RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 COL5A3P25940 1745 aaPredicted RBP19.59■□□□□ 0.73
PDCD6-211ENST00000515587 ZNF853P0CG23 659 aa19.59■□□□□ 0.73
PDCD6-211ENST00000515587 C4BP0C0L5 1744 aa19.59■□□□□ 0.73
PDCD6-211ENST00000515587 SNRPA1P09661 255 aaKnown RBP19.58■□□□□ 0.72
PDCD6-211ENST00000515587 ITPK1Q13572 414 aa19.58■□□□□ 0.72
PDCD6-211ENST00000515587 SLC4A9Q96Q91 983 aa19.58■□□□□ 0.72
PDCD6-211ENST00000515587 EIF4A1P60842 406 aaKnown RBP19.57■□□□□ 0.72
PDCD6-211ENST00000515587 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
PDCD6-211ENST00000515587 MBIPQ9NS73 344 aa19.57■□□□□ 0.72
PDCD6-211ENST00000515587 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
PDCD6-211ENST00000515587 STARD3NLO95772 234 aa19.56■□□□□ 0.72
PDCD6-211ENST00000515587 GOLGA2Q08379 1002 aa19.56■□□□□ 0.72
PDCD6-211ENST00000515587 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
PDCD6-211ENST00000515587 DNAJC10Q8IXB1 793 aa19.56■□□□□ 0.72
PDCD6-211ENST00000515587 LINC00116Q8NCU8 138 aa19.56■□□□□ 0.72
PDCD6-211ENST00000515587 NLGN2Q8NFZ4 835 aa19.56■□□□□ 0.72
PDCD6-211ENST00000515587 AK7Q96M32 723 aa19.56■□□□□ 0.72
PDCD6-211ENST00000515587 GOLGB1Q14789 3259 aaKnown RBP19.56■□□□□ 0.72
PDCD6-211ENST00000515587 ZNF521Q96K83 1311 aa19.55■□□□□ 0.72
PDCD6-211ENST00000515587 HSPA6P17066 643 aa19.55■□□□□ 0.72
PDCD6-211ENST00000515587 CNTNAP4Q9C0A0 1308 aa19.53■□□□□ 0.72
PDCD6-211ENST00000515587 ATP10DQ9P241 1426 aa19.53■□□□□ 0.72
PDCD6-211ENST00000515587 YBX3P16989 372 aaKnown RBP eCLIP19.53■□□□□ 0.728e-11■□□□□ 8.3
PDCD6-211ENST00000515587 RC3H1Q5TC82 1133 aaKnown RBP19.53■□□□□ 0.72
PDCD6-211ENST00000515587 TSR2Q969E8 191 aaKnown RBP19.53■□□□□ 0.72
PDCD6-211ENST00000515587 TFCP2L1Q9NZI6 479 aa19.53■□□□□ 0.72
PDCD6-211ENST00000515587 QSER1Q2KHR3 1735 aa19.53■□□□□ 0.72
PDCD6-211ENST00000515587 E9PSI1 815 aa19.52■□□□□ 0.72
PDCD6-211ENST00000515587 CYP19A1P11511 503 aaPredicted RBP19.52■□□□□ 0.72
PDCD6-211ENST00000515587 CRKLP46109 303 aaKnown RBP19.52■□□□□ 0.72
PDCD6-211ENST00000515587 AKT1S1Q96B36 256 aa19.52■□□□□ 0.72
PDCD6-211ENST00000515587 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
PDCD6-211ENST00000515587 MYH14Q7Z406 1995 aaKnown RBP19.52■□□□□ 0.71
PDCD6-211ENST00000515587 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
PDCD6-211ENST00000515587 UBR3Q6ZT12 1888 aa19.51■□□□□ 0.71
PDCD6-211ENST00000515587 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
PDCD6-211ENST00000515587 GNPATO15228 680 aa19.5■□□□□ 0.71
PDCD6-211ENST00000515587 CHMP4AQ9BY43 222 aa19.5■□□□□ 0.71
PDCD6-211ENST00000515587 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
PDCD6-211ENST00000515587 PRAMEF22A3QJZ6 481 aa19.49■□□□□ 0.71
PDCD6-211ENST00000515587 HOXB7P09629 217 aa19.49■□□□□ 0.71
PDCD6-211ENST00000515587 POLD1P28340 1107 aa19.49■□□□□ 0.71
PDCD6-211ENST00000515587 FLAD1Q8NFF5 587 aa19.49■□□□□ 0.71
PDCD6-211ENST00000515587 RTCBQ9Y3I0 505 aaKnown RBP19.49■□□□□ 0.71
PDCD6-211ENST00000515587 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
PDCD6-211ENST00000515587 SOS1Q07889 1333 aaPredicted RBP19.49■□□□□ 0.71
PDCD6-211ENST00000515587 DUSP27Q5VZP5 1158 aa19.48■□□□□ 0.71
PDCD6-211ENST00000515587 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
PDCD6-211ENST00000515587 GPBP1L1Q9HC44 474 aaPredicted RBP19.48■□□□□ 0.71
PDCD6-211ENST00000515587 SPINK5Q9NQ38 1064 aaPredicted RBP19.48■□□□□ 0.71
PDCD6-211ENST00000515587 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
PDCD6-211ENST00000515587 RPS6KA4O75676 772 aa19.47■□□□□ 0.71
PDCD6-211ENST00000515587 EIF2S2P20042 333 aaKnown RBP19.47■□□□□ 0.71
PDCD6-211ENST00000515587 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
PDCD6-211ENST00000515587 SLFN5Q08AF3 891 aa19.47■□□□□ 0.71
PDCD6-211ENST00000515587 KRT24Q2M2I5 525 aa19.47■□□□□ 0.71
PDCD6-211ENST00000515587 INTS5Q6P9B9 1019 aaKnown RBP19.47■□□□□ 0.71
PDCD6-211ENST00000515587 MSH5O43196 834 aa19.46■□□□□ 0.71
PDCD6-211ENST00000515587 PHF14O94880 888 aa19.46■□□□□ 0.71
PDCD6-211ENST00000515587 A1BGP04217 495 aa19.46■□□□□ 0.71
PDCD6-211ENST00000515587 SSFA2P28290 1259 aa19.46■□□□□ 0.71
PDCD6-211ENST00000515587 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
PDCD6-211ENST00000515587 ZNF526Q8TF50 670 aaPredicted RBP19.46■□□□□ 0.71
PDCD6-211ENST00000515587 ELL2O00472 640 aaPredicted RBP19.45■□□□□ 0.7
PDCD6-211ENST00000515587 ADRA2BP18089 450 aa19.45■□□□□ 0.7
PDCD6-211ENST00000515587 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
PDCD6-211ENST00000515587 HDGFL1Q5TGJ6 251 aa19.45■□□□□ 0.7
PDCD6-211ENST00000515587 SLC16A10Q8TF71 515 aa19.45■□□□□ 0.7
PDCD6-211ENST00000515587 CDCA7LQ96GN5 454 aa19.45■□□□□ 0.7
PDCD6-211ENST00000515587 ZBTB1Q9Y2K1 713 aa19.45■□□□□ 0.7
PDCD6-211ENST00000515587 ERBB4Q15303 1308 aa19.45■□□□□ 0.7
PDCD6-211ENST00000515587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
PDCD6-211ENST00000515587 EXOSC9Q06265 439 aaKnown RBP19.44■□□□□ 0.7
PDCD6-211ENST00000515587 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
PDCD6-211ENST00000515587 ZNF330Q9Y3S2 320 aaPredicted RBP19.44■□□□□ 0.7
PDCD6-211ENST00000515587 A0A087WZG4 1122 aa19.43■□□□□ 0.7
PDCD6-211ENST00000515587 IL6STP40189 918 aaPredicted RBP19.43■□□□□ 0.7
PDCD6-211ENST00000515587 PNPLA7Q6ZV29 1317 aa19.43■□□□□ 0.7
PDCD6-211ENST00000515587 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
PDCD6-211ENST00000515587 YTHDC1Q96MU7 727 aaKnown RBP19.42■□□□□ 0.7
PDCD6-211ENST00000515587 COL15A1P39059 1388 aa19.42■□□□□ 0.7
PDCD6-211ENST00000515587 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
PDCD6-211ENST00000515587 RFC4P35249 363 aa19.41■□□□□ 0.7
PDCD6-211ENST00000515587 CCDC30Q5VVM6 783 aa19.41■□□□□ 0.7
PDCD6-211ENST00000515587 TRMT2AQ8IZ69 625 aaKnown RBP19.41■□□□□ 0.7
PDCD6-211ENST00000515587 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
PDCD6-211ENST00000515587 CACNA1FO60840 1977 aa19.41■□□□□ 0.7
PDCD6-211ENST00000515587 MYL6BP14649 208 aa19.4■□□□□ 0.7
PDCD6-211ENST00000515587 PIP4K2AP48426 406 aaPredicted RBP19.4■□□□□ 0.7
PDCD6-211ENST00000515587 EIF5P55010 431 aaKnown RBP19.4■□□□□ 0.7
PDCD6-211ENST00000515587 COL23A1Q86Y22 540 aaPredicted RBP19.4■□□□□ 0.7
PDCD6-211ENST00000515587 DBF4Q9UBU7 674 aaPredicted RBP19.4■□□□□ 0.7
PDCD6-211ENST00000515587 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
PDCD6-211ENST00000515587 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
PDCD6-211ENST00000515587 SMIM5Q71RC9 77 aa19.39■□□□□ 0.69
PDCD6-211ENST00000515587 AMIGO3Q86WK7 504 aa19.39■□□□□ 0.69
PDCD6-211ENST00000515587 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
PDCD6-211ENST00000515587 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.69
PDCD6-211ENST00000515587 STK31Q9BXU1 1019 aa19.39■□□□□ 0.69
PDCD6-211ENST00000515587 DDX21Q9NR30 783 aaKnown RBP eCLIP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms