RNA–Protein interactions for RNA: ENST00000522416.1

AP003550.1-201, humanhuman

TSL 3 BASIC

Gene AP003550.1, Length 414 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003550.1-201ENST00000522416 GYS1P13807 737 aa13.96□□□□□ -0.17
AP003550.1-201ENST00000522416 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.17
AP003550.1-201ENST00000522416 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
AP003550.1-201ENST00000522416 KDM3BQ7LBC6 1761 aa13.96□□□□□ -0.18
AP003550.1-201ENST00000522416 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
AP003550.1-201ENST00000522416 WDR43Q15061 677 aaKnown RBP eCLIP13.95□□□□□ -0.18
AP003550.1-201ENST00000522416 NEUROD2Q15784 382 aa13.95□□□□□ -0.18
AP003550.1-201ENST00000522416 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
AP003550.1-201ENST00000522416 CHD4Q14839 1912 aa13.95□□□□□ -0.18
AP003550.1-201ENST00000522416 SENP3-EIF4A1A0A087X0R7 540 aa13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 A1BGP04217 495 aa13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 ADRA2BP18089 450 aa13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 FKBP8Q14318 412 aa13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 GPR162Q16538 588 aa13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 CCDC184Q52MB2 194 aa13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 AFDNP55196 1824 aaKnown RBP13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 COL15A1P39059 1388 aa13.94□□□□□ -0.18
AP003550.1-201ENST00000522416 USP42Q9H9J4 1324 aaKnown RBP13.93□□□□□ -0.18
AP003550.1-201ENST00000522416 RIPK4P57078 832 aa13.93□□□□□ -0.18
AP003550.1-201ENST00000522416 USPL1Q5W0Q7 1092 aa13.93□□□□□ -0.18
AP003550.1-201ENST00000522416 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
AP003550.1-201ENST00000522416 ADAMTS8Q9UP79 889 aa13.93□□□□□ -0.18
AP003550.1-201ENST00000522416 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 LAMB4A4D0S4 1761 aa13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 STARD3NLO95772 234 aa13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 TAF7Q15545 349 aaPredicted RBP13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 KIAA1551Q9HCM1 1747 aa13.92□□□□□ -0.18
AP003550.1-201ENST00000522416 ZPR1O75312 459 aa13.91□□□□□ -0.18
AP003550.1-201ENST00000522416 YBX3P16989 372 aaKnown RBP eCLIP13.91□□□□□ -0.18
AP003550.1-201ENST00000522416 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
AP003550.1-201ENST00000522416 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
AP003550.1-201ENST00000522416 YY1P25490 414 aa13.9□□□□□ -0.18
AP003550.1-201ENST00000522416 DDR1Q08345 913 aa13.9□□□□□ -0.18
AP003550.1-201ENST00000522416 TBC1D2BQ9UPU7 963 aa13.9□□□□□ -0.18
AP003550.1-201ENST00000522416 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
AP003550.1-201ENST00000522416 PARP3Q9Y6F1 533 aa13.9□□□□□ -0.18
AP003550.1-201ENST00000522416 SCN7AQ01118 1682 aa13.9□□□□□ -0.18
AP003550.1-201ENST00000522416 BICDL1Q6ZP65 573 aa13.89□□□□□ -0.19
AP003550.1-201ENST00000522416 RUNDC1Q96C34 613 aa13.89□□□□□ -0.19
AP003550.1-201ENST00000522416 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
AP003550.1-201ENST00000522416 BCORQ6W2J9 1755 aa13.88□□□□□ -0.19
AP003550.1-201ENST00000522416 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
AP003550.1-201ENST00000522416 EIF5P55010 431 aaKnown RBP13.88□□□□□ -0.19
AP003550.1-201ENST00000522416 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
AP003550.1-201ENST00000522416 NARFQ9UHQ1 456 aa13.88□□□□□ -0.19
AP003550.1-201ENST00000522416 A0A0G2JLW4 131 aa13.87□□□□□ -0.19
AP003550.1-201ENST00000522416 NFIXQ14938 502 aa13.87□□□□□ -0.19
AP003550.1-201ENST00000522416 TSPYL4Q9UJ04 414 aa13.87□□□□□ -0.19
AP003550.1-201ENST00000522416 LAS1LQ9Y4W2 734 aaKnown RBP13.87□□□□□ -0.19
AP003550.1-201ENST00000522416 C10orf71Q711Q0 1435 aa13.87□□□□□ -0.19
AP003550.1-201ENST00000522416 BRCA1P38398 1863 aaKnown RBP13.87□□□□□ -0.19
AP003550.1-201ENST00000522416 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
AP003550.1-201ENST00000522416 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
AP003550.1-201ENST00000522416 POLRMTO00411 1230 aaKnown RBP13.86□□□□□ -0.19
AP003550.1-201ENST00000522416 NBPF10Q6P3W6 841 aaKnown RBP13.86□□□□□ -0.19
AP003550.1-201ENST00000522416 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
AP003550.1-201ENST00000522416 NBPF15Q8N660 670 aa13.86□□□□□ -0.19
AP003550.1-201ENST00000522416 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
AP003550.1-201ENST00000522416 DPEP1P16444 411 aa13.85□□□□□ -0.19
AP003550.1-201ENST00000522416 TM4SF1P30408 202 aa13.85□□□□□ -0.19
AP003550.1-201ENST00000522416 EIF4A1P60842 406 aaKnown RBP13.85□□□□□ -0.19
AP003550.1-201ENST00000522416 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
AP003550.1-201ENST00000522416 CCDC24Q8N4L8 307 aa13.85□□□□□ -0.19
AP003550.1-201ENST00000522416 ANKRD31Q8N7Z5 1873 aa13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 NRXN2Q9P2S2 1712 aa13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 A0A087WZG4 1122 aa13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 APAF1O14727 1248 aa13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 ANP32CO43423 234 aa13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 IL6STP40189 918 aaPredicted RBP13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 DZIP3Q86Y13 1208 aaKnown RBP13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 CACNA1SQ13698 1873 aa13.84□□□□□ -0.19
AP003550.1-201ENST00000522416 NUP98P52948 1817 aa13.83□□□□□ -0.2
AP003550.1-201ENST00000522416 GIGYF1O75420 1035 aaPredicted RBP13.83□□□□□ -0.2
AP003550.1-201ENST00000522416 CHRNA5P30532 468 aa13.83□□□□□ -0.2
AP003550.1-201ENST00000522416 LMOD3Q0VAK6 560 aa13.83□□□□□ -0.2
AP003550.1-201ENST00000522416 KRT24Q2M2I5 525 aa13.83□□□□□ -0.2
AP003550.1-201ENST00000522416 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
AP003550.1-201ENST00000522416 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
AP003550.1-201ENST00000522416 CAMTA2O94983 1202 aa13.82□□□□□ -0.2
AP003550.1-201ENST00000522416 SERPINB2P05120 415 aa13.82□□□□□ -0.2
AP003550.1-201ENST00000522416 MYL6BP14649 208 aa13.82□□□□□ -0.2
AP003550.1-201ENST00000522416 MRS2Q9HD23 443 aa13.82□□□□□ -0.2
AP003550.1-201ENST00000522416 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
AP003550.1-201ENST00000522416 ANXA1P04083 346 aa13.81□□□□□ -0.2
AP003550.1-201ENST00000522416 EIF2S2P20042 333 aaKnown RBP13.81□□□□□ -0.2
AP003550.1-201ENST00000522416 BCS1LQ9Y276 419 aa13.81□□□□□ -0.2
AP003550.1-201ENST00000522416 ARFGEF1Q9Y6D6 1849 aa13.8□□□□□ -0.2
AP003550.1-201ENST00000522416 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
AP003550.1-201ENST00000522416 COL11A2P13942 1736 aaPredicted RBP13.8□□□□□ -0.2
AP003550.1-201ENST00000522416 DLEC1Q9Y238 1755 aa13.8□□□□□ -0.2
AP003550.1-201ENST00000522416 KCNA3P22001 575 aa13.79□□□□□ -0.2
AP003550.1-201ENST00000522416 TGFB2P61812 414 aa13.79□□□□□ -0.2
AP003550.1-201ENST00000522416 HLFQ16534 295 aa13.79□□□□□ -0.2
AP003550.1-201ENST00000522416 TTLL7Q6ZT98 887 aa13.79□□□□□ -0.2
AP003550.1-201ENST00000522416 CHL1O00533 1208 aa13.78□□□□□ -0.2
AP003550.1-201ENST00000522416 GRIN3BO60391 1043 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms