RNA–Protein interactions for RNA: ENST00000520330.1

SNRPCP17-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 17, humanhuman

BASIC

Gene SNRPCP17, Length 205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP17-201ENST00000520330 PTGER2P43116 358 aa12.8□□□□□ -0.36
SNRPCP17-201ENST00000520330 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
SNRPCP17-201ENST00000520330 AMIGO3Q86WK7 504 aa12.8□□□□□ -0.36
SNRPCP17-201ENST00000520330 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
SNRPCP17-201ENST00000520330 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
SNRPCP17-201ENST00000520330 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
SNRPCP17-201ENST00000520330 TSPYL4Q9UJ04 414 aa12.79□□□□□ -0.36
SNRPCP17-201ENST00000520330 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
SNRPCP17-201ENST00000520330 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
SNRPCP17-201ENST00000520330 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
SNRPCP17-201ENST00000520330 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
SNRPCP17-201ENST00000520330 NPM2Q86SE8 214 aaKnown RBP12.78□□□□□ -0.36
SNRPCP17-201ENST00000520330 ARXQ96QS3 562 aa12.78□□□□□ -0.36
SNRPCP17-201ENST00000520330 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
SNRPCP17-201ENST00000520330 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
SNRPCP17-201ENST00000520330 A0A087WZG4 1122 aa12.77□□□□□ -0.37
SNRPCP17-201ENST00000520330 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
SNRPCP17-201ENST00000520330 NLGN1Q8N2Q7 840 aa12.77□□□□□ -0.37
SNRPCP17-201ENST00000520330 ZBTB1Q9Y2K1 713 aa12.77□□□□□ -0.37
SNRPCP17-201ENST00000520330 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
SNRPCP17-201ENST00000520330 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
SNRPCP17-201ENST00000520330 CCER2I3L3R5 266 aa12.76□□□□□ -0.37
SNRPCP17-201ENST00000520330 CHL1O00533 1208 aa12.76□□□□□ -0.37
SNRPCP17-201ENST00000520330 ZPR1O75312 459 aa12.76□□□□□ -0.37
SNRPCP17-201ENST00000520330 A1BGP04217 495 aa12.76□□□□□ -0.37
SNRPCP17-201ENST00000520330 IL6STP40189 918 aaPredicted RBP12.76□□□□□ -0.37
SNRPCP17-201ENST00000520330 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
SNRPCP17-201ENST00000520330 C4AP0C0L4 1744 aa12.75□□□□□ -0.37
SNRPCP17-201ENST00000520330 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
SNRPCP17-201ENST00000520330 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
SNRPCP17-201ENST00000520330 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
SNRPCP17-201ENST00000520330 COL15A1P39059 1388 aa12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 GYS1P13807 737 aa12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 GNAI1P63096 354 aa12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 CCDC27Q2M243 656 aa12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 NARFQ9UHQ1 456 aa12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 LAMB4A4D0S4 1761 aa12.74□□□□□ -0.37
SNRPCP17-201ENST00000520330 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
SNRPCP17-201ENST00000520330 NGEFQ8N5V2 710 aa12.73□□□□□ -0.37
SNRPCP17-201ENST00000520330 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
SNRPCP17-201ENST00000520330 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
SNRPCP17-201ENST00000520330 SENP3-EIF4A1A0A087X0R7 540 aa12.72□□□□□ -0.37
SNRPCP17-201ENST00000520330 MMP10P09238 476 aa12.72□□□□□ -0.37
SNRPCP17-201ENST00000520330 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
SNRPCP17-201ENST00000520330 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
SNRPCP17-201ENST00000520330 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
SNRPCP17-201ENST00000520330 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
SNRPCP17-201ENST00000520330 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
SNRPCP17-201ENST00000520330 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
SNRPCP17-201ENST00000520330 FKBP8Q14318 412 aa12.71□□□□□ -0.37
SNRPCP17-201ENST00000520330 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
SNRPCP17-201ENST00000520330 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.37
SNRPCP17-201ENST00000520330 PARP3Q9Y6F1 533 aa12.71□□□□□ -0.37
SNRPCP17-201ENST00000520330 NBPF26B4DH59 902 aa12.7□□□□□ -0.38
SNRPCP17-201ENST00000520330 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
SNRPCP17-201ENST00000520330 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
SNRPCP17-201ENST00000520330 NBPF10Q6P3W6 841 aaKnown RBP12.7□□□□□ -0.38
SNRPCP17-201ENST00000520330 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
SNRPCP17-201ENST00000520330 NBPF15Q8N660 670 aa12.7□□□□□ -0.38
SNRPCP17-201ENST00000520330 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
SNRPCP17-201ENST00000520330 IL16Q14005 1332 aa12.69□□□□□ -0.38
SNRPCP17-201ENST00000520330 ERBB4Q15303 1308 aa12.69□□□□□ -0.38
SNRPCP17-201ENST00000520330 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
SNRPCP17-201ENST00000520330 CD2APQ9Y5K6 639 aa12.69□□□□□ -0.38
SNRPCP17-201ENST00000520330 HOXB7P09629 217 aa12.68□□□□□ -0.38
SNRPCP17-201ENST00000520330 MYL6BP14649 208 aa12.68□□□□□ -0.38
SNRPCP17-201ENST00000520330 TM4SF1P30408 202 aa12.68□□□□□ -0.38
SNRPCP17-201ENST00000520330 MIER1Q8N108 512 aa12.68□□□□□ -0.38
SNRPCP17-201ENST00000520330 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
SNRPCP17-201ENST00000520330 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
SNRPCP17-201ENST00000520330 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
SNRPCP17-201ENST00000520330 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
SNRPCP17-201ENST00000520330 ZNF652Q9Y2D9 606 aa12.67□□□□□ -0.38
SNRPCP17-201ENST00000520330 RGL2O15211 777 aa12.66□□□□□ -0.38
SNRPCP17-201ENST00000520330 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
SNRPCP17-201ENST00000520330 NFIXQ14938 502 aa12.66□□□□□ -0.38
SNRPCP17-201ENST00000520330 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
SNRPCP17-201ENST00000520330 CLEC4GQ6UXB4 293 aa12.66□□□□□ -0.38
SNRPCP17-201ENST00000520330 KIF6Q6ZMV9 814 aa12.66□□□□□ -0.38
SNRPCP17-201ENST00000520330 NECTIN2Q92692 538 aa12.66□□□□□ -0.38
SNRPCP17-201ENST00000520330 SCN7AQ01118 1682 aa12.65□□□□□ -0.38
SNRPCP17-201ENST00000520330 ELL2O00472 640 aaPredicted RBP12.65□□□□□ -0.38
SNRPCP17-201ENST00000520330 DDR1Q08345 913 aa12.65□□□□□ -0.38
SNRPCP17-201ENST00000520330 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
SNRPCP17-201ENST00000520330 SETDB2Q96T68 719 aa12.65□□□□□ -0.38
SNRPCP17-201ENST00000520330 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNRPCP17-201ENST00000520330 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.39
SNRPCP17-201ENST00000520330 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 POLRMTO00411 1230 aaKnown RBP12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 SERPINB2P05120 415 aa12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 PDIA6Q15084 440 aa12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 TBC1D9BQ66K14 1250 aa12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
SNRPCP17-201ENST00000520330 DBF4Q9UBU7 674 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms