RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 ARFGEF1Q9Y6D6 1849 aa7.92□□□□□ -1.14
SPIDR-208ENST00000518711 AOC2O75106 756 aa7.92□□□□□ -1.14
SPIDR-208ENST00000518711 RASSF7Q02833 373 aa7.92□□□□□ -1.14
SPIDR-208ENST00000518711 TESK2Q96S53 571 aa7.92□□□□□ -1.14
SPIDR-208ENST00000518711 SPG7Q9UQ90 795 aa7.92□□□□□ -1.14
SPIDR-208ENST00000518711 C4BP0C0L5 1744 aa7.92□□□□□ -1.14
SPIDR-208ENST00000518711 UBR3Q6ZT12 1888 aa7.92□□□□□ -1.14
SPIDR-208ENST00000518711 PHF14O94880 888 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 TMF1P82094 1093 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 TRAPPC3LQ5T215 181 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 FLT4P35916 1363 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 TONSLQ96HA7 1378 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 NCAPD2Q15021 1401 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 KIF13BQ9NQT8 1826 aa7.91□□□□□ -1.14
SPIDR-208ENST00000518711 AMIGO3Q86WK7 504 aa7.9□□□□□ -1.14
SPIDR-208ENST00000518711 CCDC87Q9NVE4 849 aa7.9□□□□□ -1.14
SPIDR-208ENST00000518711 BRCA1P38398 1863 aaKnown RBP7.89□□□□□ -1.15
SPIDR-208ENST00000518711 MAP2P11137 1827 aaKnown RBP7.89□□□□□ -1.15
SPIDR-208ENST00000518711 ERVV-2B6SEH9 535 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 GNPATO15228 680 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 ATP6V1AP38606 617 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
SPIDR-208ENST00000518711 CDCA8Q53HL2 280 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 HSP90AB2PQ58FF8 381 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 LINC00116Q8NCU8 138 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 SIN3AQ96ST3 1273 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 TMOD3Q9NYL9 352 aa7.89□□□□□ -1.15
SPIDR-208ENST00000518711 RTCBQ9Y3I0 505 aaKnown RBP7.89□□□□□ -1.15
SPIDR-208ENST00000518711 WASHC2AQ641Q2 1341 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 CNTNAP4Q9C0A0 1308 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 IQCA1LA6NCM1 817 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 RPS6KA4O75676 772 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 HSP90AB1P08238 724 aaKnown RBP7.88□□□□□ -1.15
SPIDR-208ENST00000518711 RRS1Q15050 365 aaKnown RBP7.88□□□□□ -1.15
SPIDR-208ENST00000518711 IFNL2Q8IZJ0 200 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 CNTROBQ8N137 903 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 CLEC11AQ9Y240 323 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 ZNF831Q5JPB2 1677 aa7.88□□□□□ -1.15
SPIDR-208ENST00000518711 ITGB4P16144 1822 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 TOGARAM1Q9Y4F4 1720 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 ST20-MTHFSA0A0A6YYL1 179 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 GYS1P13807 737 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 FBLN1P23142 703 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 NEUROD1Q13562 356 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 ITPK1Q13572 414 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 EAPPQ56P03 285 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-208ENST00000518711 CTU1Q7Z7A3 348 aaKnown RBP7.87□□□□□ -1.15
SPIDR-208ENST00000518711 ARHGEF1Q92888 912 aaKnown RBP7.87□□□□□ -1.15
SPIDR-208ENST00000518711 TAF1DQ9H5J8 278 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-208ENST00000518711 ATG3Q9NT62 314 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 RAPGEFL1Q9UHV5 662 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 ASAP1Q9ULH1 1129 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 PARP3Q9Y6F1 533 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 RGPD2P0DJD1 1756 aa7.87□□□□□ -1.15
SPIDR-208ENST00000518711 DDNO94850 711 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-208ENST00000518711 SLC4A2P04920 1241 aa7.86□□□□□ -1.15
SPIDR-208ENST00000518711 PHKG2P15735 406 aa7.86□□□□□ -1.15
SPIDR-208ENST00000518711 RFC4P35249 363 aa7.86□□□□□ -1.15
SPIDR-208ENST00000518711 CIAPIN1Q6FI81 312 aa7.86□□□□□ -1.15
SPIDR-208ENST00000518711 USHBP1Q8N6Y0 703 aa7.86□□□□□ -1.15
SPIDR-208ENST00000518711 OTUD5Q96G74 571 aa7.86□□□□□ -1.15
SPIDR-208ENST00000518711 KDRP35968 1356 aa7.85□□□□□ -1.15
SPIDR-208ENST00000518711 MAP1SQ66K74 1059 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-208ENST00000518711 GGNBP2Q9H3C7 697 aa7.85□□□□□ -1.15
SPIDR-208ENST00000518711 DDX21Q9NR30 783 aaKnown RBP eCLIP7.85□□□□□ -1.15
SPIDR-208ENST00000518711 MYCNP04198 464 aaPredicted RBP7.84□□□□□ -1.15
SPIDR-208ENST00000518711 ERFEQ4G0M1 354 aa7.84□□□□□ -1.15
SPIDR-208ENST00000518711 EYA1Q99502 592 aa7.84□□□□□ -1.15
SPIDR-208ENST00000518711 TIAM2Q8IVF5 1701 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 TM4SF1P30408 202 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 CHRNA5P30532 468 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 PKN2Q16513 984 aaKnown RBP7.83□□□□□ -1.16
SPIDR-208ENST00000518711 AMOTQ4VCS5 1084 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.83□□□□□ -1.16
SPIDR-208ENST00000518711 CCDC24Q8N4L8 307 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 SLC4A9Q96Q91 983 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 PDZRN3Q9UPQ7 1066 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 TLL2Q9Y6L7 1015 aa7.83□□□□□ -1.16
SPIDR-208ENST00000518711 C4AP0C0L4 1744 aa7.82□□□□□ -1.16
SPIDR-208ENST00000518711 AKAP4Q5JQC9 854 aa7.82□□□□□ -1.16
SPIDR-208ENST00000518711 CHRDL2Q6WN34 429 aa7.82□□□□□ -1.16
SPIDR-208ENST00000518711 MKI67P46013 3256 aaKnown RBP7.82□□□□□ -1.16
SPIDR-208ENST00000518711 ERBB4Q15303 1308 aa7.81□□□□□ -1.16
SPIDR-208ENST00000518711 USP42Q9H9J4 1324 aaKnown RBP7.81□□□□□ -1.16
SPIDR-208ENST00000518711 PLEKHO1Q53GL0 409 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-208ENST00000518711 L3MBTL3Q96JM7 780 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-208ENST00000518711 CARD14Q9BXL6 1004 aa7.81□□□□□ -1.16
SPIDR-208ENST00000518711 RBM27Q9P2N5 1060 aaKnown RBP7.81□□□□□ -1.16
SPIDR-208ENST00000518711 POLKQ9UBT6 870 aa7.81□□□□□ -1.16
SPIDR-208ENST00000518711 EMILIN1Q9Y6C2 1016 aa7.81□□□□□ -1.16
SPIDR-208ENST00000518711 MYH14Q7Z406 1995 aaKnown RBP7.8□□□□□ -1.16
SPIDR-208ENST00000518711 H0YGN5 161 aa7.8□□□□□ -1.16
SPIDR-208ENST00000518711 NFKBIEO00221 500 aa7.8□□□□□ -1.16
SPIDR-208ENST00000518711 POLRMTO00411 1230 aaKnown RBP7.8□□□□□ -1.16
SPIDR-208ENST00000518711 ATXN8OSP0DMR3 200 aa7.8□□□□□ -1.16
SPIDR-208ENST00000518711 CRKLP46109 303 aaKnown RBP7.8□□□□□ -1.16
SPIDR-208ENST00000518711 CABP4P57796 275 aa7.8□□□□□ -1.16
SPIDR-208ENST00000518711 CST9Q5W186 159 aa7.8□□□□□ -1.16
SPIDR-208ENST00000518711 PNMA8AQ86V59 439 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms