RNA–Protein interactions for RNA: ENST00000521402.1

CNOT8-216, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 4

Gene CNOT8, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-216ENST00000521402 USP17L3A6NCW0 530 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 USP17L4A6NCW7 530 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 PSME1Q06323 249 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 FOXD4L5Q5VV16 416 aaPredicted RBP12.56□□□□□ -0.4
CNOT8-216ENST00000521402 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 USP17L1Q7RTZ2 530 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
CNOT8-216ENST00000521402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.4
CNOT8-216ENST00000521402 STAU1O95793 577 aaKnown RBP12.55□□□□□ -0.4
CNOT8-216ENST00000521402 RNF144AP50876 292 aaPredicted RBP12.55□□□□□ -0.4
CNOT8-216ENST00000521402 MYO5CQ9NQX4 1742 aa12.54□□□□□ -0.4
CNOT8-216ENST00000521402 LYSMD3Q7Z3D4 306 aa12.54□□□□□ -0.4
CNOT8-216ENST00000521402 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
CNOT8-216ENST00000521402 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
CNOT8-216ENST00000521402 CDC42BPAQ5VT25 1732 aa12.54□□□□□ -0.4
CNOT8-216ENST00000521402 CDC42BPBQ9Y5S2 1711 aa12.54□□□□□ -0.4
CNOT8-216ENST00000521402 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
CNOT8-216ENST00000521402 CD109Q6YHK3 1445 aa12.54□□□□□ -0.4
CNOT8-216ENST00000521402 PALM3A6NDB9 673 aaPredicted RBP12.53□□□□□ -0.4
CNOT8-216ENST00000521402 IL2RAP01589 272 aa12.53□□□□□ -0.4
CNOT8-216ENST00000521402 GTF2IP78347 998 aa12.53□□□□□ -0.4
CNOT8-216ENST00000521402 ESYT1Q9BSJ8 1104 aa12.53□□□□□ -0.4
CNOT8-216ENST00000521402 ETNK1Q9HBU6 452 aa12.53□□□□□ -0.4
CNOT8-216ENST00000521402 NXF1Q9UBU9 619 aaKnown RBP12.53□□□□□ -0.4
CNOT8-216ENST00000521402 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
CNOT8-216ENST00000521402 GPC1P35052 558 aa12.52□□□□□ -0.41
CNOT8-216ENST00000521402 VEGFBP49765 207 aa12.52□□□□□ -0.41
CNOT8-216ENST00000521402 TRIM50Q86XT4 487 aa12.52□□□□□ -0.41
CNOT8-216ENST00000521402 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
CNOT8-216ENST00000521402 GDF10P55107 478 aa12.51□□□□□ -0.41
CNOT8-216ENST00000521402 CENPCQ03188 943 aa12.51□□□□□ -0.41
CNOT8-216ENST00000521402 PTSQ03393 145 aa12.51□□□□□ -0.41
CNOT8-216ENST00000521402 XAGE2Q96GT9 111 aa12.51□□□□□ -0.41
CNOT8-216ENST00000521402 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
CNOT8-216ENST00000521402 PCDHGA11Q9Y5H2 935 aa12.51□□□□□ -0.41
CNOT8-216ENST00000521402 MAFBQ9Y5Q3 323 aaPredicted RBP12.51□□□□□ -0.41
CNOT8-216ENST00000521402 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
CNOT8-216ENST00000521402 LMOD1P29536 600 aaPredicted RBP12.5□□□□□ -0.41
CNOT8-216ENST00000521402 KANK4Q5T7N3 995 aaPredicted RBP12.5□□□□□ -0.41
CNOT8-216ENST00000521402 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
CNOT8-216ENST00000521402 TERTO14746 1132 aaKnown RBP12.49□□□□□ -0.41
CNOT8-216ENST00000521402 RHOQP17081 205 aa12.49□□□□□ -0.41
CNOT8-216ENST00000521402 SERTAD1Q9UHV2 236 aa12.49□□□□□ -0.41
CNOT8-216ENST00000521402 INHAP05111 366 aa12.48□□□□□ -0.41
CNOT8-216ENST00000521402 ATP1A2P50993 1020 aa12.48□□□□□ -0.41
CNOT8-216ENST00000521402 POU4F2Q12837 409 aa12.48□□□□□ -0.41
CNOT8-216ENST00000521402 SLC16A10Q8TF71 515 aa12.48□□□□□ -0.41
CNOT8-216ENST00000521402 ZSCAN10Q96SZ4 725 aaPredicted RBP12.48□□□□□ -0.41
CNOT8-216ENST00000521402 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
CNOT8-216ENST00000521402 SUPT6HQ7KZ85 1726 aaKnown RBP12.48□□□□□ -0.41
CNOT8-216ENST00000521402 KDM6BO15054 1643 aa12.48□□□□□ -0.41
CNOT8-216ENST00000521402 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
CNOT8-216ENST00000521402 SCNN1DP51172 638 aa12.47□□□□□ -0.41
CNOT8-216ENST00000521402 TLR1Q15399 786 aa12.47□□□□□ -0.41
CNOT8-216ENST00000521402 TMEM214Q6NUQ4 689 aaKnown RBP12.47□□□□□ -0.41
CNOT8-216ENST00000521402 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.41
CNOT8-216ENST00000521402 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.41
CNOT8-216ENST00000521402 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
CNOT8-216ENST00000521402 PREX2Q70Z35 1606 aa12.46□□□□□ -0.41
CNOT8-216ENST00000521402 WFS1O76024 890 aa12.45□□□□□ -0.42
CNOT8-216ENST00000521402 RFX1P22670 979 aa12.45□□□□□ -0.42
CNOT8-216ENST00000521402 OGFOD1Q8N543 542 aa12.45□□□□□ -0.42
CNOT8-216ENST00000521402 DNAAF2Q9NVR5 837 aaKnown RBP12.45□□□□□ -0.42
CNOT8-216ENST00000521402 TEX14Q8IWB6 1497 aa12.45□□□□□ -0.42
CNOT8-216ENST00000521402 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
CNOT8-216ENST00000521402 PPFIA3O75145 1194 aa12.44□□□□□ -0.42
CNOT8-216ENST00000521402 RASA1P20936 1047 aa12.44□□□□□ -0.42
CNOT8-216ENST00000521402 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
CNOT8-216ENST00000521402 CCDC155Q8N6L0 562 aa12.44□□□□□ -0.42
CNOT8-216ENST00000521402 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
CNOT8-216ENST00000521402 RBM19Q9Y4C8 960 aaKnown RBP12.44□□□□□ -0.42
CNOT8-216ENST00000521402 HRH3Q9Y5N1 445 aa12.44□□□□□ -0.42
CNOT8-216ENST00000521402 PLCH2O75038 1416 aa12.44□□□□□ -0.42
CNOT8-216ENST00000521402 ARHGAP5Q13017 1502 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 FANCAO15360 1455 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 TMEM229AB2RXF0 380 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 CLDN10P78369 228 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 GNASQ5JWF2 1037 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 CCDC102BQ68D86 513 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 TREML4Q6UXN2 200 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 NPAS3Q8IXF0 933 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 TPCN2Q8NHX9 752 aa12.43□□□□□ -0.42
CNOT8-216ENST00000521402 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
CNOT8-216ENST00000521402 NCOA2Q15596 1464 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 SLC35F4A4IF30 521 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 BACH1O14867 736 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 PHKA2P46019 1235 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 SMTNP53814 917 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
CNOT8-216ENST00000521402 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
CNOT8-216ENST00000521402 TAS1R3Q7RTX0 852 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 NBPF15Q8N660 670 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 CCDC97Q96F63 343 aaPredicted RBP12.42□□□□□ -0.42
CNOT8-216ENST00000521402 FHDC1Q9C0D6 1143 aaPredicted RBP12.42□□□□□ -0.42
CNOT8-216ENST00000521402 VRTNQ9H8Y1 702 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
CNOT8-216ENST00000521402 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
CNOT8-216ENST00000521402 WASLO00401 505 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms