RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 C4AP0C0L4 1744 aa18.67■□□□□ 0.58
VEGFA-221ENST00000520265 COL24A1Q17RW2 1714 aa18.67■□□□□ 0.58
VEGFA-221ENST00000520265 ZPR1O75312 459 aa18.67■□□□□ 0.58
VEGFA-221ENST00000520265 RIPK4P57078 832 aa18.67■□□□□ 0.58
VEGFA-221ENST00000520265 GPR162Q16538 588 aa18.67■□□□□ 0.58
VEGFA-221ENST00000520265 NLGN2Q8NFZ4 835 aa18.67■□□□□ 0.58
VEGFA-221ENST00000520265 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
VEGFA-221ENST00000520265 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-221ENST00000520265 ANP32CO43423 234 aa18.66■□□□□ 0.58
VEGFA-221ENST00000520265 NLGN1Q8N2Q7 840 aa18.66■□□□□ 0.58
VEGFA-221ENST00000520265 COL15A1P39059 1388 aa18.66■□□□□ 0.58
VEGFA-221ENST00000520265 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
VEGFA-221ENST00000520265 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-221ENST00000520265 TEX13AQ9BXU3 409 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-221ENST00000520265 SOS1Q07889 1333 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-221ENST00000520265 GYS1P13807 737 aa18.64■□□□□ 0.57
VEGFA-221ENST00000520265 RUNDC1Q96C34 613 aa18.64■□□□□ 0.57
VEGFA-221ENST00000520265 WWC3Q9ULE0 1092 aa18.64■□□□□ 0.57
VEGFA-221ENST00000520265 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
VEGFA-221ENST00000520265 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
VEGFA-221ENST00000520265 USP42Q9H9J4 1324 aaKnown RBP18.64■□□□□ 0.57
VEGFA-221ENST00000520265 TMPOP42166 694 aaKnown RBP18.63■□□□□ 0.57
VEGFA-221ENST00000520265 USPL1Q5W0Q7 1092 aa18.63■□□□□ 0.57
VEGFA-221ENST00000520265 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
VEGFA-221ENST00000520265 PRAMEF22A3QJZ6 481 aa18.61■□□□□ 0.57
VEGFA-221ENST00000520265 A1BGP04217 495 aa18.61■□□□□ 0.57
VEGFA-221ENST00000520265 SNRPA1P09661 255 aaKnown RBP18.61■□□□□ 0.57
VEGFA-221ENST00000520265 PIP4K2AP48426 406 aaPredicted RBP18.61■□□□□ 0.57
VEGFA-221ENST00000520265 FKBP8Q14318 412 aa18.61■□□□□ 0.57
VEGFA-221ENST00000520265 TSPYL4Q9UJ04 414 aa18.61■□□□□ 0.57
VEGFA-221ENST00000520265 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
VEGFA-221ENST00000520265 CD2APQ9Y5K6 639 aa18.61■□□□□ 0.57
VEGFA-221ENST00000520265 A0A087WZG4 1122 aa18.59■□□□□ 0.57
VEGFA-221ENST00000520265 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
VEGFA-221ENST00000520265 YY1P25490 414 aa18.58■□□□□ 0.56
VEGFA-221ENST00000520265 BICDL1Q6ZP65 573 aa18.58■□□□□ 0.56
VEGFA-221ENST00000520265 MRS2Q9HD23 443 aa18.58■□□□□ 0.56
VEGFA-221ENST00000520265 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
VEGFA-221ENST00000520265 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
VEGFA-221ENST00000520265 NPHP1O15259 732 aa18.56■□□□□ 0.56
VEGFA-221ENST00000520265 IL6STP40189 918 aaPredicted RBP18.56■□□□□ 0.56
VEGFA-221ENST00000520265 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
VEGFA-221ENST00000520265 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
VEGFA-221ENST00000520265 EIF5P55010 431 aaKnown RBP18.55■□□□□ 0.56
VEGFA-221ENST00000520265 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
VEGFA-221ENST00000520265 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
VEGFA-221ENST00000520265 DDR1Q08345 913 aa18.54■□□□□ 0.56
VEGFA-221ENST00000520265 DZIP3Q86Y13 1208 aaKnown RBP18.54■□□□□ 0.56
VEGFA-221ENST00000520265 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
VEGFA-221ENST00000520265 APAF1O14727 1248 aa18.53■□□□□ 0.56
VEGFA-221ENST00000520265 EIF4A1P60842 406 aaKnown RBP18.53■□□□□ 0.56
VEGFA-221ENST00000520265 NFIXQ14938 502 aa18.53■□□□□ 0.56
VEGFA-221ENST00000520265 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
VEGFA-221ENST00000520265 YBX3P16989 372 aaKnown RBP eCLIP18.52■□□□□ 0.56
VEGFA-221ENST00000520265 SCN7AQ01118 1682 aa18.51■□□□□ 0.55
VEGFA-221ENST00000520265 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
VEGFA-221ENST00000520265 POLRMTO00411 1230 aaKnown RBP18.51■□□□□ 0.55
VEGFA-221ENST00000520265 MYL6BP14649 208 aa18.51■□□□□ 0.55
VEGFA-221ENST00000520265 EIF2S2P20042 333 aaKnown RBP18.51■□□□□ 0.55
VEGFA-221ENST00000520265 GRIN3BO60391 1043 aa18.5■□□□□ 0.55
VEGFA-221ENST00000520265 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
VEGFA-221ENST00000520265 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
VEGFA-221ENST00000520265 NECTIN2Q92692 538 aa18.5■□□□□ 0.55
VEGFA-221ENST00000520265 BCL2L12Q9HB09 334 aa18.5■□□□□ 0.55
VEGFA-221ENST00000520265 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
VEGFA-221ENST00000520265 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
VEGFA-221ENST00000520265 SERPINB2P05120 415 aa18.49■□□□□ 0.55
VEGFA-221ENST00000520265 BCS1LQ9Y276 419 aa18.49■□□□□ 0.55
VEGFA-221ENST00000520265 ZNF652Q9Y2D9 606 aa18.49■□□□□ 0.55
VEGFA-221ENST00000520265 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
VEGFA-221ENST00000520265 DPEP1P16444 411 aa18.48■□□□□ 0.55
VEGFA-221ENST00000520265 TM4SF1P30408 202 aa18.48■□□□□ 0.55
VEGFA-221ENST00000520265 TGFB2P61812 414 aa18.48■□□□□ 0.55
VEGFA-221ENST00000520265 KIF6Q6ZMV9 814 aa18.48■□□□□ 0.55
VEGFA-221ENST00000520265 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
VEGFA-221ENST00000520265 CAMTA2O94983 1202 aa18.47■□□□□ 0.55
VEGFA-221ENST00000520265 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
VEGFA-221ENST00000520265 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
VEGFA-221ENST00000520265 SETDB2Q96T68 719 aa18.47■□□□□ 0.55
VEGFA-221ENST00000520265 CARMIL3Q8ND23 1372 aa18.46■□□□□ 0.55
VEGFA-221ENST00000520265 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
VEGFA-221ENST00000520265 CHRNA5P30532 468 aa18.46■□□□□ 0.55
VEGFA-221ENST00000520265 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
VEGFA-221ENST00000520265 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
VEGFA-221ENST00000520265 KIF13BQ9NQT8 1826 aa18.46■□□□□ 0.55
VEGFA-221ENST00000520265 BCORQ6W2J9 1755 aa18.45■□□□□ 0.54
VEGFA-221ENST00000520265 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
VEGFA-221ENST00000520265 CCDC24Q8N4L8 307 aa18.45■□□□□ 0.54
VEGFA-221ENST00000520265 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
VEGFA-221ENST00000520265 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
VEGFA-221ENST00000520265 GOLGB1Q14789 3259 aaKnown RBP18.44■□□□□ 0.54
VEGFA-221ENST00000520265 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
VEGFA-221ENST00000520265 CHD4Q14839 1912 aa18.44■□□□□ 0.54
VEGFA-221ENST00000520265 CHL1O00533 1208 aa18.43■□□□□ 0.54
VEGFA-221ENST00000520265 ST5P78524 1137 aa18.43■□□□□ 0.54
VEGFA-221ENST00000520265 NBPF5PQ86XG9 351 aaPredicted RBP18.43■□□□□ 0.54
VEGFA-221ENST00000520265 CNBD1Q8NA66 436 aa18.43■□□□□ 0.54
VEGFA-221ENST00000520265 ZBTB3Q9H5J0 574 aa18.43■□□□□ 0.54
VEGFA-221ENST00000520265 NIP7Q9Y221 180 aaKnown RBP eCLIP18.43■□□□□ 0.54
VEGFA-221ENST00000520265 ANXA1P04083 346 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms