ENST00000522519 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
MSC-AS1-208ENST00000522519 SCN7AQ01118 1682 aa20.38■□□□□ 0.85
MSC-AS1-208ENST00000522519 GIGYF1O75420 1035 aaPredicted RBP20.37■□□□□ 0.85
MSC-AS1-208ENST00000522519 STARD3NLO95772 234 aa20.37■□□□□ 0.85
MSC-AS1-208ENST00000522519 INTS5Q6P9B9 1019 aaKnown RBP20.37■□□□□ 0.85
MSC-AS1-208ENST00000522519 CCDC87Q9NVE4 849 aa20.37■□□□□ 0.85
MSC-AS1-208ENST00000522519 USP16Q9Y5T5 823 aa20.37■□□□□ 0.85
MSC-AS1-208ENST00000522519 LRP5O75197 1615 aa20.36■□□□□ 0.85
MSC-AS1-208ENST00000522519 PDGFDQ9GZP0 370 aaPredicted RBP20.36■□□□□ 0.85
MSC-AS1-208ENST00000522519 ZBTB1Q9Y2K1 713 aa20.36■□□□□ 0.85
MSC-AS1-208ENST00000522519 RPS6KA4O75676 772 aa20.35■□□□□ 0.85
MSC-AS1-208ENST00000522519 SSFA2P28290 1259 aa20.35■□□□□ 0.85
MSC-AS1-208ENST00000522519 NUP98P52948 1817 aa20.34■□□□□ 0.85
MSC-AS1-208ENST00000522519 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
MSC-AS1-208ENST00000522519 RTCBQ9Y3I0 505 aaKnown RBP20.34■□□□□ 0.85
MSC-AS1-208ENST00000522519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.33■□□□□ 0.85
MSC-AS1-208ENST00000522519 PHF14O94880 888 aa20.33■□□□□ 0.85
MSC-AS1-208ENST00000522519 SMIM5Q71RC9 77 aa20.33■□□□□ 0.85
MSC-AS1-208ENST00000522519 COL23A1Q86Y22 540 aaPredicted RBP20.33■□□□□ 0.85
MSC-AS1-208ENST00000522519 FLAD1Q8NFF5 587 aa20.33■□□□□ 0.85
MSC-AS1-208ENST00000522519 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
MSC-AS1-208ENST00000522519 SOS1Q07889 1333 aaPredicted RBP20.33■□□□□ 0.85
MSC-AS1-208ENST00000522519 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
MSC-AS1-208ENST00000522519 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
MSC-AS1-208ENST00000522519 COL15A1P39059 1388 aa20.32■□□□□ 0.84
MSC-AS1-208ENST00000522519 ADRA2BP18089 450 aa20.32■□□□□ 0.84
MSC-AS1-208ENST00000522519 A1BGP04217 495 aa20.31■□□□□ 0.84
MSC-AS1-208ENST00000522519 HOXB7P09629 217 aa20.31■□□□□ 0.84
MSC-AS1-208ENST00000522519 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
MSC-AS1-208ENST00000522519 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
MSC-AS1-208ENST00000522519 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
MSC-AS1-208ENST00000522519 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
MSC-AS1-208ENST00000522519 IL6STP40189 918 aaPredicted RBP20.28■□□□□ 0.84
MSC-AS1-208ENST00000522519 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
MSC-AS1-208ENST00000522519 DUSP27Q5VZP5 1158 aa20.28■□□□□ 0.84
MSC-AS1-208ENST00000522519 SLC16A10Q8TF71 515 aa20.28■□□□□ 0.84
MSC-AS1-208ENST00000522519 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
MSC-AS1-208ENST00000522519 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
MSC-AS1-208ENST00000522519 AFDNP55196 1824 aaKnown RBP20.28■□□□□ 0.84
MSC-AS1-208ENST00000522519 NBPF26B4DH59 902 aa20.27■□□□□ 0.84
MSC-AS1-208ENST00000522519 MSH5O43196 834 aa20.27■□□□□ 0.84
MSC-AS1-208ENST00000522519 PIP4K2AP48426 406 aaPredicted RBP20.27■□□□□ 0.84
MSC-AS1-208ENST00000522519 NBPF10Q6P3W6 841 aaKnown RBP20.27■□□□□ 0.84
MSC-AS1-208ENST00000522519 NBPF15Q8N660 670 aa20.27■□□□□ 0.84
MSC-AS1-208ENST00000522519 C8orf58Q8NAV2 365 aa20.27■□□□□ 0.84
MSC-AS1-208ENST00000522519 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
MSC-AS1-208ENST00000522519 ZBTB7AO95365 584 aa20.27■□□□□ 0.83
MSC-AS1-208ENST00000522519 EIF2S2P20042 333 aaKnown RBP20.26■□□□□ 0.83
MSC-AS1-208ENST00000522519 MTFR1LQ9H019 292 aa20.26■□□□□ 0.83
MSC-AS1-208ENST00000522519 ARFGEF2Q9Y6D5 1785 aa20.26■□□□□ 0.83
MSC-AS1-208ENST00000522519 USP42Q9H9J4 1324 aaKnown RBP20.25■□□□□ 0.83
MSC-AS1-208ENST00000522519 RFC4P35249 363 aa20.25■□□□□ 0.83
MSC-AS1-208ENST00000522519 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
MSC-AS1-208ENST00000522519 E9PSI1 815 aa20.24■□□□□ 0.83
MSC-AS1-208ENST00000522519 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
MSC-AS1-208ENST00000522519 HDGFL1Q5TGJ6 251 aa20.24■□□□□ 0.83
MSC-AS1-208ENST00000522519 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
MSC-AS1-208ENST00000522519 SLFN5Q08AF3 891 aa20.23■□□□□ 0.83
MSC-AS1-208ENST00000522519 A0A087WZG4 1122 aa20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 PDIA6Q15084 440 aa20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 NECTIN2Q92692 538 aa20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 NARFQ9UHQ1 456 aa20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 KIF13BQ9NQT8 1826 aa20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 SPON1Q9HCB6 807 aa20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 SRP68Q9UHB9 627 aaKnown RBP20.22■□□□□ 0.83
MSC-AS1-208ENST00000522519 NRXN2Q9P2S2 1712 aa20.21■□□□□ 0.83
MSC-AS1-208ENST00000522519 GYS1P13807 737 aa20.21■□□□□ 0.83
MSC-AS1-208ENST00000522519 MYL6BP14649 208 aa20.21■□□□□ 0.83
MSC-AS1-208ENST00000522519 PROSER3Q2NL68 480 aa20.21■□□□□ 0.83
MSC-AS1-208ENST00000522519 LRP10Q7Z4F1 713 aa20.21■□□□□ 0.83
MSC-AS1-208ENST00000522519 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
MSC-AS1-208ENST00000522519 ATF5Q9Y2D1 282 aaPredicted RBP20.21■□□□□ 0.83
MSC-AS1-208ENST00000522519 ZPR1O75312 459 aa20.2■□□□□ 0.82
MSC-AS1-208ENST00000522519 ANXA1P04083 346 aa20.2■□□□□ 0.82
MSC-AS1-208ENST00000522519 MSL1Q68DK7 614 aa20.2■□□□□ 0.82
MSC-AS1-208ENST00000522519 TRMT2AQ8IZ69 625 aaKnown RBP20.2■□□□□ 0.82
MSC-AS1-208ENST00000522519 SGIP1Q9BQI5 828 aa20.2■□□□□ 0.82
MSC-AS1-208ENST00000522519 DDX21Q9NR30 783 aaKnown RBP eCLIP20.2■□□□□ 0.82
MSC-AS1-208ENST00000522519 SRCAPQ6ZRS2 3230 aa20.2■□□□□ 0.82
MSC-AS1-208ENST00000522519 PTGER2P43116 358 aa20.19■□□□□ 0.82
MSC-AS1-208ENST00000522519 USPL1Q5W0Q7 1092 aa20.19■□□□□ 0.82
MSC-AS1-208ENST00000522519 DZIP3Q86Y13 1208 aaKnown RBP20.19■□□□□ 0.82
MSC-AS1-208ENST00000522519 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
MSC-AS1-208ENST00000522519 DBF4Q9UBU7 674 aaPredicted RBP20.18■□□□□ 0.82
MSC-AS1-208ENST00000522519 VAMP4O75379 141 aa20.17■□□□□ 0.82
MSC-AS1-208ENST00000522519 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms