RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ALAS2P22557 587 aa2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 MLLT3P42568 568 aaPredicted RBP2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 RAP1GAPP47736 663 aa2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 LBRQ14739 615 aaKnown RBP2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 ERFEQ4G0M1 354 aa2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 ZNF468Q5VIY5 522 aaPredicted RBP2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 PRR7Q8TB68 274 aa2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 ANGEL1Q9UNK9 670 aaKnown RBP2.33□□□□□ -2.04
RNU6-539P-201ENST00000516665 SPATA31C2B4DYI2 1134 aa2.32□□□□□ -2.04
RNU6-539P-201ENST00000516665 F12P00748 615 aaPredicted RBP2.32□□□□□ -2.04
RNU6-539P-201ENST00000516665 RAC1P63000 192 aa2.32□□□□□ -2.04
RNU6-539P-201ENST00000516665 WDR44Q5JSH3 913 aa2.32□□□□□ -2.04
RNU6-539P-201ENST00000516665 SH3BP5LQ7L8J4 393 aa2.32□□□□□ -2.04
RNU6-539P-201ENST00000516665 TAS1R3Q7RTX0 852 aa2.32□□□□□ -2.04
RNU6-539P-201ENST00000516665 HOXA10P31260 410 aaPredicted RBP2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 EFHC2Q5JST6 749 aa2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 PRRT2Q7Z6L0 340 aaPredicted RBP2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 TP53INP2Q8IXH6 220 aa2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 DZIP1LQ8IYY4 767 aaKnown RBP2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 FMR1NBQ8N0W7 255 aaPredicted RBP2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 ZIC5Q96T25 663 aa2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 GRIP2Q9C0E4 1043 aa2.31□□□□□ -2.04
RNU6-539P-201ENST00000516665 CSB-PGBD3P0DP91 1061 aa2.3□□□□□ -2.04
RNU6-539P-201ENST00000516665 PGBD3Q8N328 593 aa2.3□□□□□ -2.04
RNU6-539P-201ENST00000516665 BHLHE22Q8NFJ8 381 aaPredicted RBP2.3□□□□□ -2.04
RNU6-539P-201ENST00000516665 FAM84AQ96KN4 292 aa2.3□□□□□ -2.04
RNU6-539P-201ENST00000516665 MENTQ9BUN1 341 aa2.3□□□□□ -2.04
RNU6-539P-201ENST00000516665 RAXQ9Y2V3 346 aa2.3□□□□□ -2.04
RNU6-539P-201ENST00000516665 DCDC2BA2VCK2 349 aa2.29□□□□□ -2.04
RNU6-539P-201ENST00000516665 PHKA2P46019 1235 aa2.29□□□□□ -2.04
RNU6-539P-201ENST00000516665 E2F4Q16254 413 aa2.29□□□□□ -2.04
RNU6-539P-201ENST00000516665 DESI1Q6ICB0 168 aa2.29□□□□□ -2.04
RNU6-539P-201ENST00000516665 BORCS6Q96GS4 357 aa2.29□□□□□ -2.04
RNU6-539P-201ENST00000516665 CCDC39Q9UFE4 941 aa2.29□□□□□ -2.04
RNU6-539P-201ENST00000516665 A0A1B0GTH6 734 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 FDX1P10109 184 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 SYN1P17600 705 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 RAB15P59190 212 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 NFIAQ12857 509 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 FAM182BQ5T319 152 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 LYPD8Q6UX82 237 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 C20orf204Q6ZNR8 217 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 PRR12Q9ULL5 1215 aa2.28□□□□□ -2.04
RNU6-539P-201ENST00000516665 A0A0G2JLL6 359 aaPredicted RBP2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 A0A1W2PRU2 124 aa2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 TSPAN15O95858 294 aa2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 ADRB1P08588 477 aa2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 MAPTP10636 758 aaKnown RBP2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 ZXDCQ2QGD7 858 aaPredicted RBP2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 SKOR2Q2VWA4 1001 aaPredicted RBP2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 DNAAF2Q9NVR5 837 aaKnown RBP2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 STOML1Q9UBI4 398 aa2.27□□□□□ -2.05
RNU6-539P-201ENST00000516665 ALX3O95076 343 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 MSX1P28360 303 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 SYT9Q86SS6 491 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 AMIGO3Q86WK7 504 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 FAM168AQ92567 244 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 SLC10A4Q96EP9 437 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 FBXL18Q96ME1 805 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 ZCCHC2Q9C0B9 1178 aaKnown RBP2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 CYLDQ9NQC7 956 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 PCDHGC4Q9Y5F7 938 aa2.26□□□□□ -2.05
RNU6-539P-201ENST00000516665 ERVH48-1M5A8F1 160 aa2.25□□□□□ -2.05
RNU6-539P-201ENST00000516665 ANKLE2Q86XL3 938 aa2.25□□□□□ -2.05
RNU6-539P-201ENST00000516665 PITPNM2Q9BZ72 1349 aa2.24□□□□□ -2.05
RNU6-539P-201ENST00000516665 ADARB2-AS1A8MUL3 147 aa2.24□□□□□ -2.05
RNU6-539P-201ENST00000516665 LILRB5O75023 590 aa2.24□□□□□ -2.05
RNU6-539P-201ENST00000516665 SKIP12755 728 aa2.24□□□□□ -2.05
RNU6-539P-201ENST00000516665 TNP2Q05952 138 aa2.24□□□□□ -2.05
RNU6-539P-201ENST00000516665 PUM1Q14671 1186 aaKnown RBP eCLIP2.24□□□□□ -2.05
RNU6-539P-201ENST00000516665 NLRP3Q96P20 1036 aa2.24□□□□□ -2.05
RNU6-539P-201ENST00000516665 ATXN7O15265 892 aaPredicted RBP2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 MSMPQ1L6U9 139 aa2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 FIGNL1Q6PIW4 674 aa2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 VSIG10LQ86VR7 867 aa2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 DMRTC2Q8IXT2 367 aaPredicted RBP2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 SHKBP1Q8TBC3 707 aa2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 TMEM40Q8WWA1 233 aa2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 ZSCAN10Q96SZ4 725 aaPredicted RBP2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 DBNDD2Q9BQY9 259 aa2.23□□□□□ -2.05
RNU6-539P-201ENST00000516665 BIN1O00499 593 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 KHNYNO15037 678 aaKnown RBP2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 PRNPP04156 253 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 INSRRP14616 1297 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 HIC1Q14526 733 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 CRISPLD1Q9H336 500 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 C7orf69Q9H7B7 122 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 AKTIPQ9H8T0 292 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 STRN4Q9NRL3 753 aa2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 CDV3Q9UKY7 258 aaKnown RBP2.22□□□□□ -2.05
RNU6-539P-201ENST00000516665 ADH7P40394 386 aa2.21□□□□□ -2.06
RNU6-539P-201ENST00000516665 CRB2Q5IJ48 1285 aa2.21□□□□□ -2.06
RNU6-539P-201ENST00000516665 RNF43Q68DV7 783 aa2.21□□□□□ -2.06
RNU6-539P-201ENST00000516665 ILDR2Q71H61 639 aa2.21□□□□□ -2.06
RNU6-539P-201ENST00000516665 TRIM42Q8IWZ5 723 aa2.21□□□□□ -2.06
RNU6-539P-201ENST00000516665 PAK6Q9NQU5 681 aaPredicted RBP2.21□□□□□ -2.06
RNU6-539P-201ENST00000516665 HMX2A2RU54 273 aa2.2□□□□□ -2.06
RNU6-539P-201ENST00000516665 LRRC10BA6NIK2 292 aa2.2□□□□□ -2.06
RNU6-539P-201ENST00000516665 SIN3BO75182 1162 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms