RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TEAD4Q15561 434 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 WDR44Q5JSH3 913 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 SH3PXD2AQ5TCZ1 1133 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 PHLDB3Q6NSJ2 640 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 HOMEZQ8IX15 550 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 STAG2Q8N3U4 1231 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 CABP1Q9NZU7 370 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 EML1O00423 815 aa11.6□□□□□ -0.55
PTPN12-213ENST00000519553 PPP1R12BO60237 982 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-213ENST00000519553 SSFA2P28290 1259 aa11.6□□□□□ -0.55
PTPN12-213ENST00000519553 PHKA2P46019 1235 aa11.6□□□□□ -0.55
PTPN12-213ENST00000519553 PLA2G4AP47712 749 aa11.6□□□□□ -0.55
PTPN12-213ENST00000519553 PDE4CQ08493 712 aa11.6□□□□□ -0.55
PTPN12-213ENST00000519553 C2orf49Q9BVC5 232 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-213ENST00000519553 TRAIPQ9BWF2 469 aa11.6□□□□□ -0.55
PTPN12-213ENST00000519553 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
PTPN12-213ENST00000519553 FOXO3O43524 673 aa11.59□□□□□ -0.55
PTPN12-213ENST00000519553 HIRAP54198 1017 aaPredicted RBP11.59□□□□□ -0.55
PTPN12-213ENST00000519553 NOS2P35228 1153 aa11.58□□□□□ -0.56
PTPN12-213ENST00000519553 L3MBTL2Q969R5 705 aa11.58□□□□□ -0.56
PTPN12-213ENST00000519553 SERTM1A2A2V5 107 aa11.57□□□□□ -0.56
PTPN12-213ENST00000519553 PTSQ03393 145 aa11.57□□□□□ -0.56
PTPN12-213ENST00000519553 C1orf216Q8TAB5 229 aa11.57□□□□□ -0.56
PTPN12-213ENST00000519553 CHMP7Q8WUX9 453 aaPredicted RBP11.57□□□□□ -0.56
PTPN12-213ENST00000519553 SLC35F4A4IF30 521 aa11.55□□□□□ -0.56
PTPN12-213ENST00000519553 SCNN1AP37088 669 aa11.55□□□□□ -0.56
PTPN12-213ENST00000519553 TXLNAP40222 546 aa11.55□□□□□ -0.56
PTPN12-213ENST00000519553 TIMMDC1Q9NPL8 285 aa11.55□□□□□ -0.56
PTPN12-213ENST00000519553 ATP4AP20648 1035 aa11.54□□□□□ -0.56
PTPN12-213ENST00000519553 CAPN12Q6ZSI9 719 aa11.54□□□□□ -0.56
PTPN12-213ENST00000519553 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
PTPN12-213ENST00000519553 DYRK1BQ9Y463 629 aa11.54□□□□□ -0.56
PTPN12-213ENST00000519553 A0A1B0GTH6 734 aa11.53□□□□□ -0.56
PTPN12-213ENST00000519553 ZDHHC3Q9NYG2 299 aa11.53□□□□□ -0.56
PTPN12-213ENST00000519553 CHMP3Q9Y3E7 222 aa11.53□□□□□ -0.56
PTPN12-213ENST00000519553 PDIA4P13667 645 aaKnown RBP11.52□□□□□ -0.57
PTPN12-213ENST00000519553 MKNK1Q9BUB5 465 aa11.52□□□□□ -0.57
PTPN12-213ENST00000519553 BRD1O95696 1058 aa11.51□□□□□ -0.57
PTPN12-213ENST00000519553 MSX1P28360 303 aa11.51□□□□□ -0.57
PTPN12-213ENST00000519553 NBPF1Q3BBV0 1214 aa11.51□□□□□ -0.57
PTPN12-213ENST00000519553 B4GALNT3Q6L9W6 998 aa11.51□□□□□ -0.57
PTPN12-213ENST00000519553 CCDC155Q8N6L0 562 aa11.51□□□□□ -0.57
PTPN12-213ENST00000519553 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
PTPN12-213ENST00000519553 COL26A1Q96A83 441 aa11.51□□□□□ -0.57
PTPN12-213ENST00000519553 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
PTPN12-213ENST00000519553 AIDAQ96BJ3 306 aa11.5□□□□□ -0.57
PTPN12-213ENST00000519553 PHACTR1Q9C0D0 580 aa11.5□□□□□ -0.57
PTPN12-213ENST00000519553 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
PTPN12-213ENST00000519553 HCN4Q9Y3Q4 1203 aa11.5□□□□□ -0.57
PTPN12-213ENST00000519553 ALDH16A1Q8IZ83 802 aa11.49□□□□□ -0.57
PTPN12-213ENST00000519553 C1orf53Q5VUE5 145 aa11.48□□□□□ -0.57
PTPN12-213ENST00000519553 KLRG1Q96E93 195 aa11.48□□□□□ -0.57
PTPN12-213ENST00000519553 GPAMQ9HCL2 828 aa11.48□□□□□ -0.57
PTPN12-213ENST00000519553 SEPT3Q9UH03 358 aa11.48□□□□□ -0.57
PTPN12-213ENST00000519553 PTCD1O75127 700 aaKnown RBP11.47□□□□□ -0.57
PTPN12-213ENST00000519553 F11P03951 625 aa11.47□□□□□ -0.57
PTPN12-213ENST00000519553 THBS1P07996 1170 aa11.47□□□□□ -0.57
PTPN12-213ENST00000519553 VTI1AQ96AJ9 217 aa11.47□□□□□ -0.57
PTPN12-213ENST00000519553 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
PTPN12-213ENST00000519553 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
PTPN12-213ENST00000519553 CUEDC1Q9NWM3 386 aaPredicted RBP11.47□□□□□ -0.57
PTPN12-213ENST00000519553 TATP17735 454 aaPredicted RBP11.46□□□□□ -0.57
PTPN12-213ENST00000519553 MYO19Q96H55 970 aa11.46□□□□□ -0.57
PTPN12-213ENST00000519553 SAP130Q9H0E3 1048 aa11.46□□□□□ -0.57
PTPN12-213ENST00000519553 CRISPLD1Q9H336 500 aa11.46□□□□□ -0.57
PTPN12-213ENST00000519553 PPFIA3O75145 1194 aa11.45□□□□□ -0.58
PTPN12-213ENST00000519553 ITGA6P23229 1130 aa11.45□□□□□ -0.58
PTPN12-213ENST00000519553 RTN1Q16799 776 aa11.45□□□□□ -0.58
PTPN12-213ENST00000519553 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
PTPN12-213ENST00000519553 RUBCNLQ9H714 662 aa11.45□□□□□ -0.58
PTPN12-213ENST00000519553 LRFN2Q9ULH4 789 aa11.45□□□□□ -0.58
PTPN12-213ENST00000519553 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
PTPN12-213ENST00000519553 COX20Q5RI15 118 aa11.44□□□□□ -0.58
PTPN12-213ENST00000519553 ZIC5Q96T25 663 aa11.44□□□□□ -0.58
PTPN12-213ENST00000519553 C16orf46Q6P387 395 aa11.43□□□□□ -0.58
PTPN12-213ENST00000519553 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
PTPN12-213ENST00000519553 GPC6Q9Y625 555 aaPredicted RBP11.43□□□□□ -0.58
PTPN12-213ENST00000519553 RIPOR1Q6ZS17 1223 aa11.42□□□□□ -0.58
PTPN12-213ENST00000519553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPN12-213ENST00000519553 NXF1Q9UBU9 619 aaKnown RBP11.42□□□□□ -0.58
PTPN12-213ENST00000519553 A0A1W2PNR3 127 aa11.41□□□□□ -0.58
PTPN12-213ENST00000519553 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
PTPN12-213ENST00000519553 SERPINB4P48594 390 aa11.41□□□□□ -0.58
PTPN12-213ENST00000519553 KCNA1Q09470 495 aa11.41□□□□□ -0.58
PTPN12-213ENST00000519553 DBN1Q16643 649 aa11.41□□□□□ -0.58
PTPN12-213ENST00000519553 ARSJQ5FYB0 599 aaPredicted RBP11.41□□□□□ -0.58
PTPN12-213ENST00000519553 TRIM22Q8IYM9 498 aa11.41□□□□□ -0.58
PTPN12-213ENST00000519553 ZNF837Q96EG3 531 aaPredicted RBP11.41□□□□□ -0.58
PTPN12-213ENST00000519553 GNEQ9Y223 722 aaKnown RBP11.41□□□□□ -0.58
PTPN12-213ENST00000519553 TNFRSF10BO14763 440 aa11.4□□□□□ -0.58
PTPN12-213ENST00000519553 UBAP2LQ14157 1087 aaKnown RBP11.4□□□□□ -0.58
PTPN12-213ENST00000519553 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.58
PTPN12-213ENST00000519553 HSH2DQ96JZ2 352 aa11.4□□□□□ -0.58
PTPN12-213ENST00000519553 BCS1LQ9Y276 419 aa11.4□□□□□ -0.58
PTPN12-213ENST00000519553 VEGFBP49765 207 aa11.39□□□□□ -0.59
PTPN12-213ENST00000519553 DGKZQ13574 1117 aa11.39□□□□□ -0.59
PTPN12-213ENST00000519553 LBRQ14739 615 aaKnown RBP11.39□□□□□ -0.59
PTPN12-213ENST00000519553 PGBD3Q8N328 593 aa11.39□□□□□ -0.59
PTPN12-213ENST00000519553 GTF3C2Q8WUA4 911 aaPredicted RBP11.39□□□□□ -0.59
PTPN12-213ENST00000519553 KLK14Q9P0G3 267 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms