RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 INTS5Q6P9B9 1019 aaKnown RBP22.44■■□□□ 1.18
CLK4-204ENST00000520126 MTFR1LQ9H019 292 aa22.44■■□□□ 1.18
CLK4-204ENST00000520126 USP16Q9Y5T5 823 aa22.44■■□□□ 1.18
CLK4-204ENST00000520126 TJP1Q07157 1748 aa22.43■■□□□ 1.18
CLK4-204ENST00000520126 RFC4P35249 363 aa22.43■■□□□ 1.18
CLK4-204ENST00000520126 CALD1Q05682 793 aaKnown RBP22.43■■□□□ 1.18
CLK4-204ENST00000520126 NPM2Q86SE8 214 aaKnown RBP22.43■■□□□ 1.18
CLK4-204ENST00000520126 ZBTB1Q9Y2K1 713 aa22.43■■□□□ 1.18
CLK4-204ENST00000520126 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
CLK4-204ENST00000520126 EIF4A1P60842 406 aaKnown RBP22.42■■□□□ 1.18
CLK4-204ENST00000520126 SLC16A10Q8TF71 515 aa22.42■■□□□ 1.18
CLK4-204ENST00000520126 UBR2Q8IWV8 1755 aa22.42■■□□□ 1.18
CLK4-204ENST00000520126 ZNF831Q5JPB2 1677 aa22.41■■□□□ 1.18
CLK4-204ENST00000520126 A1BGP04217 495 aa22.41■■□□□ 1.18
CLK4-204ENST00000520126 PIP4K2AP48426 406 aaPredicted RBP22.41■■□□□ 1.18
CLK4-204ENST00000520126 ARHGEF1Q92888 912 aaKnown RBP22.41■■□□□ 1.18
CLK4-204ENST00000520126 CASZ1Q86V15 1759 aa22.4■■□□□ 1.18
CLK4-204ENST00000520126 COL5A3P25940 1745 aaPredicted RBP22.4■■□□□ 1.18
CLK4-204ENST00000520126 POLD1P28340 1107 aa22.39■■□□□ 1.18
CLK4-204ENST00000520126 WWC1Q8IX03 1113 aa22.39■■□□□ 1.18
CLK4-204ENST00000520126 CFAP44Q96MT7 982 aa22.39■■□□□ 1.18
CLK4-204ENST00000520126 BABAM1Q9NWV8 329 aa22.39■■□□□ 1.18
CLK4-204ENST00000520126 CHL1O00533 1208 aa22.38■■□□□ 1.17
CLK4-204ENST00000520126 EIF2S2P20042 333 aaKnown RBP22.38■■□□□ 1.17
CLK4-204ENST00000520126 GNAI1P63096 354 aa22.38■■□□□ 1.17
CLK4-204ENST00000520126 KLHL34Q8N239 644 aa22.38■■□□□ 1.17
CLK4-204ENST00000520126 UBR3Q6ZT12 1888 aa22.38■■□□□ 1.17
CLK4-204ENST00000520126 GIGYF1O75420 1035 aaPredicted RBP22.37■■□□□ 1.17
CLK4-204ENST00000520126 NECTIN2Q92692 538 aa22.37■■□□□ 1.17
CLK4-204ENST00000520126 MYH14Q7Z406 1995 aaKnown RBP22.36■■□□□ 1.17
CLK4-204ENST00000520126 ZPR1O75312 459 aa22.36■■□□□ 1.17
CLK4-204ENST00000520126 NGEFQ8N5V2 710 aa22.36■■□□□ 1.17
CLK4-204ENST00000520126 MBIPQ9NS73 344 aa22.36■■□□□ 1.17
CLK4-204ENST00000520126 IFT57Q9NWB7 429 aa22.36■■□□□ 1.17
CLK4-204ENST00000520126 SRP68Q9UHB9 627 aaKnown RBP22.36■■□□□ 1.17
CLK4-204ENST00000520126 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
CLK4-204ENST00000520126 QSER1Q2KHR3 1735 aa22.36■■□□□ 1.17
CLK4-204ENST00000520126 KDM3BQ7LBC6 1761 aa22.36■■□□□ 1.17
CLK4-204ENST00000520126 CCDC27Q2M243 656 aa22.35■■□□□ 1.17
CLK4-204ENST00000520126 KRT24Q2M2I5 525 aa22.35■■□□□ 1.17
CLK4-204ENST00000520126 PTGER2P43116 358 aa22.34■■□□□ 1.17
CLK4-204ENST00000520126 COL15A1P39059 1388 aa22.34■■□□□ 1.17
CLK4-204ENST00000520126 A0A087WZG4 1122 aa22.32■■□□□ 1.16
CLK4-204ENST00000520126 ELL2O00472 640 aaPredicted RBP22.32■■□□□ 1.16
CLK4-204ENST00000520126 MYL6BP14649 208 aa22.32■■□□□ 1.16
CLK4-204ENST00000520126 USPL1Q5W0Q7 1092 aa22.32■■□□□ 1.16
CLK4-204ENST00000520126 TSR2Q969E8 191 aaKnown RBP22.32■■□□□ 1.16
CLK4-204ENST00000520126 TBC1D2BQ9UPU7 963 aa22.32■■□□□ 1.16
CLK4-204ENST00000520126 CICQ96RK0 1608 aaPredicted RBP22.32■■□□□ 1.16
CLK4-204ENST00000520126 ZNF853P0CG23 659 aa22.31■■□□□ 1.16
CLK4-204ENST00000520126 IL6STP40189 918 aaPredicted RBP22.31■■□□□ 1.16
CLK4-204ENST00000520126 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
CLK4-204ENST00000520126 USP42Q9H9J4 1324 aaKnown RBP22.3■■□□□ 1.16
CLK4-204ENST00000520126 GYS1P13807 737 aa22.3■■□□□ 1.16
CLK4-204ENST00000520126 NLGN1Q8N2Q7 840 aa22.3■■□□□ 1.16
CLK4-204ENST00000520126 LRP5O75197 1615 aa22.29■■□□□ 1.16
CLK4-204ENST00000520126 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
CLK4-204ENST00000520126 DUSP27Q5VZP5 1158 aa22.29■■□□□ 1.16
CLK4-204ENST00000520126 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
CLK4-204ENST00000520126 DZIP3Q86Y13 1208 aaKnown RBP22.29■■□□□ 1.16
CLK4-204ENST00000520126 WDR63Q8IWG1 891 aa22.29■■□□□ 1.16
CLK4-204ENST00000520126 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
CLK4-204ENST00000520126 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
CLK4-204ENST00000520126 NARFQ9UHQ1 456 aa22.29■■□□□ 1.16
CLK4-204ENST00000520126 MMP10P09238 476 aa22.28■■□□□ 1.16
CLK4-204ENST00000520126 FKBP8Q14318 412 aa22.28■■□□□ 1.16
CLK4-204ENST00000520126 NCBP3Q53F19 620 aaKnown RBP22.28■■□□□ 1.16
CLK4-204ENST00000520126 BICDL1Q6ZP65 573 aa22.28■■□□□ 1.16
CLK4-204ENST00000520126 SGIP1Q9BQI5 828 aa22.28■■□□□ 1.16
CLK4-204ENST00000520126 ANXA1P04083 346 aa22.27■■□□□ 1.16
CLK4-204ENST00000520126 HDGFL1Q5TGJ6 251 aa22.27■■□□□ 1.16
CLK4-204ENST00000520126 IL16Q14005 1332 aa22.26■■□□□ 1.15
CLK4-204ENST00000520126 PARP3Q9Y6F1 533 aa22.26■■□□□ 1.15
CLK4-204ENST00000520126 C8orf58Q8NAV2 365 aa22.25■■□□□ 1.15
CLK4-204ENST00000520126 FHDC1Q9C0D6 1143 aaPredicted RBP22.25■■□□□ 1.15
CLK4-204ENST00000520126 C4AP0C0L4 1744 aa22.24■■□□□ 1.15
CLK4-204ENST00000520126 LAMB4A4D0S4 1761 aa22.23■■□□□ 1.15
CLK4-204ENST00000520126 GOLGA2Q08379 1002 aa22.23■■□□□ 1.15
CLK4-204ENST00000520126 AIMP1Q12904 312 aaKnown RBP22.23■■□□□ 1.15
CLK4-204ENST00000520126 PROSER3Q2NL68 480 aa22.22■■□□□ 1.15
CLK4-204ENST00000520126 KIF6Q6ZMV9 814 aa22.22■■□□□ 1.15
CLK4-204ENST00000520126 TSPYL6Q8N831 410 aa22.22■■□□□ 1.15
CLK4-204ENST00000520126 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
CLK4-204ENST00000520126 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
CLK4-204ENST00000520126 CHPF2Q9P2E5 772 aa22.22■■□□□ 1.15
CLK4-204ENST00000520126 FANCIQ9NVI1 1328 aa22.21■■□□□ 1.15
CLK4-204ENST00000520126 HOXB7P09629 217 aa22.21■■□□□ 1.15
CLK4-204ENST00000520126 BCL2L12Q9HB09 334 aa22.21■■□□□ 1.15
CLK4-204ENST00000520126 ERBB4Q15303 1308 aa22.2■■□□□ 1.15
CLK4-204ENST00000520126 TCERG1O14776 1098 aaKnown RBP22.2■■□□□ 1.14
CLK4-204ENST00000520126 CAMTA2O94983 1202 aa22.2■■□□□ 1.14
CLK4-204ENST00000520126 TTLL7Q6ZT98 887 aa22.2■■□□□ 1.14
CLK4-204ENST00000520126 ZBTB3Q9H5J0 574 aa22.2■■□□□ 1.14
CLK4-204ENST00000520126 NPHP1O15259 732 aa22.19■■□□□ 1.14
CLK4-204ENST00000520126 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
CLK4-204ENST00000520126 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
CLK4-204ENST00000520126 NFIXQ14938 502 aa22.19■■□□□ 1.14
CLK4-204ENST00000520126 TWISTNBQ3B726 338 aaPredicted RBP22.19■■□□□ 1.14
CLK4-204ENST00000520126 TBC1D9BQ66K14 1250 aa22.19■■□□□ 1.14
CLK4-204ENST00000520126 SYT17Q9BSW7 474 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms