RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 GNASQ5JWF2 1037 aa10.85□□□□□ -0.67
PDE4D-225ENST00000515835 HINFPQ9BQA5 517 aa10.85□□□□□ -0.67
PDE4D-225ENST00000515835 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
PDE4D-225ENST00000515835 POTECB2RU33 542 aa10.84□□□□□ -0.67
PDE4D-225ENST00000515835 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
PDE4D-225ENST00000515835 PRICKLE2Q7Z3G6 844 aa10.84□□□□□ -0.67
PDE4D-225ENST00000515835 RHBDD1Q8TEB9 315 aa10.84□□□□□ -0.67
PDE4D-225ENST00000515835 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
PDE4D-225ENST00000515835 URB2Q14146 1524 aaKnown RBP10.83□□□□□ -0.68
PDE4D-225ENST00000515835 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
PDE4D-225ENST00000515835 TAS1R3Q7RTX0 852 aa10.82□□□□□ -0.68
PDE4D-225ENST00000515835 SLC9A9Q8IVB4 645 aa10.82□□□□□ -0.68
PDE4D-225ENST00000515835 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
PDE4D-225ENST00000515835 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
PDE4D-225ENST00000515835 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
PDE4D-225ENST00000515835 SOBPA7XYQ1 873 aa10.81□□□□□ -0.68
PDE4D-225ENST00000515835 PDE4CQ08493 712 aa10.81□□□□□ -0.68
PDE4D-225ENST00000515835 POU4F2Q12837 409 aa10.81□□□□□ -0.68
PDE4D-225ENST00000515835 ZNF295-AS1Q8N0V1 137 aa10.81□□□□□ -0.68
PDE4D-225ENST00000515835 CLP1Q92989 425 aaKnown RBP10.81□□□□□ -0.68
PDE4D-225ENST00000515835 TSPAN10Q9H1Z9 355 aaPredicted RBP10.81□□□□□ -0.68
PDE4D-225ENST00000515835 USP3Q9Y6I4 520 aa10.81□□□□□ -0.68
PDE4D-225ENST00000515835 C4orf17Q53FE4 359 aa10.8□□□□□ -0.68
PDE4D-225ENST00000515835 ZNF787Q6DD87 383 aa10.8□□□□□ -0.68
PDE4D-225ENST00000515835 RETREG2Q8NC44 543 aa10.8□□□□□ -0.68
PDE4D-225ENST00000515835 RHOQP17081 205 aa10.79□□□□□ -0.68
PDE4D-225ENST00000515835 IGFBP4P22692 258 aa10.79□□□□□ -0.68
PDE4D-225ENST00000515835 WEE1P30291 646 aa10.79□□□□□ -0.68
PDE4D-225ENST00000515835 TEAD4Q15561 434 aa10.79□□□□□ -0.68
PDE4D-225ENST00000515835 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
PDE4D-225ENST00000515835 ABCC8Q09428 1581 aa10.78□□□□□ -0.68
PDE4D-225ENST00000515835 C21orf2O43822 256 aa10.78□□□□□ -0.68
PDE4D-225ENST00000515835 PSMA6P60900 246 aaKnown RBP10.78□□□□□ -0.68
PDE4D-225ENST00000515835 STAG2Q8N3U4 1231 aa10.78□□□□□ -0.68
PDE4D-225ENST00000515835 SCG3Q8WXD2 468 aaKnown RBP10.78□□□□□ -0.68
PDE4D-225ENST00000515835 CABP1Q9NZU7 370 aa10.78□□□□□ -0.68
PDE4D-225ENST00000515835 PTSQ03393 145 aa10.77□□□□□ -0.69
PDE4D-225ENST00000515835 TBCELQ5QJ74 424 aa10.77□□□□□ -0.69
PDE4D-225ENST00000515835 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.69
PDE4D-225ENST00000515835 PPP1R12BO60237 982 aaPredicted RBP10.76□□□□□ -0.69
PDE4D-225ENST00000515835 POTEAQ6S8J7 498 aa10.76□□□□□ -0.69
PDE4D-225ENST00000515835 TIMMDC1Q9NPL8 285 aa10.76□□□□□ -0.69
PDE4D-225ENST00000515835 DYRK1BQ9Y463 629 aa10.76□□□□□ -0.69
PDE4D-225ENST00000515835 IFT140Q96RY7 1462 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 SERTM1A2A2V5 107 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 LGR5O75473 907 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 NOS2P35228 1153 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 PHKA2P46019 1235 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 PLA2G4AP47712 749 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 OCLNQ16625 522 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 ZDHHC1Q8WTX9 485 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 PRDM2Q13029 1718 aa10.75□□□□□ -0.69
PDE4D-225ENST00000515835 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
PDE4D-225ENST00000515835 A0A1B0GTH6 734 aa10.74□□□□□ -0.69
PDE4D-225ENST00000515835 SLC35F4A4IF30 521 aa10.74□□□□□ -0.69
PDE4D-225ENST00000515835 FOXO3O43524 673 aa10.74□□□□□ -0.69
PDE4D-225ENST00000515835 PRMT3O60678 531 aa10.74□□□□□ -0.69
PDE4D-225ENST00000515835 HIRAP54198 1017 aaPredicted RBP10.74□□□□□ -0.69
PDE4D-225ENST00000515835 L3MBTL2Q969R5 705 aa10.74□□□□□ -0.69
PDE4D-225ENST00000515835 PRIMPOLQ96LW4 560 aa10.74□□□□□ -0.69
PDE4D-225ENST00000515835 EML1O00423 815 aa10.73□□□□□ -0.69
PDE4D-225ENST00000515835 C2orf49Q9BVC5 232 aaPredicted RBP10.73□□□□□ -0.69
PDE4D-225ENST00000515835 CXXC1Q9P0U4 656 aaPredicted RBP10.73□□□□□ -0.69
PDE4D-225ENST00000515835 SLAIN2Q9P270 581 aa10.73□□□□□ -0.69
PDE4D-225ENST00000515835 ZNF232Q9UNY5 417 aa10.73□□□□□ -0.69
PDE4D-225ENST00000515835 TOPBP1Q92547 1522 aa10.73□□□□□ -0.69
PDE4D-225ENST00000515835 ATP2B4P23634 1241 aa10.72□□□□□ -0.69
PDE4D-225ENST00000515835 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
PDE4D-225ENST00000515835 CCDC155Q8N6L0 562 aa10.72□□□□□ -0.69
PDE4D-225ENST00000515835 C1orf216Q8TAB5 229 aa10.72□□□□□ -0.69
PDE4D-225ENST00000515835 CHMP7Q8WUX9 453 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-225ENST00000515835 ZDHHC3Q9NYG2 299 aa10.72□□□□□ -0.69
PDE4D-225ENST00000515835 CARNS1A5YM72 827 aa10.71□□□□□ -0.69
PDE4D-225ENST00000515835 PARP3Q9Y6F1 533 aa10.71□□□□□ -0.69
PDE4D-225ENST00000515835 F11P03951 625 aa10.7□□□□□ -0.7
PDE4D-225ENST00000515835 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
PDE4D-225ENST00000515835 AIDAQ96BJ3 306 aa10.7□□□□□ -0.7
PDE4D-225ENST00000515835 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
PDE4D-225ENST00000515835 SSFA2P28290 1259 aa10.69□□□□□ -0.7
PDE4D-225ENST00000515835 MSX1P28360 303 aa10.69□□□□□ -0.7
PDE4D-225ENST00000515835 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
PDE4D-225ENST00000515835 SH3PXD2AQ5TCZ1 1133 aa10.69□□□□□ -0.7
PDE4D-225ENST00000515835 C1orf53Q5VUE5 145 aa10.69□□□□□ -0.7
PDE4D-225ENST00000515835 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
PDE4D-225ENST00000515835 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
PDE4D-225ENST00000515835 COL26A1Q96A83 441 aa10.68□□□□□ -0.7
PDE4D-225ENST00000515835 VTI1AQ96AJ9 217 aa10.68□□□□□ -0.7
PDE4D-225ENST00000515835 GAS2L1Q99501 681 aaPredicted RBP10.68□□□□□ -0.7
PDE4D-225ENST00000515835 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.68□□□□□ -0.72e-6■■■■■ 96.1
PDE4D-225ENST00000515835 NXF1Q9UBU9 619 aaKnown RBP10.68□□□□□ -0.7
PDE4D-225ENST00000515835 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
PDE4D-225ENST00000515835 ATP4AP20648 1035 aa10.67□□□□□ -0.7
PDE4D-225ENST00000515835 TXLNAP40222 546 aa10.67□□□□□ -0.7
PDE4D-225ENST00000515835 GPC6Q9Y625 555 aaPredicted RBP10.67□□□□□ -0.7
PDE4D-225ENST00000515835 ZNF608Q9ULD9 1512 aaPredicted RBP10.67□□□□□ -0.7
PDE4D-225ENST00000515835 ITGA6P23229 1130 aa10.66□□□□□ -0.7
PDE4D-225ENST00000515835 HCN4Q9Y3Q4 1203 aa10.66□□□□□ -0.7
PDE4D-225ENST00000515835 PTCD1O75127 700 aaKnown RBP10.65□□□□□ -0.7
PDE4D-225ENST00000515835 ALDH16A1Q8IZ83 802 aa10.65□□□□□ -0.7
PDE4D-225ENST00000515835 GMCL1Q96IK5 515 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms