RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
SERF1B-208ENST00000515588 STARD3NLO95772 234 aa20.81■□□□□ 0.92
SERF1B-208ENST00000515588 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
SERF1B-208ENST00000515588 NLGN2Q8NFZ4 835 aa20.81■□□□□ 0.92
SERF1B-208ENST00000515588 PRAMEF22A3QJZ6 481 aa20.8■□□□□ 0.92
SERF1B-208ENST00000515588 MMP10P09238 476 aa20.8■□□□□ 0.92
SERF1B-208ENST00000515588 TMPOP42166 694 aaKnown RBP20.8■□□□□ 0.92
SERF1B-208ENST00000515588 RIPK4P57078 832 aa20.8■□□□□ 0.92
SERF1B-208ENST00000515588 USP42Q9H9J4 1324 aaKnown RBP20.79■□□□□ 0.92
SERF1B-208ENST00000515588 CANXP27824 592 aaKnown RBP20.79■□□□□ 0.92
SERF1B-208ENST00000515588 NLGN1Q8N2Q7 840 aa20.79■□□□□ 0.92
SERF1B-208ENST00000515588 TEX13AQ9BXU3 409 aaPredicted RBP20.79■□□□□ 0.92
SERF1B-208ENST00000515588 RRP7AQ9Y3A4 280 aaKnown RBP20.79■□□□□ 0.92
SERF1B-208ENST00000515588 FKBP8Q14318 412 aa20.78■□□□□ 0.92
SERF1B-208ENST00000515588 RUNDC1Q96C34 613 aa20.78■□□□□ 0.92
SERF1B-208ENST00000515588 USP16Q9Y5T5 823 aa20.78■□□□□ 0.92
SERF1B-208ENST00000515588 COL15A1P39059 1388 aa20.77■□□□□ 0.92
SERF1B-208ENST00000515588 A1BGP04217 495 aa20.77■□□□□ 0.92
SERF1B-208ENST00000515588 CD2APQ9Y5K6 639 aa20.77■□□□□ 0.92
SERF1B-208ENST00000515588 EIF5P55010 431 aaKnown RBP20.76■□□□□ 0.91
SERF1B-208ENST00000515588 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
SERF1B-208ENST00000515588 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
SERF1B-208ENST00000515588 USPL1Q5W0Q7 1092 aa20.75■□□□□ 0.91
SERF1B-208ENST00000515588 PNISRQ8TF01 805 aaKnown RBP20.75■□□□□ 0.91
SERF1B-208ENST00000515588 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
SERF1B-208ENST00000515588 TRIM35Q9UPQ4 493 aa20.74■□□□□ 0.91
SERF1B-208ENST00000515588 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
SERF1B-208ENST00000515588 ZPR1O75312 459 aa20.73■□□□□ 0.91
SERF1B-208ENST00000515588 BCL2L12Q9HB09 334 aa20.73■□□□□ 0.91
SERF1B-208ENST00000515588 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
SERF1B-208ENST00000515588 ANP32CO43423 234 aa20.72■□□□□ 0.91
SERF1B-208ENST00000515588 IL6STP40189 918 aaPredicted RBP20.72■□□□□ 0.91
SERF1B-208ENST00000515588 PIP4K2AP48426 406 aaPredicted RBP20.72■□□□□ 0.91
SERF1B-208ENST00000515588 EIF4A1P60842 406 aaKnown RBP20.72■□□□□ 0.91
SERF1B-208ENST00000515588 DDR1Q08345 913 aa20.72■□□□□ 0.91
SERF1B-208ENST00000515588 LMOD3Q0VAK6 560 aa20.72■□□□□ 0.91
SERF1B-208ENST00000515588 TM4SF1P30408 202 aa20.71■□□□□ 0.91
SERF1B-208ENST00000515588 GIGYF1O75420 1035 aaPredicted RBP20.7■□□□□ 0.9
SERF1B-208ENST00000515588 PARP3Q9Y6F1 533 aa20.7■□□□□ 0.9
SERF1B-208ENST00000515588 A0A087WZG4 1122 aa20.69■□□□□ 0.9
SERF1B-208ENST00000515588 NBPF26B4DH59 902 aa20.69■□□□□ 0.9
SERF1B-208ENST00000515588 APAF1O14727 1248 aa20.69■□□□□ 0.9
SERF1B-208ENST00000515588 NBPF10Q6P3W6 841 aaKnown RBP20.69■□□□□ 0.9
SERF1B-208ENST00000515588 NBPF15Q8N660 670 aa20.69■□□□□ 0.9
SERF1B-208ENST00000515588 TSPYL4Q9UJ04 414 aa20.69■□□□□ 0.9
SERF1B-208ENST00000515588 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
SERF1B-208ENST00000515588 ZNF330Q9Y3S2 320 aaPredicted RBP20.69■□□□□ 0.9
SERF1B-208ENST00000515588 POLRMTO00411 1230 aaKnown RBP20.68■□□□□ 0.9
SERF1B-208ENST00000515588 NFIXQ14938 502 aa20.68■□□□□ 0.9
SERF1B-208ENST00000515588 GPR162Q16538 588 aa20.68■□□□□ 0.9
SERF1B-208ENST00000515588 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
SERF1B-208ENST00000515588 YBX3P16989 372 aaKnown RBP eCLIP20.67■□□□□ 0.9
SERF1B-208ENST00000515588 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
SERF1B-208ENST00000515588 MRS2Q9HD23 443 aa20.66■□□□□ 0.9
SERF1B-208ENST00000515588 BABAM1Q9NWV8 329 aa20.66■□□□□ 0.9
SERF1B-208ENST00000515588 CHL1O00533 1208 aa20.65■□□□□ 0.9
SERF1B-208ENST00000515588 CAMTA2O94983 1202 aa20.65■□□□□ 0.9
SERF1B-208ENST00000515588 KIF13BQ9NQT8 1826 aa20.64■□□□□ 0.9
SERF1B-208ENST00000515588 PXDNLA1KZ92 1463 aa20.64■□□□□ 0.89
SERF1B-208ENST00000515588 TBC1D9BQ66K14 1250 aa20.63■□□□□ 0.89
SERF1B-208ENST00000515588 DZIP3Q86Y13 1208 aaKnown RBP20.63■□□□□ 0.89
SERF1B-208ENST00000515588 WWC3Q9ULE0 1092 aa20.63■□□□□ 0.89
SERF1B-208ENST00000515588 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
SERF1B-208ENST00000515588 KIAA1551Q9HCM1 1747 aa20.62■□□□□ 0.89
SERF1B-208ENST00000515588 SCN7AQ01118 1682 aa20.62■□□□□ 0.89
SERF1B-208ENST00000515588 TGFB2P61812 414 aa20.62■□□□□ 0.89
SERF1B-208ENST00000515588 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
SERF1B-208ENST00000515588 A0A0G2JLW4 131 aa20.61■□□□□ 0.89
SERF1B-208ENST00000515588 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
SERF1B-208ENST00000515588 LAS1LQ9Y4W2 734 aaKnown RBP20.61■□□□□ 0.89
SERF1B-208ENST00000515588 SERPINB2P05120 415 aa20.6■□□□□ 0.89
SERF1B-208ENST00000515588 DPEP1P16444 411 aa20.6■□□□□ 0.89
SERF1B-208ENST00000515588 YY1P25490 414 aa20.6■□□□□ 0.89
SERF1B-208ENST00000515588 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
SERF1B-208ENST00000515588 SENP3-EIF4A1A0A087X0R7 540 aa20.59■□□□□ 0.89
SERF1B-208ENST00000515588 KCNA3P22001 575 aa20.59■□□□□ 0.89
SERF1B-208ENST00000515588 N4BP2Q86UW6 1770 aaPredicted RBP20.59■□□□□ 0.89
SERF1B-208ENST00000515588 AFDNP55196 1824 aaKnown RBP20.58■□□□□ 0.89
SERF1B-208ENST00000515588 ZNF853P0CG23 659 aa20.58■□□□□ 0.89
SERF1B-208ENST00000515588 CFAP44Q96MT7 982 aa20.58■□□□□ 0.89
SERF1B-208ENST00000515588 NRXN2Q9P2S2 1712 aa20.58■□□□□ 0.88
SERF1B-208ENST00000515588 BCORQ6W2J9 1755 aa20.57■□□□□ 0.88
SERF1B-208ENST00000515588 GRIN3BO60391 1043 aa20.57■□□□□ 0.88
SERF1B-208ENST00000515588 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
SERF1B-208ENST00000515588 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
SERF1B-208ENST00000515588 MYL6BP14649 208 aa20.56■□□□□ 0.88
SERF1B-208ENST00000515588 CHRNA5P30532 468 aa20.56■□□□□ 0.88
SERF1B-208ENST00000515588 PDIA6Q15084 440 aa20.56■□□□□ 0.88
SERF1B-208ENST00000515588 TTLL7Q6ZT98 887 aa20.56■□□□□ 0.88
SERF1B-208ENST00000515588 LRP10Q7Z4F1 713 aa20.56■□□□□ 0.88
SERF1B-208ENST00000515588 MBIPQ9NS73 344 aa20.56■□□□□ 0.88
SERF1B-208ENST00000515588 CARMIL3Q8ND23 1372 aa20.56■□□□□ 0.88
SERF1B-208ENST00000515588 HLFQ16534 295 aa20.55■□□□□ 0.88
SERF1B-208ENST00000515588 PROSER3Q2NL68 480 aa20.55■□□□□ 0.88
SERF1B-208ENST00000515588 CLEC4GQ6UXB4 293 aa20.55■□□□□ 0.88
SERF1B-208ENST00000515588 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
SERF1B-208ENST00000515588 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
SERF1B-208ENST00000515588 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
SERF1B-208ENST00000515588 IFT57Q9NWB7 429 aa20.54■□□□□ 0.88
SERF1B-208ENST00000515588 RGL2O15211 777 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms