RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 PRICKLE2Q7Z3G6 844 aa11.75□□□□□ -0.53
NUDCD1-204ENST00000521439 GRIP2Q9C0E4 1043 aa11.75□□□□□ -0.53
NUDCD1-204ENST00000521439 SLC35F4A4IF30 521 aa11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 CCDC155Q8N6L0 562 aa11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 GAS2L2Q8NHY3 880 aa11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 SCG3Q8WXD2 468 aaKnown RBP11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 IRF7Q92985 503 aa11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 TSPAN10Q9H1Z9 355 aaPredicted RBP11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 SCHIP1Q9P0W5 487 aaPredicted RBP11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
NUDCD1-204ENST00000521439 FOXK2Q01167 660 aa11.73□□□□□ -0.53
NUDCD1-204ENST00000521439 CENPCQ03188 943 aa11.73□□□□□ -0.53
NUDCD1-204ENST00000521439 SCNN1AP37088 669 aa11.72□□□□□ -0.53
NUDCD1-204ENST00000521439 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
NUDCD1-204ENST00000521439 TLR1Q15399 786 aa11.72□□□□□ -0.53
NUDCD1-204ENST00000521439 MTMR7Q9Y216 660 aa11.72□□□□□ -0.53
NUDCD1-204ENST00000521439 SPATA31C2B4DYI2 1134 aa11.71□□□□□ -0.53
NUDCD1-204ENST00000521439 CDK2AP1O14519 115 aa11.71□□□□□ -0.53
NUDCD1-204ENST00000521439 FOXO3O43524 673 aa11.71□□□□□ -0.53
NUDCD1-204ENST00000521439 C21orf2O43822 256 aa11.71□□□□□ -0.53
NUDCD1-204ENST00000521439 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
NUDCD1-204ENST00000521439 RHOQP17081 205 aa11.7□□□□□ -0.54
NUDCD1-204ENST00000521439 GTF2E1P29083 439 aaPredicted RBP11.7□□□□□ -0.54
NUDCD1-204ENST00000521439 SLC9A9Q8IVB4 645 aa11.7□□□□□ -0.54
NUDCD1-204ENST00000521439 ZSCAN10Q96SZ4 725 aaPredicted RBP11.7□□□□□ -0.54
NUDCD1-204ENST00000521439 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
NUDCD1-204ENST00000521439 VSIG8P0DPA2 414 aa11.69□□□□□ -0.54
NUDCD1-204ENST00000521439 WDR44Q5JSH3 913 aa11.69□□□□□ -0.54
NUDCD1-204ENST00000521439 PPP1R12BO60237 982 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 POU4F2Q12837 409 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 TBCELQ5QJ74 424 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 LCE2CQ5TA81 110 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 TMCO4Q5TGY1 634 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 STAG2Q8N3U4 1231 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 NBPF15Q8N660 670 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 COL26A1Q96A83 441 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 MKNK1Q9BUB5 465 aa11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 IQSEC3Q9UPP2 1182 aaPredicted RBP11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
NUDCD1-204ENST00000521439 ERBB4Q15303 1308 aa11.67□□□□□ -0.54
NUDCD1-204ENST00000521439 ITGA6P23229 1130 aa11.67□□□□□ -0.54
NUDCD1-204ENST00000521439 SERPINB4P48594 390 aa11.67□□□□□ -0.54
NUDCD1-204ENST00000521439 USP3Q9Y6I4 520 aa11.67□□□□□ -0.54
NUDCD1-204ENST00000521439 PSMA6P60900 246 aaKnown RBP11.66□□□□□ -0.54
NUDCD1-204ENST00000521439 GNASQ5JWF2 1037 aa11.66□□□□□ -0.54
NUDCD1-204ENST00000521439 TMEM214Q6NUQ4 689 aaKnown RBP11.66□□□□□ -0.54
NUDCD1-204ENST00000521439 SND1Q7KZF4 910 aaKnown RBP eCLIP11.66□□□□□ -0.54
NUDCD1-204ENST00000521439 WIPF1O43516 503 aa11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 CAPN12Q6ZSI9 719 aa11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 NANOS1Q8WY41 292 aaKnown RBP11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 VTI1AQ96AJ9 217 aa11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 C2orf49Q9BVC5 232 aaPredicted RBP11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 SEPT3Q9UH03 358 aa11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 DYRK1BQ9Y463 629 aa11.65□□□□□ -0.54
NUDCD1-204ENST00000521439 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
NUDCD1-204ENST00000521439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.64□□□□□ -0.551e-6■■■■■ 113.1
NUDCD1-204ENST00000521439 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
NUDCD1-204ENST00000521439 TIMMDC1Q9NPL8 285 aa11.63□□□□□ -0.55
NUDCD1-204ENST00000521439 EGFL7Q9UHF1 273 aa11.63□□□□□ -0.55
NUDCD1-204ENST00000521439 SOWAHDA6NJG2 315 aa11.62□□□□□ -0.55
NUDCD1-204ENST00000521439 ABL1P00519 1130 aa11.62□□□□□ -0.55
NUDCD1-204ENST00000521439 GMPRP36959 345 aa11.62□□□□□ -0.55
NUDCD1-204ENST00000521439 TEAD4Q15561 434 aa11.62□□□□□ -0.55
NUDCD1-204ENST00000521439 GTF3C2Q8WUA4 911 aaPredicted RBP11.62□□□□□ -0.55
NUDCD1-204ENST00000521439 SERTM1A2A2V5 107 aa11.61□□□□□ -0.55
NUDCD1-204ENST00000521439 NAA30Q147X3 362 aaPredicted RBP11.61□□□□□ -0.55
NUDCD1-204ENST00000521439 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
NUDCD1-204ENST00000521439 POTEAQ6S8J7 498 aa11.61□□□□□ -0.55
NUDCD1-204ENST00000521439 ZNF295-AS1Q8N0V1 137 aa11.61□□□□□ -0.55
NUDCD1-204ENST00000521439 CABP1Q9NZU7 370 aa11.61□□□□□ -0.55
NUDCD1-204ENST00000521439 CDC14CA4D256 554 aa11.6□□□□□ -0.55
NUDCD1-204ENST00000521439 NOS2P35228 1153 aa11.6□□□□□ -0.55
NUDCD1-204ENST00000521439 SV2AQ7L0J3 742 aa11.6□□□□□ -0.55
NUDCD1-204ENST00000521439 ZDHHC1Q8WTX9 485 aa11.6□□□□□ -0.55
NUDCD1-204ENST00000521439 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
NUDCD1-204ENST00000521439 NIFKQ9BYG3 293 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-204ENST00000521439 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
NUDCD1-204ENST00000521439 EML1O00423 815 aa11.59□□□□□ -0.55
NUDCD1-204ENST00000521439 PHKA2P46019 1235 aa11.59□□□□□ -0.55
NUDCD1-204ENST00000521439 MFAP1P55081 439 aaKnown RBP11.59□□□□□ -0.55
NUDCD1-204ENST00000521439 L3MBTL2Q969R5 705 aa11.59□□□□□ -0.55
NUDCD1-204ENST00000521439 GAS2L1Q99501 681 aaPredicted RBP11.59□□□□□ -0.55
NUDCD1-204ENST00000521439 H7C1W4 665 aa11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 ICMTO60725 284 aa11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 RIPOR1Q6ZS17 1223 aa11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 VWA5B2Q8N398 1253 aa11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 ANO2Q9NQ90 1003 aa11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 ZNF232Q9UNY5 417 aa11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 DNMT3AQ9Y6K1 912 aaPredicted RBP11.58□□□□□ -0.56
NUDCD1-204ENST00000521439 F11P03951 625 aa11.57□□□□□ -0.56
NUDCD1-204ENST00000521439 ZNF211Q13398 564 aaPredicted RBP11.57□□□□□ -0.56
NUDCD1-204ENST00000521439 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
NUDCD1-204ENST00000521439 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
NUDCD1-204ENST00000521439 TRIM22Q8IYM9 498 aa11.57□□□□□ -0.56
NUDCD1-204ENST00000521439 CUEDC1Q9NWM3 386 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms