RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 KCNC4Q03721 635 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 ECM1Q16610 540 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 CYP2U1Q7Z449 544 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 FBXO33Q7Z6M2 555 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 RGL4Q8IZJ4 473 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 ZNF784Q8NCA9 323 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 CHMP7Q8WUX9 453 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 TSPAN10Q9H1Z9 355 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 ETNK1Q9HBU6 452 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 TLL2Q9Y6L7 1015 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 GRIN2BQ13224 1484 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 SNAPC4Q5SXM2 1469 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 FYCO1Q9BQS8 1478 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 PPP1R12BO60237 982 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-212ENST00000518919 TCF3P15923 654 aa7.08□□□□□ -1.28
CTNNA1-212ENST00000518919 MPSTP25325 297 aa7.08□□□□□ -1.28
CTNNA1-212ENST00000518919 EPHA4P54764 986 aa7.08□□□□□ -1.28
CTNNA1-212ENST00000518919 USP35Q9P2H5 1018 aa7.08□□□□□ -1.28
CTNNA1-212ENST00000518919 ATAD2Q6PL18 1390 aa7.08□□□□□ -1.28
CTNNA1-212ENST00000518919 ERCC6Q03468 1493 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 NDUFB5O43674 189 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 RPIAP49247 311 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 COL19A1Q14993 1142 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 EAPPQ56P03 285 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 RC3H1Q5TC82 1133 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 C16orf46Q6P387 395 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 CCDC116Q8IYX3 515 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 CDK15Q96Q40 435 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 CASKIN1Q8WXD9 1431 aa7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 EIF4G3O43432 1585 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-212ENST00000518919 LRRC9Q6ZRR7 1453 aa7.06□□□□□ -1.28
CTNNA1-212ENST00000518919 NPR3P17342 541 aa7.06□□□□□ -1.28
CTNNA1-212ENST00000518919 VAMP1P23763 118 aa7.06□□□□□ -1.28
CTNNA1-212ENST00000518919 MYT1Q01538 1121 aa7.06□□□□□ -1.28
CTNNA1-212ENST00000518919 TAGLNQ01995 201 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-212ENST00000518919 ESCO1Q5FWF5 840 aa7.06□□□□□ -1.28
CTNNA1-212ENST00000518919 SLC9A9Q8IVB4 645 aa7.06□□□□□ -1.28
CTNNA1-212ENST00000518919 ITGBL1O95965 494 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-212ENST00000518919 ADH1CP00326 375 aa7.05□□□□□ -1.28
CTNNA1-212ENST00000518919 GNRH1P01148 92 aa7.05□□□□□ -1.28
CTNNA1-212ENST00000518919 PPP1R26Q5T8A7 1209 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-212ENST00000518919 RBCK1Q9BYM8 510 aa7.05□□□□□ -1.28
CTNNA1-212ENST00000518919 RAB6BQ9NRW1 208 aa7.05□□□□□ -1.28
CTNNA1-212ENST00000518919 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
CTNNA1-212ENST00000518919 IQGAP2Q13576 1575 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 A0A1W2PRU2 124 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 LILRA1O75019 489 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 GRM5P41594 1212 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 PSMA6P60900 246 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 FOXK2Q01167 660 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 TBCELQ5QJ74 424 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 TMC7Q7Z402 723 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 SLC4A9Q96Q91 983 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 SAP130Q9H0E3 1048 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 ARHGEF10LQ9HCE6 1279 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 PGPEP1Q9NXJ5 209 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 SCHIP1Q9P0W5 487 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 CHMP3Q9Y3E7 222 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 PHLDB1Q86UU1 1377 aa7.04□□□□□ -1.28
CTNNA1-212ENST00000518919 FMN1Q68DA7 1419 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 A6NJY4 79 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 CD2BP2O95400 341 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 RECKO95980 971 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 P4HBP07237 508 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 NR5A1Q13285 461 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 AAMPQ13685 434 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 ALKBH2Q6NS38 261 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 MPNDQ8N594 471 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 C2orf49Q9BVC5 232 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 CCNB3Q8WWL7 1395 aa7.03□□□□□ -1.28
CTNNA1-212ENST00000518919 UGGT2Q9NYU1 1516 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 EIF1AXP47813 144 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 SMTNP53814 917 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 MTFR1Q15390 333 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 TLR1Q15399 786 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 PPP1R18Q6NYC8 613 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 STAG2Q8N3U4 1231 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 NBPF15Q8N660 670 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 STIM2Q9P246 746 aa7.02□□□□□ -1.29
CTNNA1-212ENST00000518919 GRIN2AQ12879 1464 aa7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 MAGI1Q96QZ7 1491 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 TNFRSF10BO14763 440 aa7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 FMR1Q06787 632 aaKnown RBP eCLIP7.01□□□□□ -1.297e-12■□□□□ 8.9
CTNNA1-212ENST00000518919 TSNAXIP1Q2TAA8 658 aa7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 COX20Q5RI15 118 aa7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 ABTB2Q8N961 1025 aa7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 EMILIN1Q9Y6C2 1016 aa7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 LRRIQ1Q96JM4 1722 aa7.01□□□□□ -1.29
CTNNA1-212ENST00000518919 SIAH2O43255 324 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 TREHO43280 583 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 IL2RAP01589 272 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 NR3C2P08235 984 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 ADD1P35611 737 aaKnown RBP7□□□□□ -1.29
CTNNA1-212ENST00000518919 CDAN1Q8IWY9 1227 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 DMRTB1Q96MA1 342 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 CITED4Q96RK1 184 aa7□□□□□ -1.29
CTNNA1-212ENST00000518919 PRKD2Q9BZL6 878 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms