RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 SOS1Q07889 1333 aaPredicted RBP29.68■■■□□ 2.34
NKX6-3-201ENST00000518699 STARD3NLO95772 234 aa29.66■■■□□ 2.34
NKX6-3-201ENST00000518699 ZNF827Q17R98 1081 aa29.66■■■□□ 2.34
NKX6-3-201ENST00000518699 RC3H1Q5TC82 1133 aaKnown RBP29.66■■■□□ 2.34
NKX6-3-201ENST00000518699 TRMT2AQ8IZ69 625 aaKnown RBP29.66■■■□□ 2.34
NKX6-3-201ENST00000518699 CDCA7LQ96GN5 454 aa29.66■■■□□ 2.34
NKX6-3-201ENST00000518699 CRKLP46109 303 aaKnown RBP29.65■■■□□ 2.34
NKX6-3-201ENST00000518699 NBPF14Q5TI25 921 aa29.64■■■□□ 2.34
NKX6-3-201ENST00000518699 STK32BQ9NY57 414 aa29.64■■■□□ 2.34
NKX6-3-201ENST00000518699 USP16Q9Y5T5 823 aa29.64■■■□□ 2.34
NKX6-3-201ENST00000518699 C4AP0C0L4 1744 aa29.64■■■□□ 2.33
NKX6-3-201ENST00000518699 DUSP27Q5VZP5 1158 aa29.64■■■□□ 2.33
NKX6-3-201ENST00000518699 AK7Q96M32 723 aa29.64■■■□□ 2.33
NKX6-3-201ENST00000518699 CCDC87Q9NVE4 849 aa29.64■■■□□ 2.33
NKX6-3-201ENST00000518699 SLC15A2Q16348 729 aa29.63■■■□□ 2.33
NKX6-3-201ENST00000518699 C8orf58Q8NAV2 365 aa29.63■■■□□ 2.33
NKX6-3-201ENST00000518699 INTS5Q6P9B9 1019 aaKnown RBP29.62■■■□□ 2.33
NKX6-3-201ENST00000518699 ERBB4Q15303 1308 aa29.61■■■□□ 2.33
NKX6-3-201ENST00000518699 CASZ1Q86V15 1759 aa29.6■■■□□ 2.33
NKX6-3-201ENST00000518699 EXOSC9Q06265 439 aaKnown RBP29.6■■■□□ 2.33
NKX6-3-201ENST00000518699 ZBTB1Q9Y2K1 713 aa29.6■■■□□ 2.33
NKX6-3-201ENST00000518699 GNPATO15228 680 aa29.59■■■□□ 2.33
NKX6-3-201ENST00000518699 TWISTNBQ3B726 338 aaPredicted RBP29.59■■■□□ 2.33
NKX6-3-201ENST00000518699 TSPYL6Q8N831 410 aa29.59■■■□□ 2.33
NKX6-3-201ENST00000518699 RPS6KA4O75676 772 aa29.57■■■□□ 2.32
NKX6-3-201ENST00000518699 SSFA2P28290 1259 aa29.56■■■□□ 2.32
NKX6-3-201ENST00000518699 HDGFL1Q5TGJ6 251 aa29.56■■■□□ 2.32
NKX6-3-201ENST00000518699 TFCP2L1Q9NZI6 479 aa29.56■■■□□ 2.32
NKX6-3-201ENST00000518699 CACNA1FO60840 1977 aa29.56■■■□□ 2.32
NKX6-3-201ENST00000518699 ELL2O00472 640 aaPredicted RBP29.55■■■□□ 2.32
NKX6-3-201ENST00000518699 A1BGP04217 495 aa29.55■■■□□ 2.32
NKX6-3-201ENST00000518699 RTCBQ9Y3I0 505 aaKnown RBP29.55■■■□□ 2.32
NKX6-3-201ENST00000518699 PNPLA7Q6ZV29 1317 aa29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 ADRA2BP18089 450 aa29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 EIF2S2P20042 333 aaKnown RBP29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 IL6STP40189 918 aaPredicted RBP29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 AMIGO3Q86WK7 504 aa29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 YTHDC1Q96MU7 727 aaKnown RBP29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 CHMP4AQ9BY43 222 aa29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 SCN7AQ01118 1682 aa29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 COL15A1P39059 1388 aa29.54■■■□□ 2.32
NKX6-3-201ENST00000518699 NBPF26B4DH59 902 aa29.53■■■□□ 2.32
NKX6-3-201ENST00000518699 NBPF10Q6P3W6 841 aaKnown RBP29.53■■■□□ 2.32
NKX6-3-201ENST00000518699 NBPF15Q8N660 670 aa29.53■■■□□ 2.32
NKX6-3-201ENST00000518699 BCORQ6W2J9 1755 aa29.53■■■□□ 2.32
NKX6-3-201ENST00000518699 FLAD1Q8NFF5 587 aa29.52■■■□□ 2.32
NKX6-3-201ENST00000518699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.52■■■□□ 2.32
NKX6-3-201ENST00000518699 VAMP4O75379 141 aa29.52■■■□□ 2.32
NKX6-3-201ENST00000518699 CANXP27824 592 aaKnown RBP29.52■■■□□ 2.32
NKX6-3-201ENST00000518699 EIF5P55010 431 aaKnown RBP29.52■■■□□ 2.32
NKX6-3-201ENST00000518699 PDIA6Q15084 440 aa29.51■■■□□ 2.31
NKX6-3-201ENST00000518699 R3HDM1Q15032 1099 aaKnown RBP29.5■■■□□ 2.31
NKX6-3-201ENST00000518699 CCDC30Q5VVM6 783 aa29.5■■■□□ 2.31
NKX6-3-201ENST00000518699 CT47B1P0C2W7 299 aaPredicted RBP29.49■■■□□ 2.31
NKX6-3-201ENST00000518699 PIP4K2AP48426 406 aaPredicted RBP29.49■■■□□ 2.31
NKX6-3-201ENST00000518699 LRP10Q7Z4F1 713 aa29.49■■■□□ 2.31
NKX6-3-201ENST00000518699 NECTIN2Q92692 538 aa29.49■■■□□ 2.31
NKX6-3-201ENST00000518699 DDX21Q9NR30 783 aaKnown RBP eCLIP29.49■■■□□ 2.31
NKX6-3-201ENST00000518699 CHPF2Q9P2E5 772 aa29.49■■■□□ 2.31
NKX6-3-201ENST00000518699 DBF4Q9UBU7 674 aaPredicted RBP29.49■■■□□ 2.31
NKX6-3-201ENST00000518699 PHF14O94880 888 aa29.48■■■□□ 2.31
NKX6-3-201ENST00000518699 COL24A1Q17RW2 1714 aa29.46■■■□□ 2.31
NKX6-3-201ENST00000518699 PROSER3Q2NL68 480 aa29.46■■■□□ 2.31
NKX6-3-201ENST00000518699 TRAPPC3LQ5T215 181 aa29.46■■■□□ 2.31
NKX6-3-201ENST00000518699 COL23A1Q86Y22 540 aaPredicted RBP29.46■■■□□ 2.31
NKX6-3-201ENST00000518699 ZNF428Q96B54 188 aa29.46■■■□□ 2.31
NKX6-3-201ENST00000518699 SMIM5Q71RC9 77 aa29.45■■■□□ 2.31
NKX6-3-201ENST00000518699 ARHGEF1Q92888 912 aaKnown RBP29.45■■■□□ 2.31
NKX6-3-201ENST00000518699 A0A087WZG4 1122 aa29.44■■■□□ 2.3
NKX6-3-201ENST00000518699 PSDA5PKW4 1024 aaPredicted RBP29.44■■■□□ 2.3
NKX6-3-201ENST00000518699 MYL6BP14649 208 aa29.44■■■□□ 2.3
NKX6-3-201ENST00000518699 STK31Q9BXU1 1019 aa29.43■■■□□ 2.3
NKX6-3-201ENST00000518699 USP42Q9H9J4 1324 aaKnown RBP29.43■■■□□ 2.3
NKX6-3-201ENST00000518699 ANXA1P04083 346 aa29.42■■■□□ 2.3
NKX6-3-201ENST00000518699 NPM2Q86SE8 214 aaKnown RBP29.42■■■□□ 2.3
NKX6-3-201ENST00000518699 HYPKQ9NX55 129 aa29.42■■■□□ 2.3
NKX6-3-201ENST00000518699 ZNF330Q9Y3S2 320 aaPredicted RBP29.42■■■□□ 2.3
NKX6-3-201ENST00000518699 RFC4P35249 363 aa29.4■■■□□ 2.3
NKX6-3-201ENST00000518699 PDGFDQ9GZP0 370 aaPredicted RBP29.4■■■□□ 2.3
NKX6-3-201ENST00000518699 NARFQ9UHQ1 456 aa29.4■■■□□ 2.3
NKX6-3-201ENST00000518699 SLC16A10Q8TF71 515 aa29.39■■■□□ 2.3
NKX6-3-201ENST00000518699 ARFGEF2Q9Y6D5 1785 aa29.39■■■□□ 2.3
NKX6-3-201ENST00000518699 DZIP3Q86Y13 1208 aaKnown RBP29.39■■■□□ 2.29
NKX6-3-201ENST00000518699 NUP98P52948 1817 aa29.38■■■□□ 2.29
NKX6-3-201ENST00000518699 RGL2O15211 777 aa29.38■■■□□ 2.29
NKX6-3-201ENST00000518699 ALDH1L2Q3SY69 923 aa29.38■■■□□ 2.29
NKX6-3-201ENST00000518699 ANKRD36CQ5JPF3 1778 aa29.37■■■□□ 2.29
NKX6-3-201ENST00000518699 TCERG1O14776 1098 aaKnown RBP29.37■■■□□ 2.29
NKX6-3-201ENST00000518699 MSH5O43196 834 aa29.36■■■□□ 2.29
NKX6-3-201ENST00000518699 CAMTA2O94983 1202 aa29.36■■■□□ 2.29
NKX6-3-201ENST00000518699 XAGE3Q8WTP9 111 aa29.36■■■□□ 2.29
NKX6-3-201ENST00000518699 SRP68Q9UHB9 627 aaKnown RBP29.36■■■□□ 2.29
NKX6-3-201ENST00000518699 TBC1D2BQ9UPU7 963 aa29.36■■■□□ 2.29
NKX6-3-201ENST00000518699 ZPR1O75312 459 aa29.35■■■□□ 2.29
NKX6-3-201ENST00000518699 SLC4A2P04920 1241 aa29.35■■■□□ 2.29
NKX6-3-201ENST00000518699 KIF6Q6ZMV9 814 aa29.35■■■□□ 2.29
NKX6-3-201ENST00000518699 TTLL7Q6ZT98 887 aa29.35■■■□□ 2.29
NKX6-3-201ENST00000518699 MAP3K15Q6ZN16 1313 aa29.35■■■□□ 2.29
NKX6-3-201ENST00000518699 GYS1P13807 737 aa29.34■■■□□ 2.29
NKX6-3-201ENST00000518699 COPS6Q7L5N1 327 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms