RNA–Protein interactions for RNA: ENST00000522146.1

MTCL1-212, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-212ENST00000522146 TOM1L2Q6ZVM7 507 aa8.93□□□□□ -0.98
MTCL1-212ENST00000522146 MTRQ99707 1265 aa8.93□□□□□ -0.98
MTCL1-212ENST00000522146 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
MTCL1-212ENST00000522146 AATKQ6ZMQ8 1374 aa8.93□□□□□ -0.98
MTCL1-212ENST00000522146 COL5A2P05997 1499 aaPredicted RBP8.93□□□□□ -0.98
MTCL1-212ENST00000522146 RGPD3A6NKT7 1758 aaPredicted RBP8.92□□□□□ -0.98
MTCL1-212ENST00000522146 RGPD4Q7Z3J3 1758 aa8.92□□□□□ -0.98
MTCL1-212ENST00000522146 EXOC5O00471 708 aa8.92□□□□□ -0.98
MTCL1-212ENST00000522146 GPR162Q16538 588 aa8.92□□□□□ -0.98
MTCL1-212ENST00000522146 CDCA7Q9BWT1 371 aaPredicted RBP8.92□□□□□ -0.98
MTCL1-212ENST00000522146 IL21Q9HBE4 155 aa8.92□□□□□ -0.98
MTCL1-212ENST00000522146 MYOM1P52179 1685 aa8.91□□□□□ -0.98
MTCL1-212ENST00000522146 ZBTB7CA1YPR0 619 aa8.91□□□□□ -0.98
MTCL1-212ENST00000522146 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
MTCL1-212ENST00000522146 LAPTM4AQ15012 233 aa8.91□□□□□ -0.98
MTCL1-212ENST00000522146 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
MTCL1-212ENST00000522146 PAXIP1Q6ZW49 1069 aaPredicted RBP8.91□□□□□ -0.98
MTCL1-212ENST00000522146 CFAP44Q96MT7 982 aa8.91□□□□□ -0.98
MTCL1-212ENST00000522146 CARD10Q9BWT7 1032 aa8.91□□□□□ -0.98
MTCL1-212ENST00000522146 KAT6BQ8WYB5 2073 aa8.91□□□□□ -0.98
MTCL1-212ENST00000522146 MAP3K5Q99683 1374 aa8.9□□□□□ -0.98
MTCL1-212ENST00000522146 WDR17Q8IZU2 1322 aa8.9□□□□□ -0.98
MTCL1-212ENST00000522146 ARHGEF25Q86VW2 580 aa8.9□□□□□ -0.98
MTCL1-212ENST00000522146 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
MTCL1-212ENST00000522146 RNF40O75150 1001 aa8.89□□□□□ -0.99
MTCL1-212ENST00000522146 APLP1P51693 650 aa8.89□□□□□ -0.99
MTCL1-212ENST00000522146 TTC13Q8NBP0 860 aa8.89□□□□□ -0.99
MTCL1-212ENST00000522146 CABP1Q9NZU7 370 aa8.89□□□□□ -0.99
MTCL1-212ENST00000522146 ITSN1Q15811 1721 aa8.88□□□□□ -0.99
MTCL1-212ENST00000522146 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
MTCL1-212ENST00000522146 SLC16A10Q8TF71 515 aa8.88□□□□□ -0.99
MTCL1-212ENST00000522146 ZNF516Q92618 1163 aa8.88□□□□□ -0.99
MTCL1-212ENST00000522146 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
MTCL1-212ENST00000522146 NPDC1Q9NQX5 325 aaPredicted RBP8.88□□□□□ -0.99
MTCL1-212ENST00000522146 LRRC4BQ9NT99 713 aa8.88□□□□□ -0.99
MTCL1-212ENST00000522146 COL18A1P39060 1754 aa8.88□□□□□ -0.99
MTCL1-212ENST00000522146 GFRA3O60609 400 aa8.87□□□□□ -0.99
MTCL1-212ENST00000522146 SRPK2P78362 688 aaKnown RBP8.87□□□□□ -0.99
MTCL1-212ENST00000522146 ZNF827Q17R98 1081 aa8.87□□□□□ -0.99
MTCL1-212ENST00000522146 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
MTCL1-212ENST00000522146 ACSBG1Q96GR2 724 aa8.87□□□□□ -0.99
MTCL1-212ENST00000522146 CEP350Q5VT06 3117 aa8.86□□□□□ -0.99
MTCL1-212ENST00000522146 LCE2BO14633 110 aa8.86□□□□□ -0.99
MTCL1-212ENST00000522146 AMER1Q5JTC6 1135 aaPredicted RBP8.86□□□□□ -0.99
MTCL1-212ENST00000522146 PADI6Q6TGC4 694 aa8.86□□□□□ -0.99
MTCL1-212ENST00000522146 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
MTCL1-212ENST00000522146 PPIP5K1Q6PFW1 1433 aa8.86□□□□□ -0.99
MTCL1-212ENST00000522146 ARHGEF28Q8N1W1 1705 aaKnown RBP8.85□□□□□ -0.99
MTCL1-212ENST00000522146 GRIN3BO60391 1043 aa8.85□□□□□ -0.99
MTCL1-212ENST00000522146 CSB-PGBD3P0DP91 1061 aa8.85□□□□□ -0.99
MTCL1-212ENST00000522146 SWT1Q5T5J6 900 aaKnown RBP8.85□□□□□ -0.99
MTCL1-212ENST00000522146 KCNH5Q8NCM2 988 aa8.85□□□□□ -0.99
MTCL1-212ENST00000522146 NLGN2Q8NFZ4 835 aa8.85□□□□□ -0.99
MTCL1-212ENST00000522146 V9GY48 417 aaPredicted RBP8.85□□□□□ -0.99
MTCL1-212ENST00000522146 TOPAZ1Q8N9V7 1692 aa8.85□□□□□ -0.99
MTCL1-212ENST00000522146 YBX3P16989 372 aaKnown RBP eCLIP8.84□□□□□ -0.99
MTCL1-212ENST00000522146 USP6P35125 1406 aa8.84□□□□□ -0.99
MTCL1-212ENST00000522146 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
MTCL1-212ENST00000522146 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.84□□□□□ -0.99
MTCL1-212ENST00000522146 SLIT3O75094 1523 aa8.84□□□□□ -0.99
MTCL1-212ENST00000522146 TTC21BQ7Z4L5 1316 aa8.83□□□□□ -1
MTCL1-212ENST00000522146 POLD1P28340 1107 aa8.83□□□□□ -1
MTCL1-212ENST00000522146 SLC27A3Q5K4L6 730 aa8.83□□□□□ -1
MTCL1-212ENST00000522146 SLF2Q8IX21 1173 aa8.83□□□□□ -1
MTCL1-212ENST00000522146 RGPD5Q99666 1765 aa8.83□□□□□ -1
MTCL1-212ENST00000522146 CCDC7Q96M83 1385 aa8.83□□□□□ -1
MTCL1-212ENST00000522146 PNPLA7Q6ZV29 1317 aa8.82□□□□□ -1
MTCL1-212ENST00000522146 AKAP12Q02952 1782 aa8.82□□□□□ -1
MTCL1-212ENST00000522146 HSPA6P17066 643 aa8.82□□□□□ -1
MTCL1-212ENST00000522146 TRAF7Q6Q0C0 670 aa8.82□□□□□ -1
MTCL1-212ENST00000522146 NKX2-3Q8TAU0 364 aa8.82□□□□□ -1
MTCL1-212ENST00000522146 CENPJQ9HC77 1338 aaPredicted RBP8.81□□□□□ -1
MTCL1-212ENST00000522146 CPSF1Q10570 1443 aaKnown RBP8.81□□□□□ -1
MTCL1-212ENST00000522146 SHANK3Q9BYB0 1731 aa8.81□□□□□ -1
MTCL1-212ENST00000522146 NRG2O14511 850 aaPredicted RBP8.81□□□□□ -1
MTCL1-212ENST00000522146 IL2RBP14784 551 aa8.81□□□□□ -1
MTCL1-212ENST00000522146 EYA1Q99502 592 aa8.81□□□□□ -1
MTCL1-212ENST00000522146 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
MTCL1-212ENST00000522146 RAB3GAP2Q9H2M9 1393 aa8.81□□□□□ -1
MTCL1-212ENST00000522146 PAPPAQ13219 1627 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 KCNQ4P56696 695 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 COPS2P61201 443 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 NLRP2Q9NX02 1062 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 TFCP2L1Q9NZI6 479 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 WNK3Q9BYP7 1800 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 COL24A1Q17RW2 1714 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 TNS2Q63HR2 1409 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 TTC21AQ8NDW8 1320 aa8.8□□□□□ -1
MTCL1-212ENST00000522146 GPBP1L1Q9HC44 474 aaPredicted RBP8.79□□□□□ -1
MTCL1-212ENST00000522146 GOLGB1Q14789 3259 aaKnown RBP8.79□□□□□ -1
MTCL1-212ENST00000522146 BTAF1O14981 1849 aa8.78□□□□□ -1
MTCL1-212ENST00000522146 SLC4A3P48751 1232 aa8.78□□□□□ -1
MTCL1-212ENST00000522146 COL23A1Q86Y22 540 aaPredicted RBP8.78□□□□□ -1
MTCL1-212ENST00000522146 DDX54Q8TDD1 881 aaKnown RBP8.78□□□□□ -1
MTCL1-212ENST00000522146 ATP10DQ9P241 1426 aa8.78□□□□□ -1
MTCL1-212ENST00000522146 NHSQ6T4R5 1651 aa8.78□□□□□ -1
MTCL1-212ENST00000522146 EVC2Q86UK5 1308 aa8.78□□□□□ -1
MTCL1-212ENST00000522146 ZPR1O75312 459 aa8.77□□□□□ -1.01
MTCL1-212ENST00000522146 GGCXP38435 758 aa8.77□□□□□ -1.01
MTCL1-212ENST00000522146 MLLT3P42568 568 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms