RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 SBF2Q86WG5 1849 aa11.15□□□□□ -0.62
CDKL3-203ENST00000519312 YY1P25490 414 aa11.15□□□□□ -0.62
CDKL3-203ENST00000519312 PTGDRQ13258 359 aa11.15□□□□□ -0.62
CDKL3-203ENST00000519312 COL18A1P39060 1754 aa11.15□□□□□ -0.62
CDKL3-203ENST00000519312 ABCC6O95255 1503 aa11.14□□□□□ -0.63
CDKL3-203ENST00000519312 NUTM2GQ5VZR2 741 aa11.14□□□□□ -0.63
CDKL3-203ENST00000519312 NYAP1Q6ZVC0 841 aa11.14□□□□□ -0.63
CDKL3-203ENST00000519312 PIK3C2AO00443 1686 aa11.13□□□□□ -0.63
CDKL3-203ENST00000519312 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
CDKL3-203ENST00000519312 CPSF1Q10570 1443 aaKnown RBP11.12□□□□□ -0.63
CDKL3-203ENST00000519312 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
CDKL3-203ENST00000519312 WDR17Q8IZU2 1322 aa11.11□□□□□ -0.63
CDKL3-203ENST00000519312 CENPJQ9HC77 1338 aaPredicted RBP11.11□□□□□ -0.63
CDKL3-203ENST00000519312 TESPA1A2RU30 521 aaPredicted RBP11.11□□□□□ -0.63
CDKL3-203ENST00000519312 PPP4CP60510 307 aa11.11□□□□□ -0.63
CDKL3-203ENST00000519312 IFFO2Q5TF58 517 aa11.11□□□□□ -0.63
CDKL3-203ENST00000519312 PPP1R1BQ9UD71 204 aaPredicted RBP11.11□□□□□ -0.63
CDKL3-203ENST00000519312 TRPM1Q7Z4N2 1603 aa11.1□□□□□ -0.63
CDKL3-203ENST00000519312 DDB1Q16531 1140 aa11.1□□□□□ -0.63
CDKL3-203ENST00000519312 AKAP12Q02952 1782 aa11.1□□□□□ -0.63
CDKL3-203ENST00000519312 RNF40O75150 1001 aa11.09□□□□□ -0.63
CDKL3-203ENST00000519312 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
CDKL3-203ENST00000519312 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
CDKL3-203ENST00000519312 EYA1Q99502 592 aa11.09□□□□□ -0.63
CDKL3-203ENST00000519312 UTRNP46939 3433 aa11.09□□□□□ -0.63
CDKL3-203ENST00000519312 NFAT5O94916 1531 aa11.09□□□□□ -0.63
CDKL3-203ENST00000519312 MYOM1P52179 1685 aa11.08□□□□□ -0.64
CDKL3-203ENST00000519312 NBPF1Q3BBV0 1214 aa11.08□□□□□ -0.64
CDKL3-203ENST00000519312 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
CDKL3-203ENST00000519312 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
CDKL3-203ENST00000519312 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
CDKL3-203ENST00000519312 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
CDKL3-203ENST00000519312 MAP3K5Q99683 1374 aa11.07□□□□□ -0.64
CDKL3-203ENST00000519312 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
CDKL3-203ENST00000519312 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
CDKL3-203ENST00000519312 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
CDKL3-203ENST00000519312 MARCH10Q8NA82 808 aaPredicted RBP11.07□□□□□ -0.64
CDKL3-203ENST00000519312 CARD10Q9BWT7 1032 aa11.07□□□□□ -0.64
CDKL3-203ENST00000519312 NHSQ6T4R5 1651 aa11.07□□□□□ -0.64
CDKL3-203ENST00000519312 CCDC7Q96M83 1385 aa11.06□□□□□ -0.64
CDKL3-203ENST00000519312 TOM1L2Q6ZVM7 507 aa11.06□□□□□ -0.64
CDKL3-203ENST00000519312 KCNH5Q8NCM2 988 aa11.06□□□□□ -0.64
CDKL3-203ENST00000519312 CABP1Q9NZU7 370 aa11.06□□□□□ -0.64
CDKL3-203ENST00000519312 TTC21AQ8NDW8 1320 aa11.06□□□□□ -0.64
CDKL3-203ENST00000519312 FCHSD2O94868 740 aa11.05□□□□□ -0.64
CDKL3-203ENST00000519312 PTF1AQ7RTS3 328 aa11.05□□□□□ -0.64
CDKL3-203ENST00000519312 KCNC4Q03721 635 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 TXNRD1Q16881 649 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 MTFR1LQ9H019 292 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 ADGRG1Q9Y653 693 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 MON2Q7Z3U7 1717 aa11.04□□□□□ -0.64
CDKL3-203ENST00000519312 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
CDKL3-203ENST00000519312 PDGFDQ9GZP0 370 aaPredicted RBP11.03□□□□□ -0.64
CDKL3-203ENST00000519312 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
CDKL3-203ENST00000519312 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
CDKL3-203ENST00000519312 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
CDKL3-203ENST00000519312 RBM46Q8TBY0 533 aaKnown RBP11.02□□□□□ -0.65
CDKL3-203ENST00000519312 STK32BQ9NY57 414 aa11.02□□□□□ -0.65
CDKL3-203ENST00000519312 RGPD5Q99666 1765 aa11.02□□□□□ -0.65
CDKL3-203ENST00000519312 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
CDKL3-203ENST00000519312 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
CDKL3-203ENST00000519312 EXOC5O00471 708 aa11.01□□□□□ -0.65
CDKL3-203ENST00000519312 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
CDKL3-203ENST00000519312 APLP1P51693 650 aa11.01□□□□□ -0.65
CDKL3-203ENST00000519312 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
CDKL3-203ENST00000519312 SYT17Q9BSW7 474 aa11.01□□□□□ -0.65
CDKL3-203ENST00000519312 SLF2Q8IX21 1173 aa11□□□□□ -0.65
CDKL3-203ENST00000519312 FHDC1Q9C0D6 1143 aaPredicted RBP11□□□□□ -0.65
CDKL3-203ENST00000519312 ZBTB7CA1YPR0 619 aa10.99□□□□□ -0.65
CDKL3-203ENST00000519312 DNAJB2P25686 324 aa10.99□□□□□ -0.65
CDKL3-203ENST00000519312 TJAP1Q5JTD0 557 aa10.99□□□□□ -0.65
CDKL3-203ENST00000519312 CHD4Q14839 1912 aa10.98□□□□□ -0.65
CDKL3-203ENST00000519312 RCCD1A6NED2 376 aa10.98□□□□□ -0.65
CDKL3-203ENST00000519312 CSB-PGBD3P0DP91 1061 aa10.98□□□□□ -0.65
CDKL3-203ENST00000519312 HIC1Q14526 733 aa10.98□□□□□ -0.65
CDKL3-203ENST00000519312 KTN1Q86UP2 1357 aaKnown RBP10.98□□□□□ -0.65
CDKL3-203ENST00000519312 CD163L1Q9NR16 1453 aa10.98□□□□□ -0.65
CDKL3-203ENST00000519312 BTAF1O14981 1849 aa10.98□□□□□ -0.65
CDKL3-203ENST00000519312 GPR37O15354 613 aa10.97□□□□□ -0.65
CDKL3-203ENST00000519312 FECHP22830 423 aa10.97□□□□□ -0.65
CDKL3-203ENST00000519312 MTRQ99707 1265 aa10.97□□□□□ -0.65
CDKL3-203ENST00000519312 FAM208AQ9UK61 1670 aaKnown RBP10.97□□□□□ -0.65
CDKL3-203ENST00000519312 SLC16A10Q8TF71 515 aa10.96□□□□□ -0.65
CDKL3-203ENST00000519312 L3MBTL2Q969R5 705 aa10.96□□□□□ -0.65
CDKL3-203ENST00000519312 ARXQ96QS3 562 aa10.96□□□□□ -0.65
CDKL3-203ENST00000519312 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
CDKL3-203ENST00000519312 LTN1O94822 1766 aa10.95□□□□□ -0.66
CDKL3-203ENST00000519312 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
CDKL3-203ENST00000519312 IL2RBP14784 551 aa10.95□□□□□ -0.66
CDKL3-203ENST00000519312 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
CDKL3-203ENST00000519312 SLC27A3Q5K4L6 730 aa10.95□□□□□ -0.66
CDKL3-203ENST00000519312 EDC4Q6P2E9 1401 aaKnown RBP10.94□□□□□ -0.66
CDKL3-203ENST00000519312 GNPATO15228 680 aa10.94□□□□□ -0.66
CDKL3-203ENST00000519312 RGS20O76081 388 aa10.94□□□□□ -0.66
CDKL3-203ENST00000519312 C1QTNF8P60827 252 aa10.94□□□□□ -0.66
CDKL3-203ENST00000519312 ZNF827Q17R98 1081 aa10.94□□□□□ -0.66
CDKL3-203ENST00000519312 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms