RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 IGHA1P01876 353 aa6.77□□□□□ -1.33
VPS13B-208ENST00000521037 ADD1P35611 737 aaKnown RBP6.77□□□□□ -1.33
VPS13B-208ENST00000521037 EFCAB2Q5VUJ9 269 aa6.77□□□□□ -1.33
VPS13B-208ENST00000521037 LRRN4Q8WUT4 740 aa6.77□□□□□ -1.33
VPS13B-208ENST00000521037 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
VPS13B-208ENST00000521037 CUEDC1Q9NWM3 386 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-208ENST00000521037 FKBPLQ9UIM3 349 aa6.77□□□□□ -1.33
VPS13B-208ENST00000521037 ZC3H13Q5T200 1668 aaKnown RBP6.77□□□□□ -1.33
VPS13B-208ENST00000521037 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
VPS13B-208ENST00000521037 RELBQ01201 579 aa6.76□□□□□ -1.33
VPS13B-208ENST00000521037 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
VPS13B-208ENST00000521037 FOXD4L5Q5VV16 416 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-208ENST00000521037 GPAT2Q6NUI2 795 aa6.76□□□□□ -1.33
VPS13B-208ENST00000521037 KANK3Q6NY19 840 aa6.76□□□□□ -1.33
VPS13B-208ENST00000521037 SYNMO15061 1565 aa6.76□□□□□ -1.33
VPS13B-208ENST00000521037 NPHP4O75161 1426 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-208ENST00000521037 ITGB2P05107 769 aa6.75□□□□□ -1.33
VPS13B-208ENST00000521037 TPRNQ4KMQ1 711 aa6.75□□□□□ -1.33
VPS13B-208ENST00000521037 ZNF395Q9H8N7 513 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-208ENST00000521037 TMPRSS4Q9NRS4 437 aa6.75□□□□□ -1.33
VPS13B-208ENST00000521037 POLR3EQ9NVU0 708 aa6.75□□□□□ -1.33
VPS13B-208ENST00000521037 MYO5CQ9NQX4 1742 aa6.75□□□□□ -1.33
VPS13B-208ENST00000521037 CDC42BPBQ9Y5S2 1711 aa6.75□□□□□ -1.33
VPS13B-208ENST00000521037 ZC3H4Q9UPT8 1303 aaKnown RBP6.75□□□□□ -1.33
VPS13B-208ENST00000521037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS13B-208ENST00000521037 SUPT6HQ7KZ85 1726 aaKnown RBP6.74□□□□□ -1.33
VPS13B-208ENST00000521037 CDC14CA4D256 554 aa6.74□□□□□ -1.33
VPS13B-208ENST00000521037 CELA2BP08218 269 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-208ENST00000521037 SRSF11Q05519 484 aaKnown RBP6.74□□□□□ -1.33
VPS13B-208ENST00000521037 NR6A1Q15406 480 aa6.74□□□□□ -1.33
VPS13B-208ENST00000521037 MAP3K1Q13233 1512 aa6.74□□□□□ -1.33
VPS13B-208ENST00000521037 ITSN2Q9NZM3 1697 aa6.74□□□□□ -1.33
VPS13B-208ENST00000521037 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
VPS13B-208ENST00000521037 CDK12Q9NYV4 1490 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-208ENST00000521037 FOXK2Q01167 660 aa6.73□□□□□ -1.33
VPS13B-208ENST00000521037 ZNF784Q8NCA9 323 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-208ENST00000521037 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
VPS13B-208ENST00000521037 SCARF2Q96GP6 870 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-208ENST00000521037 RSPH6AQ9H0K4 717 aa6.73□□□□□ -1.33
VPS13B-208ENST00000521037 GPSM3Q9Y4H4 160 aa6.73□□□□□ -1.33
VPS13B-208ENST00000521037 IQGAP1P46940 1657 aa6.72□□□□□ -1.33
VPS13B-208ENST00000521037 ESPNB1AK53 854 aa6.72□□□□□ -1.33
VPS13B-208ENST00000521037 PTGIRP43119 386 aa6.72□□□□□ -1.33
VPS13B-208ENST00000521037 ZBTB33Q86T24 672 aa6.72□□□□□ -1.33
VPS13B-208ENST00000521037 ADAM32Q8TC27 787 aa6.72□□□□□ -1.33
VPS13B-208ENST00000521037 ROBO1Q9Y6N7 1651 aa6.71□□□□□ -1.33
VPS13B-208ENST00000521037 ARHGAP5Q13017 1502 aa6.71□□□□□ -1.33
VPS13B-208ENST00000521037 ERVH48-1M5A8F1 160 aa6.71□□□□□ -1.34
VPS13B-208ENST00000521037 ADH1AP07327 375 aa6.71□□□□□ -1.34
VPS13B-208ENST00000521037 MARSP56192 900 aaKnown RBP6.71□□□□□ -1.34
VPS13B-208ENST00000521037 PPP2R2DQ66LE6 453 aa6.71□□□□□ -1.34
VPS13B-208ENST00000521037 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.71□□□□□ -1.34
VPS13B-208ENST00000521037 POLMQ9NP87 494 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-208ENST00000521037 COL16A1Q07092 1604 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-208ENST00000521037 INO80Q9ULG1 1556 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-208ENST00000521037 RGS12O14924 1447 aa6.7□□□□□ -1.34
VPS13B-208ENST00000521037 PTK2Q05397 1052 aa6.7□□□□□ -1.34
VPS13B-208ENST00000521037 EPS8L1Q8TE68 723 aa6.7□□□□□ -1.34
VPS13B-208ENST00000521037 PZPP20742 1482 aa6.69□□□□□ -1.34
VPS13B-208ENST00000521037 RNF144AP50876 292 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-208ENST00000521037 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
VPS13B-208ENST00000521037 SLC24A3Q9HC58 644 aa6.69□□□□□ -1.34
VPS13B-208ENST00000521037 TNRQ92752 1358 aa6.69□□□□□ -1.34
VPS13B-208ENST00000521037 PREX2Q70Z35 1606 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 TROQ12816 1431 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-208ENST00000521037 A2MP01023 1474 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 LRRIQ1Q96JM4 1722 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 DBN1Q16643 649 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 PLA2G4EQ3MJ16 856 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 LYSMD3Q7Z3D4 306 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 ANKLE2Q86XL3 938 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 PROCA1Q8NCQ7 364 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-208ENST00000521037 ZNF837Q96EG3 531 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-208ENST00000521037 DCAF5Q96JK2 942 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 CNTNAP5Q8WYK1 1306 aa6.68□□□□□ -1.34
VPS13B-208ENST00000521037 MIA2Q96PC5 1412 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 NCOA2Q15596 1464 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 ATP7AQ04656 1500 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 DIP2AQ14689 1571 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 ADAM23O75077 832 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 SKIV2LQ15477 1246 aaKnown RBP6.67□□□□□ -1.34
VPS13B-208ENST00000521037 XP32Q5T750 250 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 TRIM22Q8IYM9 498 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 ESF1Q9H501 851 aaKnown RBP6.67□□□□□ -1.34
VPS13B-208ENST00000521037 JCADQ9P266 1359 aa6.67□□□□□ -1.34
VPS13B-208ENST00000521037 ARHGAP23Q9P227 1491 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 UGGT1Q9NYU2 1555 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 PROCP04070 461 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 LTKP29376 864 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 NBPF20Q3BBV1 942 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 HMX1Q9NP08 348 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-208ENST00000521037 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 NLRP1Q9C000 1473 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 KDM5DQ9BY66 1539 aa6.66□□□□□ -1.34
VPS13B-208ENST00000521037 CEP350Q5VT06 3117 aa6.65□□□□□ -1.34
VPS13B-208ENST00000521037 PRICKLE2Q7Z3G6 844 aa6.65□□□□□ -1.34
VPS13B-208ENST00000521037 ACDQ96AP0 544 aa6.65□□□□□ -1.34
VPS13B-208ENST00000521037 SPOCK3Q9BQ16 436 aa6.65□□□□□ -1.34
VPS13B-208ENST00000521037 TMEM94Q12767 1356 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms