RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.57
PDGFRB-202ENST00000517488 GOLGB1Q14789 3259 aaKnown RBP18.63■□□□□ 0.57
PDGFRB-202ENST00000517488 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
PDGFRB-202ENST00000517488 FKBP8Q14318 412 aa18.63■□□□□ 0.57
PDGFRB-202ENST00000517488 WDR43Q15061 677 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDGFRB-202ENST00000517488 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
PDGFRB-202ENST00000517488 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
PDGFRB-202ENST00000517488 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
PDGFRB-202ENST00000517488 SIPA1L3O60292 1781 aaPredicted RBP18.62■□□□□ 0.57
PDGFRB-202ENST00000517488 UBR2Q8IWV8 1755 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 COL15A1P39059 1388 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 ZPR1O75312 459 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 A1BGP04217 495 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 RIPK4P57078 832 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 GPR162Q16538 588 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 USP16Q9Y5T5 823 aa18.61■□□□□ 0.57
PDGFRB-202ENST00000517488 EIF5P55010 431 aaKnown RBP18.6■□□□□ 0.57
PDGFRB-202ENST00000517488 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
PDGFRB-202ENST00000517488 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
PDGFRB-202ENST00000517488 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
PDGFRB-202ENST00000517488 DDR1Q08345 913 aa18.59■□□□□ 0.57
PDGFRB-202ENST00000517488 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
PDGFRB-202ENST00000517488 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.56
PDGFRB-202ENST00000517488 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
PDGFRB-202ENST00000517488 BCL2L12Q9HB09 334 aa18.58■□□□□ 0.56
PDGFRB-202ENST00000517488 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.56
PDGFRB-202ENST00000517488 YBX3P16989 372 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDGFRB-202ENST00000517488 TM4SF1P30408 202 aa18.57■□□□□ 0.56
PDGFRB-202ENST00000517488 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
PDGFRB-202ENST00000517488 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
PDGFRB-202ENST00000517488 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
PDGFRB-202ENST00000517488 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
PDGFRB-202ENST00000517488 YY1P25490 414 aa18.56■□□□□ 0.56
PDGFRB-202ENST00000517488 IL6STP40189 918 aaPredicted RBP18.56■□□□□ 0.56
PDGFRB-202ENST00000517488 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
PDGFRB-202ENST00000517488 A0A087WZG4 1122 aa18.55■□□□□ 0.56
PDGFRB-202ENST00000517488 POLRMTO00411 1230 aaKnown RBP18.55■□□□□ 0.56
PDGFRB-202ENST00000517488 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
PDGFRB-202ENST00000517488 NFIXQ14938 502 aa18.55■□□□□ 0.56
PDGFRB-202ENST00000517488 WWC3Q9ULE0 1092 aa18.55■□□□□ 0.56
PDGFRB-202ENST00000517488 TBC1D2BQ9UPU7 963 aa18.55■□□□□ 0.56
PDGFRB-202ENST00000517488 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
PDGFRB-202ENST00000517488 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
PDGFRB-202ENST00000517488 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
PDGFRB-202ENST00000517488 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
PDGFRB-202ENST00000517488 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
PDGFRB-202ENST00000517488 C10orf71Q711Q0 1435 aa18.53■□□□□ 0.56
PDGFRB-202ENST00000517488 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
PDGFRB-202ENST00000517488 A0A0G2JLW4 131 aa18.52■□□□□ 0.56
PDGFRB-202ENST00000517488 TSPYL4Q9UJ04 414 aa18.52■□□□□ 0.56
PDGFRB-202ENST00000517488 DLG5Q8TDM6 1919 aa18.52■□□□□ 0.56
PDGFRB-202ENST00000517488 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
PDGFRB-202ENST00000517488 TGFB2P61812 414 aa18.51■□□□□ 0.55
PDGFRB-202ENST00000517488 ANP32CO43423 234 aa18.5■□□□□ 0.55
PDGFRB-202ENST00000517488 GRIN3BO60391 1043 aa18.5■□□□□ 0.55
PDGFRB-202ENST00000517488 DPEP1P16444 411 aa18.5■□□□□ 0.55
PDGFRB-202ENST00000517488 BICDL1Q6ZP65 573 aa18.5■□□□□ 0.55
PDGFRB-202ENST00000517488 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
PDGFRB-202ENST00000517488 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
PDGFRB-202ENST00000517488 APAF1O14727 1248 aa18.49■□□□□ 0.55
PDGFRB-202ENST00000517488 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
PDGFRB-202ENST00000517488 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
PDGFRB-202ENST00000517488 BABAM1Q9NWV8 329 aa18.49■□□□□ 0.55
PDGFRB-202ENST00000517488 SERPINB2P05120 415 aa18.48■□□□□ 0.55
PDGFRB-202ENST00000517488 CHL1O00533 1208 aa18.47■□□□□ 0.55
PDGFRB-202ENST00000517488 KCNA3P22001 575 aa18.47■□□□□ 0.55
PDGFRB-202ENST00000517488 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
PDGFRB-202ENST00000517488 CHRNA5P30532 468 aa18.45■□□□□ 0.54
PDGFRB-202ENST00000517488 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
PDGFRB-202ENST00000517488 MRS2Q9HD23 443 aa18.45■□□□□ 0.54
PDGFRB-202ENST00000517488 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
PDGFRB-202ENST00000517488 MYL6BP14649 208 aa18.43■□□□□ 0.54
PDGFRB-202ENST00000517488 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
PDGFRB-202ENST00000517488 KRT24Q2M2I5 525 aa18.43■□□□□ 0.54
PDGFRB-202ENST00000517488 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
PDGFRB-202ENST00000517488 BCS1LQ9Y276 419 aa18.43■□□□□ 0.54
PDGFRB-202ENST00000517488 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
PDGFRB-202ENST00000517488 SENP3-EIF4A1A0A087X0R7 540 aa18.42■□□□□ 0.54
PDGFRB-202ENST00000517488 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
PDGFRB-202ENST00000517488 CCDC24Q8N4L8 307 aa18.42■□□□□ 0.54
PDGFRB-202ENST00000517488 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
PDGFRB-202ENST00000517488 HLFQ16534 295 aa18.41■□□□□ 0.54
PDGFRB-202ENST00000517488 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
PDGFRB-202ENST00000517488 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
PDGFRB-202ENST00000517488 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
PDGFRB-202ENST00000517488 PIM2Q9P1W9 311 aa18.41■□□□□ 0.54
PDGFRB-202ENST00000517488 KIAA1551Q9HCM1 1747 aa18.4■□□□□ 0.54
PDGFRB-202ENST00000517488 PDIA6Q15084 440 aa18.4■□□□□ 0.54
PDGFRB-202ENST00000517488 PROSER3Q2NL68 480 aa18.4■□□□□ 0.54
PDGFRB-202ENST00000517488 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
PDGFRB-202ENST00000517488 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
PDGFRB-202ENST00000517488 ZNF652Q9Y2D9 606 aa18.4■□□□□ 0.54
PDGFRB-202ENST00000517488 SCN7AQ01118 1682 aa18.4■□□□□ 0.54
PDGFRB-202ENST00000517488 ANXA1P04083 346 aa18.39■□□□□ 0.53
PDGFRB-202ENST00000517488 ZNF853P0CG23 659 aa18.39■□□□□ 0.53
PDGFRB-202ENST00000517488 DALRD3Q5D0E6 543 aaKnown RBP18.39■□□□□ 0.53
PDGFRB-202ENST00000517488 LRP10Q7Z4F1 713 aa18.39■□□□□ 0.53
PDGFRB-202ENST00000517488 MBIPQ9NS73 344 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms