RNA–Protein interactions for RNA: ENST00000518892.1

LARP1-208, Transcript of La ribonucleoprotein domain family member 1, human

TSL 3

Gene LARP1, Length 399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LARP1-208	ENST00000518892	RRP7A	Q9Y3A4	280 aa	Known RBP	28.04	■■■□□ 2.08
LARP1-208	ENST00000518892	ANP32C	O43423	234 aa		28.03	■■■□□ 2.08
LARP1-208	ENST00000518892	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.03	■■■□□ 2.08
LARP1-208	ENST00000518892	PRAMEF22	A3QJZ6	481 aa		28.02	■■■□□ 2.08
LARP1-208	ENST00000518892	GYS1	P13807	737 aa		28.02	■■■□□ 2.08
LARP1-208	ENST00000518892	RFC4	P35249	363 aa		28.02	■■■□□ 2.08
LARP1-208	ENST00000518892	STARD3NL	O95772	234 aa		28.01	■■■□□ 2.07
LARP1-208	ENST00000518892	SRP68	Q9UHB9	627 aa	Known RBP	28.01	■■■□□ 2.07
LARP1-208	ENST00000518892	USP16	Q9Y5T5	823 aa		28.01	■■■□□ 2.07
LARP1-208	ENST00000518892	TRIM35	Q9UPQ4	493 aa		28	■■■□□ 2.07
LARP1-208	ENST00000518892	EIF5	P55010	431 aa	Known RBP	27.99	■■■□□ 2.07
LARP1-208	ENST00000518892	NEUROD2	Q15784	382 aa		27.99	■■■□□ 2.07
LARP1-208	ENST00000518892	PNISR	Q8TF01	805 aa	Known RBP	27.99	■■■□□ 2.07
LARP1-208	ENST00000518892	USP42	Q9H9J4	1324 aa	Known RBP	27.98	■■■□□ 2.07
LARP1-208	ENST00000518892	A1BG	P04217	495 aa		27.98	■■■□□ 2.07
LARP1-208	ENST00000518892	CANX	P27824	592 aa	Known RBP	27.98	■■■□□ 2.07
LARP1-208	ENST00000518892	NLGN1	Q8N2Q7	840 aa		27.98	■■■□□ 2.07
LARP1-208	ENST00000518892	SNRPA1	P09661	255 aa	Known RBP	27.97	■■■□□ 2.07
LARP1-208	ENST00000518892	LMOD3	Q0VAK6	560 aa		27.96	■■■□□ 2.07
LARP1-208	ENST00000518892	COL15A1	P39059	1388 aa		27.96	■■■□□ 2.07
LARP1-208	ENST00000518892	MMP10	P09238	476 aa		27.95	■■■□□ 2.06
LARP1-208	ENST00000518892	EIF4A1	P60842	406 aa	Known RBP	27.95	■■■□□ 2.06
LARP1-208	ENST00000518892	APAF1	O14727	1248 aa		27.94	■■■□□ 2.06
LARP1-208	ENST00000518892	FKBP8	Q14318	412 aa		27.94	■■■□□ 2.06
LARP1-208	ENST00000518892	KLHL34	Q8N239	644 aa		27.94	■■■□□ 2.06
LARP1-208	ENST00000518892	NLGN2	Q8NFZ4	835 aa		27.94	■■■□□ 2.06
LARP1-208	ENST00000518892	NARF	Q9UHQ1	456 aa		27.94	■■■□□ 2.06
LARP1-208	ENST00000518892	BCL2L12	Q9HB09	334 aa		27.93	■■■□□ 2.06
LARP1-208	ENST00000518892	GIGYF1	O75420	1035 aa	Predicted RBP	27.92	■■■□□ 2.06
LARP1-208	ENST00000518892	USPL1	Q5W0Q7	1092 aa		27.92	■■■□□ 2.06
LARP1-208	ENST00000518892	MRS2	Q9HD23	443 aa		27.92	■■■□□ 2.06
LARP1-208	ENST00000518892	CD2AP	Q9Y5K6	639 aa		27.92	■■■□□ 2.06
LARP1-208	ENST00000518892	IL6ST	P40189	918 aa	Predicted RBP	27.91	■■■□□ 2.06
LARP1-208	ENST00000518892	BABAM1	Q9NWV8	329 aa		27.91	■■■□□ 2.06
LARP1-208	ENST00000518892	LAMB4	A4D0S4	1761 aa		27.91	■■■□□ 2.06
LARP1-208	ENST00000518892	TM4SF1	P30408	202 aa		27.9	■■■□□ 2.06
LARP1-208	ENST00000518892	KIF13B	Q9NQT8	1826 aa		27.9	■■■□□ 2.06
LARP1-208	ENST00000518892	NBPF26	B4DH59	902 aa		27.89	■■■□□ 2.06
LARP1-208	ENST00000518892	ZPR1	O75312	459 aa		27.89	■■■□□ 2.06
LARP1-208	ENST00000518892	PIP4K2A	P48426	406 aa	Predicted RBP	27.89	■■■□□ 2.06
LARP1-208	ENST00000518892	NBPF10	Q6P3W6	841 aa	Known RBP	27.89	■■■□□ 2.06
LARP1-208	ENST00000518892	NBPF15	Q8N660	670 aa		27.89	■■■□□ 2.06
LARP1-208	ENST00000518892	TSPYL4	Q9UJ04	414 aa		27.89	■■■□□ 2.06
LARP1-208	ENST00000518892	CHL1	O00533	1208 aa		27.88	■■■□□ 2.05
LARP1-208	ENST00000518892		A0A087WZG4	1122 aa		27.87	■■■□□ 2.05
LARP1-208	ENST00000518892	DDR1	Q08345	913 aa		27.87	■■■□□ 2.05
LARP1-208	ENST00000518892	TBC1D2B	Q9UPU7	963 aa		27.86	■■■□□ 2.05
LARP1-208	ENST00000518892	PARP3	Q9Y6F1	533 aa		27.84	■■■□□ 2.05
LARP1-208	ENST00000518892	KIAA1551	Q9HCM1	1747 aa		27.84	■■■□□ 2.05
LARP1-208	ENST00000518892	AFDN	P55196	1824 aa	Known RBP	27.83	■■■□□ 2.05
LARP1-208	ENST00000518892	POLRMT	O00411	1230 aa	Known RBP	27.83	■■■□□ 2.05
LARP1-208	ENST00000518892	NFIX	Q14938	502 aa		27.83	■■■□□ 2.05
LARP1-208	ENST00000518892	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.83	■■■□□ 2.05
LARP1-208	ENST00000518892	SCN7A	Q01118	1682 aa		27.83	■■■□□ 2.05
LARP1-208	ENST00000518892	CAMTA2	O94983	1202 aa		27.81	■■■□□ 2.04
LARP1-208	ENST00000518892	ZNF853	P0CG23	659 aa		27.81	■■■□□ 2.04
LARP1-208	ENST00000518892	C10orf71	Q711Q0	1435 aa		27.81	■■■□□ 2.04
LARP1-208	ENST00000518892	BCOR	Q6W2J9	1755 aa		27.81	■■■□□ 2.04
LARP1-208	ENST00000518892	NRXN2	Q9P2S2	1712 aa		27.8	■■■□□ 2.04
LARP1-208	ENST00000518892	DCAF8L1	A6NGE4	600 aa		27.79	■■■□□ 2.04
LARP1-208	ENST00000518892	DZIP3	Q86Y13	1208 aa	Known RBP	27.79	■■■□□ 2.04
LARP1-208	ENST00000518892	CFAP44	Q96MT7	982 aa		27.79	■■■□□ 2.04
LARP1-208	ENST00000518892	LAS1L	Q9Y4W2	734 aa	Known RBP	27.79	■■■□□ 2.04
LARP1-208	ENST00000518892	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.78	■■■□□ 2.04
LARP1-208	ENST00000518892	SENP3-EIF4A1	A0A087X0R7	540 aa		27.78	■■■□□ 2.04
LARP1-208	ENST00000518892	KRT24	Q2M2I5	525 aa		27.78	■■■□□ 2.04
LARP1-208	ENST00000518892	TBC1D9B	Q66K14	1250 aa		27.77	■■■□□ 2.04
LARP1-208	ENST00000518892	YBX3	P16989	372 aa	Known RBP eCLIP	27.76	■■■□□ 2.03
LARP1-208	ENST00000518892	GPR162	Q16538	588 aa		27.75	■■■□□ 2.03
LARP1-208	ENST00000518892	MBIP	Q9NS73	344 aa		27.75	■■■□□ 2.03
LARP1-208	ENST00000518892	PXDNL	A1KZ92	1463 aa		27.75	■■■□□ 2.03
LARP1-208	ENST00000518892	TGFB2	P61812	414 aa		27.74	■■■□□ 2.03
LARP1-208	ENST00000518892	PDIA6	Q15084	440 aa		27.74	■■■□□ 2.03
LARP1-208	ENST00000518892	CCDC27	Q2M243	656 aa		27.74	■■■□□ 2.03
LARP1-208	ENST00000518892	NPM2	Q86SE8	214 aa	Known RBP	27.74	■■■□□ 2.03
LARP1-208	ENST00000518892	SERPINB2	P05120	415 aa		27.73	■■■□□ 2.03
LARP1-208	ENST00000518892	NCBP3	Q53F19	620 aa	Known RBP	27.73	■■■□□ 2.03
LARP1-208	ENST00000518892	BICDL1	Q6ZP65	573 aa		27.73	■■■□□ 2.03
LARP1-208	ENST00000518892	LRP10	Q7Z4F1	713 aa		27.73	■■■□□ 2.03
LARP1-208	ENST00000518892	IFT57	Q9NWB7	429 aa		27.73	■■■□□ 2.03
LARP1-208	ENST00000518892	CHD4	Q14839	1912 aa		27.73	■■■□□ 2.03
LARP1-208	ENST00000518892	ERBB4	Q15303	1308 aa		27.72	■■■□□ 2.03
LARP1-208	ENST00000518892	EIF2S2	P20042	333 aa	Known RBP	27.72	■■■□□ 2.03
LARP1-208	ENST00000518892	BRCA1	P38398	1863 aa	Known RBP	27.72	■■■□□ 2.03
LARP1-208	ENST00000518892		A0A0G2JLW4	131 aa		27.71	■■■□□ 2.03
LARP1-208	ENST00000518892	CLEC4G	Q6UXB4	293 aa		27.71	■■■□□ 2.03
LARP1-208	ENST00000518892	WWC1	Q8IX03	1113 aa		27.71	■■■□□ 2.03
LARP1-208	ENST00000518892	NUP98	P52948	1817 aa		27.71	■■■□□ 2.03
LARP1-208	ENST00000518892	RGL2	O15211	777 aa		27.7	■■■□□ 2.02
LARP1-208	ENST00000518892	DPEP1	P16444	411 aa		27.7	■■■□□ 2.02
LARP1-208	ENST00000518892	KCNA3	P22001	575 aa		27.7	■■■□□ 2.02
LARP1-208	ENST00000518892	GNAI1	P63096	354 aa		27.7	■■■□□ 2.02
LARP1-208	ENST00000518892	CALD1	Q05682	793 aa	Known RBP	27.7	■■■□□ 2.02
LARP1-208	ENST00000518892	PELP1	Q8IZL8	1130 aa	Known RBP	27.7	■■■□□ 2.02
LARP1-208	ENST00000518892	FAM9B	Q8IZU0	186 aa		27.7	■■■□□ 2.02
LARP1-208	ENST00000518892	MYL6B	P14649	208 aa		27.69	■■■□□ 2.02
LARP1-208	ENST00000518892	HLF	Q16534	295 aa		27.69	■■■□□ 2.02
LARP1-208	ENST00000518892	PROSER3	Q2NL68	480 aa		27.69	■■■□□ 2.02
LARP1-208	ENST00000518892	TTLL7	Q6ZT98	887 aa		27.69	■■■□□ 2.02
LARP1-208	ENST00000518892	NGEF	Q8N5V2	710 aa		27.69	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms