RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
TRIM55-205ENST00000517647 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
TRIM55-205ENST00000517647 DLG5Q8TDM6 1919 aa14.53□□□□□ -0.08
TRIM55-205ENST00000517647 BTBD11A6QL63 1104 aa14.52□□□□□ -0.09
TRIM55-205ENST00000517647 DNAJC10Q8IXB1 793 aa14.52□□□□□ -0.09
TRIM55-205ENST00000517647 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.09
TRIM55-205ENST00000517647 ARHGEF1Q92888 912 aaKnown RBP14.52□□□□□ -0.09
TRIM55-205ENST00000517647 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.09
TRIM55-205ENST00000517647 SYT17Q9BSW7 474 aa14.52□□□□□ -0.09
TRIM55-205ENST00000517647 CCDC87Q9NVE4 849 aa14.52□□□□□ -0.09
TRIM55-205ENST00000517647 SOS1Q07889 1333 aaPredicted RBP14.51□□□□□ -0.09
TRIM55-205ENST00000517647 STARD3NLO95772 234 aa14.51□□□□□ -0.09
TRIM55-205ENST00000517647 LMOD3Q0VAK6 560 aa14.51□□□□□ -0.09
TRIM55-205ENST00000517647 MCM10Q7L590 875 aa14.51□□□□□ -0.09
TRIM55-205ENST00000517647 RUNDC1Q96C34 613 aa14.51□□□□□ -0.09
TRIM55-205ENST00000517647 TMPOP42166 694 aaKnown RBP14.5□□□□□ -0.09
TRIM55-205ENST00000517647 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
TRIM55-205ENST00000517647 FHDC1Q9C0D6 1143 aaPredicted RBP14.5□□□□□ -0.09
TRIM55-205ENST00000517647 USP42Q9H9J4 1324 aaKnown RBP14.49□□□□□ -0.09
TRIM55-205ENST00000517647 PHF14O94880 888 aa14.49□□□□□ -0.09
TRIM55-205ENST00000517647 GYS1P13807 737 aa14.49□□□□□ -0.09
TRIM55-205ENST00000517647 ADAMTS8Q9UP79 889 aa14.49□□□□□ -0.09
TRIM55-205ENST00000517647 CD2APQ9Y5K6 639 aa14.49□□□□□ -0.09
TRIM55-205ENST00000517647 RGL2O15211 777 aa14.48□□□□□ -0.09
TRIM55-205ENST00000517647 RFC4P35249 363 aa14.48□□□□□ -0.09
TRIM55-205ENST00000517647 EIF5P55010 431 aaKnown RBP14.48□□□□□ -0.09
TRIM55-205ENST00000517647 DCTN1Q14203 1278 aa14.48□□□□□ -0.09
TRIM55-205ENST00000517647 C4AP0C0L4 1744 aa14.48□□□□□ -0.09
TRIM55-205ENST00000517647 CCER2I3L3R5 266 aa14.47□□□□□ -0.09
TRIM55-205ENST00000517647 SNRPA1P09661 255 aaKnown RBP14.47□□□□□ -0.09
TRIM55-205ENST00000517647 IL6STP40189 918 aaPredicted RBP14.47□□□□□ -0.09
TRIM55-205ENST00000517647 RIPK4P57078 832 aa14.47□□□□□ -0.09
TRIM55-205ENST00000517647 A0A087WZG4 1122 aa14.46□□□□□ -0.09
TRIM55-205ENST00000517647 ANP32CO43423 234 aa14.46□□□□□ -0.09
TRIM55-205ENST00000517647 KCNQ3O43525 872 aa14.46□□□□□ -0.09
TRIM55-205ENST00000517647 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
TRIM55-205ENST00000517647 NARFQ9UHQ1 456 aa14.46□□□□□ -0.09
TRIM55-205ENST00000517647 ZBTB1Q9Y2K1 713 aa14.46□□□□□ -0.09
TRIM55-205ENST00000517647 KDM3BQ7LBC6 1761 aa14.46□□□□□ -0.09
TRIM55-205ENST00000517647 COL15A1P39059 1388 aa14.46□□□□□ -0.1
TRIM55-205ENST00000517647 MSL1Q68DK7 614 aa14.45□□□□□ -0.1
TRIM55-205ENST00000517647 TM4SF1P30408 202 aa14.44□□□□□ -0.1
TRIM55-205ENST00000517647 EIF4A1P60842 406 aaKnown RBP14.44□□□□□ -0.1
TRIM55-205ENST00000517647 KIF13BQ9NQT8 1826 aa14.43□□□□□ -0.1
TRIM55-205ENST00000517647 GIGYF1O75420 1035 aaPredicted RBP14.43□□□□□ -0.1
TRIM55-205ENST00000517647 MMP10P09238 476 aa14.43□□□□□ -0.1
TRIM55-205ENST00000517647 TRIM35Q9UPQ4 493 aa14.43□□□□□ -0.1
TRIM55-205ENST00000517647 USP16Q9Y5T5 823 aa14.43□□□□□ -0.1
TRIM55-205ENST00000517647 CHL1O00533 1208 aa14.42□□□□□ -0.1
TRIM55-205ENST00000517647 ZPR1O75312 459 aa14.42□□□□□ -0.1
TRIM55-205ENST00000517647 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
TRIM55-205ENST00000517647 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
TRIM55-205ENST00000517647 TGFB2P61812 414 aa14.41□□□□□ -0.1
TRIM55-205ENST00000517647 LAMB4A4D0S4 1761 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 A1BGP04217 495 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 FKBP8Q14318 412 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 CCDC27Q2M243 656 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 CLEC4GQ6UXB4 293 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 CCDC146Q8IYE0 955 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 THUMPD2Q9BTF0 503 aaKnown RBP14.4□□□□□ -0.1
TRIM55-205ENST00000517647 BCL2L12Q9HB09 334 aa14.4□□□□□ -0.1
TRIM55-205ENST00000517647 SRP68Q9UHB9 627 aaKnown RBP14.4□□□□□ -0.1
TRIM55-205ENST00000517647 NRXN2Q9P2S2 1712 aa14.39□□□□□ -0.11
TRIM55-205ENST00000517647 POLRMTO00411 1230 aaKnown RBP14.39□□□□□ -0.11
TRIM55-205ENST00000517647 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
TRIM55-205ENST00000517647 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
TRIM55-205ENST00000517647 CALD1Q05682 793 aaKnown RBP14.39□□□□□ -0.11
TRIM55-205ENST00000517647 CCDC184Q52MB2 194 aa14.39□□□□□ -0.11
TRIM55-205ENST00000517647 USPL1Q5W0Q7 1092 aa14.39□□□□□ -0.11
TRIM55-205ENST00000517647 TSPYL4Q9UJ04 414 aa14.39□□□□□ -0.11
TRIM55-205ENST00000517647 PARP3Q9Y6F1 533 aa14.39□□□□□ -0.11
TRIM55-205ENST00000517647 HOXB7P09629 217 aa14.38□□□□□ -0.11
TRIM55-205ENST00000517647 ZNF853P0CG23 659 aa14.38□□□□□ -0.11
TRIM55-205ENST00000517647 NLGN2Q8NFZ4 835 aa14.38□□□□□ -0.11
TRIM55-205ENST00000517647 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
TRIM55-205ENST00000517647 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
TRIM55-205ENST00000517647 SCN7AQ01118 1682 aa14.38□□□□□ -0.11
TRIM55-205ENST00000517647 PRAMEF22A3QJZ6 481 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 NBPF26B4DH59 902 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 APAF1O14727 1248 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 CAMTA2O94983 1202 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 DDR1Q08345 913 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 POLA2Q14181 598 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 NFIXQ14938 502 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 NBPF10Q6P3W6 841 aaKnown RBP14.37□□□□□ -0.11
TRIM55-205ENST00000517647 NGEFQ8N5V2 710 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
TRIM55-205ENST00000517647 GRIN3BO60391 1043 aa14.36□□□□□ -0.11
TRIM55-205ENST00000517647 NPM2Q86SE8 214 aaKnown RBP14.36□□□□□ -0.11
TRIM55-205ENST00000517647 MRS2Q9HD23 443 aa14.36□□□□□ -0.11
TRIM55-205ENST00000517647 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
TRIM55-205ENST00000517647 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
TRIM55-205ENST00000517647 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
TRIM55-205ENST00000517647 UTRNP46939 3433 aa14.35□□□□□ -0.11
TRIM55-205ENST00000517647 ERVV-1B6SEH8 477 aa14.35□□□□□ -0.11
TRIM55-205ENST00000517647 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
TRIM55-205ENST00000517647 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
TRIM55-205ENST00000517647 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
TRIM55-205ENST00000517647 GTF3C3Q9Y5Q9 886 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms